RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 TACC3Q9Y6A5 838 aa14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 INO80B-WBP1J3KQ70 363 aa14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 PDIA3P30101 505 aaKnown RBP14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 STX2P32856 288 aa14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 ODR4Q5SWX8 454 aa14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 APOA5Q6Q788 366 aa14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 LRRC8AQ8IWT6 810 aa14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 CEP120Q8N960 986 aa14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 INO80BQ9C086 356 aaPredicted RBP14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 MYO1AQ9UBC5 1043 aa14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 CAPN9O14815 690 aa14.54□□□□□ -0.08
SMARCA4-216ENST00000591545 Q3C1V9 767 aa14.54□□□□□ -0.08
SMARCA4-216ENST00000591545 LONRF3Q496Y0 759 aa14.54□□□□□ -0.08
SMARCA4-216ENST00000591545 RUNDC3BQ96NL0 473 aa14.54□□□□□ -0.08
SMARCA4-216ENST00000591545 PIGSQ96S52 555 aa14.54□□□□□ -0.08
SMARCA4-216ENST00000591545 APOL6Q9BWW8 343 aa14.54□□□□□ -0.08
SMARCA4-216ENST00000591545 KLHL14Q9P2G3 628 aa14.54□□□□□ -0.08
SMARCA4-216ENST00000591545 PHBP35232 272 aa14.54□□□□□ -0.08
SMARCA4-216ENST00000591545 RNASELQ05823 741 aaKnown RBP14.54□□□□□ -0.08
SMARCA4-216ENST00000591545 SPATA1Q5VX52 437 aa14.54□□□□□ -0.08
SMARCA4-216ENST00000591545 ELMSAN1Q6PJG2 1045 aa14.54□□□□□ -0.08
SMARCA4-216ENST00000591545 EEPD1Q7L9B9 569 aa14.54□□□□□ -0.08
SMARCA4-216ENST00000591545 IQGAP1P46940 1657 aa14.54□□□□□ -0.08
SMARCA4-216ENST00000591545 ABCD1P33897 745 aa14.54□□□□□ -0.08
SMARCA4-216ENST00000591545 GNGT1P63211 74 aa14.54□□□□□ -0.08
SMARCA4-216ENST00000591545 ARHGAP44Q17R89 818 aa14.54□□□□□ -0.08
SMARCA4-216ENST00000591545 RABGGTAQ92696 567 aa14.54□□□□□ -0.08
SMARCA4-216ENST00000591545 METTL14Q9HCE5 456 aaKnown RBP14.54□□□□□ -0.08
SMARCA4-216ENST00000591545 FAM207AQ9NSI2 230 aaPredicted RBP14.54□□□□□ -0.08
SMARCA4-216ENST00000591545 ARMCX3Q9UH62 379 aaPredicted RBP14.54□□□□□ -0.08
SMARCA4-216ENST00000591545 RIPOR2Q9Y4F9 1068 aa14.54□□□□□ -0.08
SMARCA4-216ENST00000591545 BBOF1Q8ND07 529 aa14.54□□□□□ -0.08
SMARCA4-216ENST00000591545 LSM14BQ9BX40 385 aaKnown RBP14.54□□□□□ -0.08
SMARCA4-216ENST00000591545 PIH1D3Q9NQM4 214 aaKnown RBP14.54□□□□□ -0.08
SMARCA4-216ENST00000591545 TYW1Q9NV66 732 aaKnown RBP14.54□□□□□ -0.08
SMARCA4-216ENST00000591545 SLC8A1P32418 973 aa14.53□□□□□ -0.08
SMARCA4-216ENST00000591545 ADKP55263 362 aaKnown RBP14.53□□□□□ -0.08
SMARCA4-216ENST00000591545 KIAA1841Q6NSI8 718 aa14.53□□□□□ -0.08
SMARCA4-216ENST00000591545 ANKFY1Q9P2R3 1169 aa14.53□□□□□ -0.08
SMARCA4-216ENST00000591545 CACNB3P54284 484 aa14.53□□□□□ -0.08
SMARCA4-216ENST00000591545 GABPAQ06546 454 aa14.53□□□□□ -0.08
SMARCA4-216ENST00000591545 CDC37Q16543 378 aaPredicted RBP14.53□□□□□ -0.08
SMARCA4-216ENST00000591545 FAM26FQ5R3K3 315 aa14.53□□□□□ -0.08
SMARCA4-216ENST00000591545 CCDC89Q8N998 374 aa14.53□□□□□ -0.08
SMARCA4-216ENST00000591545 TDRD7Q8NHU6 1098 aaKnown RBP14.53□□□□□ -0.08
SMARCA4-216ENST00000591545 USP28Q96RU2 1077 aa14.53□□□□□ -0.08
SMARCA4-216ENST00000591545 RIMBP3CA6NJZ7 1639 aa14.53□□□□□ -0.08
SMARCA4-216ENST00000591545 RIMBP3BA6NNM3 1639 aa14.53□□□□□ -0.08
SMARCA4-216ENST00000591545 RIMBP3Q9UFD9 1639 aa14.53□□□□□ -0.08
SMARCA4-216ENST00000591545 POMGNT1Q8WZA1 660 aa14.53□□□□□ -0.08
SMARCA4-216ENST00000591545 TSC1Q92574 1164 aa14.53□□□□□ -0.08
SMARCA4-216ENST00000591545 PUS7LQ9H0K6 701 aaKnown RBP14.53□□□□□ -0.08
SMARCA4-216ENST00000591545 OSBPL3Q9H4L5 887 aa14.53□□□□□ -0.08
SMARCA4-216ENST00000591545 ZNRF3Q9ULT6 936 aa14.53□□□□□ -0.08
SMARCA4-216ENST00000591545 USTQ9Y2C2 406 aa14.53□□□□□ -0.08
SMARCA4-216ENST00000591545 DCAF4Q8WV16 495 aa14.53□□□□□ -0.08
SMARCA4-216ENST00000591545 CRAMP1Q96RY5 1269 aa14.53□□□□□ -0.08
SMARCA4-216ENST00000591545 RIC8AQ9NPQ8 531 aa14.53□□□□□ -0.08
SMARCA4-216ENST00000591545 HNRNPDLO14979 420 aaKnown RBP14.52□□□□□ -0.08
SMARCA4-216ENST00000591545 CEP170P1Q96L14 293 aa14.52□□□□□ -0.08
SMARCA4-216ENST00000591545 CAPS2Q9BXY5 557 aa14.52□□□□□ -0.08
SMARCA4-216ENST00000591545 KIDINS220Q9ULH0 1771 aa14.52□□□□□ -0.08
SMARCA4-216ENST00000591545 PSAPP07602 524 aa14.52□□□□□ -0.08
SMARCA4-216ENST00000591545 PTGDRQ13258 359 aa14.52□□□□□ -0.08
SMARCA4-216ENST00000591545 RNF207Q6ZRF8 634 aa14.52□□□□□ -0.08
SMARCA4-216ENST00000591545 METTL23Q86XA0 190 aa14.52□□□□□ -0.08
SMARCA4-216ENST00000591545 DGKHQ86XP1 1220 aa14.52□□□□□ -0.08
SMARCA4-216ENST00000591545 OSBP2Q969R2 916 aa14.52□□□□□ -0.08
SMARCA4-216ENST00000591545 VPS37BQ9H9H4 285 aa14.52□□□□□ -0.08
SMARCA4-216ENST00000591545 KIAA1024Q9UPX6 916 aa14.52□□□□□ -0.08
SMARCA4-216ENST00000591545 PTPRMP28827 1452 aa14.52□□□□□ -0.08
SMARCA4-216ENST00000591545 USP17L10C9JJH3 530 aa14.52□□□□□ -0.09
SMARCA4-216ENST00000591545 SH3BP5O60239 455 aa14.52□□□□□ -0.09
SMARCA4-216ENST00000591545 LRMPQ12912 555 aa14.52□□□□□ -0.09
SMARCA4-216ENST00000591545 USP17L2Q6R6M4 530 aa14.52□□□□□ -0.09
SMARCA4-216ENST00000591545 ISCA1Q9BUE6 129 aa14.52□□□□□ -0.09
SMARCA4-216ENST00000591545 PFDN4Q9NQP4 134 aa14.52□□□□□ -0.09
SMARCA4-216ENST00000591545 TPCN1Q9ULQ1 816 aa14.52□□□□□ -0.09
SMARCA4-216ENST00000591545 CYP21A2P08686 494 aa14.52□□□□□ -0.09
SMARCA4-216ENST00000591545 CHRNA5P30532 468 aa14.52□□□□□ -0.09
SMARCA4-216ENST00000591545 SARNPP82979 210 aaKnown RBP14.52□□□□□ -0.09
SMARCA4-216ENST00000591545 BAIAP2L1Q9UHR4 511 aa14.52□□□□□ -0.09
SMARCA4-216ENST00000591545 SOS2Q07890 1332 aaPredicted RBP14.52□□□□□ -0.09
SMARCA4-216ENST00000591545 DLATP10515 647 aaKnown RBP14.51□□□□□ -0.09
SMARCA4-216ENST00000591545 ERCC3P19447 782 aa14.51□□□□□ -0.09
SMARCA4-216ENST00000591545 MAP2K2P36507 400 aa14.51□□□□□ -0.09
SMARCA4-216ENST00000591545 U2AF1L4Q8WU68 220 aaKnown RBP14.51□□□□□ -0.09
SMARCA4-216ENST00000591545 CUEDC2Q9H467 287 aa14.51□□□□□ -0.09
SMARCA4-216ENST00000591545 KRIT1O00522 736 aa14.51□□□□□ -0.09
SMARCA4-216ENST00000591545 HOXA7P31268 230 aaPredicted RBP14.51□□□□□ -0.09
SMARCA4-216ENST00000591545 PSMB7Q99436 277 aa14.51□□□□□ -0.09
SMARCA4-216ENST00000591545 VCX3AQ9NNX9 186 aa14.51□□□□□ -0.09
SMARCA4-216ENST00000591545 NLRC4Q9NPP4 1024 aa14.51□□□□□ -0.09
SMARCA4-216ENST00000591545 A0A0G2JLW4 131 aa14.51□□□□□ -0.09
SMARCA4-216ENST00000591545 PNMA6FA0A0J9YX94 578 aa14.51□□□□□ -0.09
SMARCA4-216ENST00000591545 HIP1RO75146 1068 aa14.51□□□□□ -0.09
SMARCA4-216ENST00000591545 SETSIPP0DME0 302 aa14.51□□□□□ -0.09
SMARCA4-216ENST00000591545 GAP43P17677 238 aa14.51□□□□□ -0.09
SMARCA4-216ENST00000591545 GPSM2P81274 684 aa14.51□□□□□ -0.09
SMARCA4-216ENST00000591545 SH3RF3Q8TEJ3 882 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms