RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 ABCC12Q96J65 1359 aa13.44□□□□□ -0.26
SMARCA4-217ENST00000591595 MYH15Q9Y2K3 1946 aa13.44□□□□□ -0.26
SMARCA4-217ENST00000591595 KRT38O76015 456 aa13.44□□□□□ -0.26
SMARCA4-217ENST00000591595 KCTD16Q68DU8 428 aa13.44□□□□□ -0.26
SMARCA4-217ENST00000591595 STAMQ92783 540 aa13.44□□□□□ -0.26
SMARCA4-217ENST00000591595 HVCN1Q96D96 273 aa13.44□□□□□ -0.26
SMARCA4-217ENST00000591595 GMEB1Q9Y692 573 aa13.44□□□□□ -0.26
SMARCA4-217ENST00000591595 SYNRGQ9UMZ2 1314 aa13.44□□□□□ -0.26
SMARCA4-217ENST00000591595 KAT6BQ8WYB5 2073 aa13.44□□□□□ -0.26
SMARCA4-217ENST00000591595 ADAMTS7Q9UKP4 1686 aa13.44□□□□□ -0.26
SMARCA4-217ENST00000591595 FAM237AA0A1B0GTK4 181 aa13.44□□□□□ -0.26
SMARCA4-217ENST00000591595 TARSL2A2RTX5 802 aaKnown RBP13.44□□□□□ -0.26
SMARCA4-217ENST00000591595 TEX33O43247 280 aa13.44□□□□□ -0.26
SMARCA4-217ENST00000591595 GFPT2O94808 682 aa13.44□□□□□ -0.26
SMARCA4-217ENST00000591595 SLC5A1P13866 664 aa13.44□□□□□ -0.26
SMARCA4-217ENST00000591595 ALOX15P16050 662 aaPredicted RBP13.44□□□□□ -0.26
SMARCA4-217ENST00000591595 FUT4P22083 530 aa13.44□□□□□ -0.26
SMARCA4-217ENST00000591595 PUM3Q15397 648 aaKnown RBP13.44□□□□□ -0.26
SMARCA4-217ENST00000591595 PKN1Q16512 942 aa13.44□□□□□ -0.26
SMARCA4-217ENST00000591595 ANKRD20A2Q5SQ80 823 aa13.44□□□□□ -0.26
SMARCA4-217ENST00000591595 ANKRD20A1Q5TYW2 823 aa13.44□□□□□ -0.26
SMARCA4-217ENST00000591595 ANKRD20A3Q5VUR7 823 aa13.44□□□□□ -0.26
SMARCA4-217ENST00000591595 KDM7AQ6ZMT4 941 aa13.44□□□□□ -0.26
SMARCA4-217ENST00000591595 SMYD4Q8IYR2 804 aaPredicted RBP13.44□□□□□ -0.26
SMARCA4-217ENST00000591595 NDNQ99608 321 aa13.44□□□□□ -0.26
SMARCA4-217ENST00000591595 ATP8A1Q9Y2Q0 1164 aa13.44□□□□□ -0.26
SMARCA4-217ENST00000591595 EVI5O60447 810 aa13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 PENKP01210 267 aaPredicted RBP13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 VIMP08670 466 aaKnown RBP13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 TUBP50607 506 aa13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 RHBDL3P58872 404 aa13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 ADAM9Q13443 819 aa13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 KIAA0753Q2KHM9 967 aa13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 LPIN2Q92539 896 aa13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 ZNHIT6Q9NWK9 470 aaKnown RBP13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 ABCF2Q9UG63 623 aa13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 MAP3K15Q6ZN16 1313 aa13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 TRIM75PA6NK02 468 aa13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 ABLIM1O14639 778 aa13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 COBLO75128 1261 aa13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 PSMC4P43686 418 aa13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 MRPS35P82673 323 aaKnown RBP13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 TAF11Q15544 211 aa13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 BICDL1Q6ZP65 573 aa13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 SND1Q7KZF4 910 aaKnown RBP eCLIP13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 PLA2G12BQ9BX93 195 aa13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 FOXP1Q9H334 677 aaPredicted RBP13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 VPS54Q9P1Q0 977 aa13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 FAM184BQ9ULE4 1060 aa13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 TMCO1Q9UM00 188 aa13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 PFDN1O60925 122 aa13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 FAM200BP0CF97 657 aa13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 PLCD1P51178 756 aa13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 BPIFB4P59827 614 aa13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 MDM2Q00987 491 aaPredicted RBP13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 MORC3Q14149 939 aa13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 TRIM68Q6AZZ1 485 aa13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 CCNI2Q6ZMN8 369 aaPredicted RBP13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 NAF1Q96HR8 494 aaKnown RBP13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 EPSTI1Q96J88 318 aa13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 FRMD4BQ9Y2L6 1034 aa13.43□□□□□ -0.26
SMARCA4-217ENST00000591595 A0A0U1RQJ8 604 aa13.42□□□□□ -0.26
SMARCA4-217ENST00000591595 CCT6AP40227 531 aaKnown RBP13.42□□□□□ -0.26
SMARCA4-217ENST00000591595 STAT6P42226 847 aa13.42□□□□□ -0.26
SMARCA4-217ENST00000591595 NNTQ13423 1086 aa13.42□□□□□ -0.26
SMARCA4-217ENST00000591595 RASGRF1Q13972 1273 aa13.42□□□□□ -0.26
SMARCA4-217ENST00000591595 MEX3CQ5U5Q3 659 aaKnown RBP13.42□□□□□ -0.26
SMARCA4-217ENST00000591595 MAATS1Q7Z4T9 603 aa13.42□□□□□ -0.26
SMARCA4-217ENST00000591595 ZNF654Q8IZM8 581 aa13.42□□□□□ -0.26
SMARCA4-217ENST00000591595 FANCBQ8NB91 859 aa13.42□□□□□ -0.26
SMARCA4-217ENST00000591595 P3H4Q92791 437 aa13.42□□□□□ -0.26
SMARCA4-217ENST00000591595 JAKMIP2Q96AA8 810 aa13.42□□□□□ -0.26
SMARCA4-217ENST00000591595 IWS1Q96ST2 819 aa13.42□□□□□ -0.26
SMARCA4-217ENST00000591595 BARX2Q9UMQ3 279 aaPredicted RBP13.42□□□□□ -0.26
SMARCA4-217ENST00000591595 SPATA31A3Q5VYP0 1347 aa13.42□□□□□ -0.26
SMARCA4-217ENST00000591595 STK36Q9NRP7 1315 aa13.42□□□□□ -0.26
SMARCA4-217ENST00000591595 PALM3A6NDB9 673 aaPredicted RBP13.42□□□□□ -0.26
SMARCA4-217ENST00000591595 TMCC1O94876 653 aa13.42□□□□□ -0.26
SMARCA4-217ENST00000591595 ZNF18P17022 549 aa13.42□□□□□ -0.26
SMARCA4-217ENST00000591595 RBL2Q08999 1139 aa13.42□□□□□ -0.26
SMARCA4-217ENST00000591595 TBX2Q13207 712 aaPredicted RBP13.42□□□□□ -0.26
SMARCA4-217ENST00000591595 LCORLQ8N3X6 602 aa13.42□□□□□ -0.26
SMARCA4-217ENST00000591595 CRACR2BQ8N4Y2 399 aaPredicted RBP13.42□□□□□ -0.26
SMARCA4-217ENST00000591595 TRIML1Q8N9V2 468 aa13.42□□□□□ -0.26
SMARCA4-217ENST00000591595 CCDC63Q8NA47 563 aa13.42□□□□□ -0.26
SMARCA4-217ENST00000591595 HDAC7Q8WUI4 952 aa13.42□□□□□ -0.26
SMARCA4-217ENST00000591595 SRPRBQ9Y5M8 271 aaKnown RBP13.42□□□□□ -0.26
SMARCA4-217ENST00000591595 CAMTA1Q9Y6Y1 1673 aa13.42□□□□□ -0.26
SMARCA4-217ENST00000591595 RIC1Q4ADV7 1423 aa13.42□□□□□ -0.26
SMARCA4-217ENST00000591595 FAM205CA6NFA0 338 aa13.41□□□□□ -0.26
SMARCA4-217ENST00000591595 ALS2CLQ60I27 953 aa13.41□□□□□ -0.26
SMARCA4-217ENST00000591595 STAG2Q8N3U4 1231 aa13.41□□□□□ -0.26
SMARCA4-217ENST00000591595 GPCPD1Q9NPB8 672 aa13.41□□□□□ -0.26
SMARCA4-217ENST00000591595 PANK4Q9NVE7 773 aa13.41□□□□□ -0.26
SMARCA4-217ENST00000591595 GSG1L2A8MUP6 293 aa13.41□□□□□ -0.26
SMARCA4-217ENST00000591595 PDE8AO60658 829 aa13.41□□□□□ -0.26
SMARCA4-217ENST00000591595 PRDM1O75626 825 aa13.41□□□□□ -0.26
SMARCA4-217ENST00000591595 ZBTB8BQ8NAP8 495 aaPredicted RBP13.41□□□□□ -0.26
SMARCA4-217ENST00000591595 RNF41Q9H4P4 317 aaPredicted RBP13.41□□□□□ -0.26
SMARCA4-217ENST00000591595 PPANQ9NQ55 473 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms