RNA–Protein interactions for RNA: ENST00000590941.5

RUNDC3A-206, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-206ENST00000590941 CCP110O43303 1012 aa29.16■■■□□ 2.26
RUNDC3A-206ENST00000590941 ICAM1P05362 532 aa29.16■■■□□ 2.26
RUNDC3A-206ENST00000590941 ZNF76P36508 570 aa29.16■■■□□ 2.26
RUNDC3A-206ENST00000590941 PRR16Q569H4 304 aa29.16■■■□□ 2.26
RUNDC3A-206ENST00000590941 CCDC174Q6PII3 467 aa29.16■■■□□ 2.26
RUNDC3A-206ENST00000590941 GPC2Q8N158 579 aa29.16■■■□□ 2.26
RUNDC3A-206ENST00000590941 ADD3Q9UEY8 706 aaKnown RBP29.16■■■□□ 2.26
RUNDC3A-206ENST00000590941 ZNF541Q9H0D2 1346 aa29.16■■■□□ 2.26
RUNDC3A-206ENST00000590941 LMNB1P20700 586 aa29.15■■■□□ 2.26
RUNDC3A-206ENST00000590941 EEF1GP26641 437 aaKnown RBP29.15■■■□□ 2.26
RUNDC3A-206ENST00000590941 TBX2Q13207 712 aaPredicted RBP29.15■■■□□ 2.26
RUNDC3A-206ENST00000590941 ARID5BQ14865 1188 aa29.15■■■□□ 2.26
RUNDC3A-206ENST00000590941 APTXQ7Z2E3 356 aaKnown RBP29.15■■■□□ 2.26
RUNDC3A-206ENST00000590941 MAP3K20Q9NYL2 800 aaKnown RBP29.15■■■□□ 2.26
RUNDC3A-206ENST00000590941 CFBP00751 764 aa29.15■■■□□ 2.26
RUNDC3A-206ENST00000590941 CCNE1P24864 410 aa29.15■■■□□ 2.26
RUNDC3A-206ENST00000590941 PRELPP51888 382 aa29.15■■■□□ 2.26
RUNDC3A-206ENST00000590941 MCM6Q14566 821 aa29.15■■■□□ 2.26
RUNDC3A-206ENST00000590941 LDHDQ86WU2 507 aa29.15■■■□□ 2.26
RUNDC3A-206ENST00000590941 FAM114A1Q8IWE2 563 aa29.15■■■□□ 2.26
RUNDC3A-206ENST00000590941 NLGN2Q8NFZ4 835 aa29.15■■■□□ 2.26
RUNDC3A-206ENST00000590941 WDR18Q9BV38 432 aa29.15■■■□□ 2.26
RUNDC3A-206ENST00000590941 ZNF112Q9UJU3 913 aa29.15■■■□□ 2.26
RUNDC3A-206ENST00000590941 ITIH6Q6UXX5 1313 aa29.15■■■□□ 2.26
RUNDC3A-206ENST00000590941 HSP90AA4PQ58FG1 418 aa29.14■■■□□ 2.26
RUNDC3A-206ENST00000590941 FOXR2Q6PJQ5 311 aa29.14■■■□□ 2.26
RUNDC3A-206ENST00000590941 MCF2L2Q86YR7 1114 aa29.14■■■□□ 2.26
RUNDC3A-206ENST00000590941 LENG9Q96B70 501 aa29.14■■■□□ 2.26
RUNDC3A-206ENST00000590941 PRIMPOLQ96LW4 560 aa29.14■■■□□ 2.26
RUNDC3A-206ENST00000590941 P2RX7Q99572 595 aaKnown RBP29.14■■■□□ 2.26
RUNDC3A-206ENST00000590941 GLIS2Q9BZE0 524 aaPredicted RBP29.14■■■□□ 2.26
RUNDC3A-206ENST00000590941 PSDA5PKW4 1024 aaPredicted RBP29.13■■■□□ 2.25
RUNDC3A-206ENST00000590941 TCP11X2Q5H9J9 407 aa29.13■■■□□ 2.25
RUNDC3A-206ENST00000590941 SCYL3Q8IZE3 742 aa29.13■■■□□ 2.25
RUNDC3A-206ENST00000590941 C17orf53Q8N3J3 647 aaPredicted RBP29.13■■■□□ 2.25
RUNDC3A-206ENST00000590941 GPRC5DQ9NZD1 345 aa29.13■■■□□ 2.25
RUNDC3A-206ENST00000590941 MAGEC2Q9UBF1 373 aaPredicted RBP29.13■■■□□ 2.25
RUNDC3A-206ENST00000590941 MYMKA6NI61 221 aa29.12■■■□□ 2.25
RUNDC3A-206ENST00000590941 HOXA13P31271 388 aaPredicted RBP29.12■■■□□ 2.25
RUNDC3A-206ENST00000590941 SETQ01105 290 aaPredicted RBP29.12■■■□□ 2.25
RUNDC3A-206ENST00000590941 GHRHRQ02643 423 aa29.12■■■□□ 2.25
RUNDC3A-206ENST00000590941 FCHSD1Q86WN1 690 aa29.12■■■□□ 2.25
RUNDC3A-206ENST00000590941 P2RX5Q93086 422 aa29.12■■■□□ 2.25
RUNDC3A-206ENST00000590941 TRIM47Q96LD4 638 aa29.12■■■□□ 2.25
RUNDC3A-206ENST00000590941 SPON1Q9HCB6 807 aa29.12■■■□□ 2.25
RUNDC3A-206ENST00000590941 KCNJ18B7U540 433 aa29.12■■■□□ 2.25
RUNDC3A-206ENST00000590941 KCNJ12Q14500 433 aa29.12■■■□□ 2.25
RUNDC3A-206ENST00000590941 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.12■■■□□ 2.25
RUNDC3A-206ENST00000590941 CCPG1Q9ULG6 757 aa29.12■■■□□ 2.25
RUNDC3A-206ENST00000590941 FAM86B1E9PN63 330 aa29.11■■■□□ 2.25
RUNDC3A-206ENST00000590941 TPM2P07951 284 aa29.11■■■□□ 2.25
RUNDC3A-206ENST00000590941 FAM86B2P0C5J1 330 aa29.11■■■□□ 2.25
RUNDC3A-206ENST00000590941 SPIRE1Q08AE8 756 aa29.11■■■□□ 2.25
RUNDC3A-206ENST00000590941 TRIM14Q14142 442 aa29.11■■■□□ 2.25
RUNDC3A-206ENST00000590941 NUDT12Q9BQG2 462 aa29.11■■■□□ 2.25
RUNDC3A-206ENST00000590941 PICK1Q9NRD5 415 aa29.11■■■□□ 2.25
RUNDC3A-206ENST00000590941 KIF2AO00139 706 aaPredicted RBP29.1■■■□□ 2.25
RUNDC3A-206ENST00000590941 FGFR1OPO95684 399 aaKnown RBP29.1■■■□□ 2.25
RUNDC3A-206ENST00000590941 TPM1P09493 284 aa29.1■■■□□ 2.25
RUNDC3A-206ENST00000590941 RPA1P27694 616 aa29.1■■■□□ 2.25
RUNDC3A-206ENST00000590941 HSD17B4P51659 736 aa29.1■■■□□ 2.25
RUNDC3A-206ENST00000590941 KRT31Q15323 416 aa29.1■■■□□ 2.25
RUNDC3A-206ENST00000590941 NBPF12Q5TAG4 269 aaPredicted RBP29.1■■■□□ 2.25
RUNDC3A-206ENST00000590941 TTI2Q6NXR4 508 aa29.1■■■□□ 2.25
RUNDC3A-206ENST00000590941 GUF1Q8N442 669 aaKnown RBP29.1■■■□□ 2.25
RUNDC3A-206ENST00000590941 DDX12PQ92771 950 aa29.1■■■□□ 2.25
RUNDC3A-206ENST00000590941 TMX1Q9H3N1 280 aa29.1■■■□□ 2.25
RUNDC3A-206ENST00000590941 FBXO28Q9NVF7 368 aa29.1■■■□□ 2.25
RUNDC3A-206ENST00000590941 R3HCC1Q9Y3T6 440 aaKnown RBP29.1■■■□□ 2.25
RUNDC3A-206ENST00000590941 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP29.1■■■□□ 2.25
RUNDC3A-206ENST00000590941 INPP5BP32019 993 aa29.09■■■□□ 2.25
RUNDC3A-206ENST00000590941 PBX1P40424 430 aa29.09■■■□□ 2.25
RUNDC3A-206ENST00000590941 COPB1P53618 953 aaKnown RBP29.09■■■□□ 2.25
RUNDC3A-206ENST00000590941 KRT26Q7Z3Y9 468 aa29.09■■■□□ 2.25
RUNDC3A-206ENST00000590941 MAPK8IP1Q9UQF2 711 aa29.09■■■□□ 2.25
RUNDC3A-206ENST00000590941 PITPNM2Q9BZ72 1349 aa29.09■■■□□ 2.25
RUNDC3A-206ENST00000590941 MSH4O15457 936 aa29.09■■■□□ 2.25
RUNDC3A-206ENST00000590941 TUBB4AP04350 444 aa29.09■■■□□ 2.25
RUNDC3A-206ENST00000590941 ANGEL2Q5VTE6 544 aaKnown RBP29.09■■■□□ 2.25
RUNDC3A-206ENST00000590941 PPFIBP1Q86W92 1011 aa29.09■■■□□ 2.25
RUNDC3A-206ENST00000590941 CCDC65Q8IXS2 484 aa29.09■■■□□ 2.25
RUNDC3A-206ENST00000590941 KIAA1024Q9UPX6 916 aa29.09■■■□□ 2.25
RUNDC3A-206ENST00000590941 CTDP1Q9Y5B0 961 aaPredicted RBP29.09■■■□□ 2.25
RUNDC3A-206ENST00000590941 IGLV3-22A0A075B6J6 115 aa29.08■■■□□ 2.25
RUNDC3A-206ENST00000590941 N4BP3O15049 544 aa29.08■■■□□ 2.25
RUNDC3A-206ENST00000590941 KIF20AO95235 890 aa29.08■■■□□ 2.25
RUNDC3A-206ENST00000590941 MUTP22033 750 aa29.08■■■□□ 2.25
RUNDC3A-206ENST00000590941 STK4Q13043 487 aa29.08■■■□□ 2.25
RUNDC3A-206ENST00000590941 ARHGAP27Q6ZUM4 889 aa29.08■■■□□ 2.25
RUNDC3A-206ENST00000590941 POLR3CQ9BUI4 534 aaPredicted RBP29.08■■■□□ 2.25
RUNDC3A-206ENST00000590941 SLC38A10Q9HBR0 1119 aa29.08■■■□□ 2.25
RUNDC3A-206ENST00000590941 PPP1R9AQ9ULJ8 1098 aa29.08■■■□□ 2.25
RUNDC3A-206ENST00000590941 RBBP6Q7Z6E9 1792 aaKnown RBP29.07■■■□□ 2.24
RUNDC3A-206ENST00000590941 ASTN2O75129 1339 aaPredicted RBP29.07■■■□□ 2.24
RUNDC3A-206ENST00000590941 ARHGAP6O43182 974 aa29.07■■■□□ 2.24
RUNDC3A-206ENST00000590941 PLA2G4BP0C869 781 aa29.07■■■□□ 2.24
RUNDC3A-206ENST00000590941 EHHADHQ08426 723 aa29.07■■■□□ 2.24
RUNDC3A-206ENST00000590941 CCDC84Q86UT8 332 aaPredicted RBP29.07■■■□□ 2.24
RUNDC3A-206ENST00000590941 CCAR2Q8N163 923 aaKnown RBP29.07■■■□□ 2.24
RUNDC3A-206ENST00000590941 CSGALNACT2Q8N6G5 542 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms