RNA–Protein interactions for RNA: ENST00000590638.5

NEDD4L-230, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-230ENST00000590638 PRDM5Q9NQX1 630 aaPredicted RBP9.76□□□□□ -0.85
NEDD4L-230ENST00000590638 PCDH11XQ9BZA7 1347 aa9.76□□□□□ -0.85
NEDD4L-230ENST00000590638 PCDH11YQ9BZA8 1340 aa9.76□□□□□ -0.85
NEDD4L-230ENST00000590638 NRAPQ86VF7 1730 aa9.76□□□□□ -0.85
NEDD4L-230ENST00000590638 SIPA1L3O60292 1781 aaPredicted RBP9.75□□□□□ -0.85
NEDD4L-230ENST00000590638 KDM3BQ7LBC6 1761 aa9.75□□□□□ -0.85
NEDD4L-230ENST00000590638 ANKRD34BA5PLL1 514 aa9.75□□□□□ -0.85
NEDD4L-230ENST00000590638 ELL2O00472 640 aaPredicted RBP9.75□□□□□ -0.85
NEDD4L-230ENST00000590638 SSRP1Q08945 709 aaKnown RBP9.75□□□□□ -0.85
NEDD4L-230ENST00000590638 NBPF12Q5TAG4 269 aaPredicted RBP9.75□□□□□ -0.85
NEDD4L-230ENST00000590638 ZKSCAN2Q63HK3 967 aa9.75□□□□□ -0.85
NEDD4L-230ENST00000590638 MRM1Q6IN84 353 aaKnown RBP9.75□□□□□ -0.85
NEDD4L-230ENST00000590638 JAZF1Q86VZ6 243 aa9.75□□□□□ -0.85
NEDD4L-230ENST00000590638 RNF141Q8WVD5 230 aa9.75□□□□□ -0.85
NEDD4L-230ENST00000590638 EPN3Q9H201 632 aa9.75□□□□□ -0.85
NEDD4L-230ENST00000590638 C7orf69Q9H7B7 122 aa9.75□□□□□ -0.85
NEDD4L-230ENST00000590638 MIS18AQ9NYP9 233 aa9.75□□□□□ -0.85
NEDD4L-230ENST00000590638 LRP2BPQ9P2M1 347 aa9.75□□□□□ -0.85
NEDD4L-230ENST00000590638 FBXL21Q9UKT6 434 aa9.75□□□□□ -0.85
NEDD4L-230ENST00000590638 THRAP3Q9Y2W1 955 aaKnown RBP9.75□□□□□ -0.85
NEDD4L-230ENST00000590638 CACNA1FO60840 1977 aa9.75□□□□□ -0.85
NEDD4L-230ENST00000590638 SLIT2O94813 1529 aa9.74□□□□□ -0.85
NEDD4L-230ENST00000590638 HMX2A2RU54 273 aa9.74□□□□□ -0.85
NEDD4L-230ENST00000590638 IQCA1LA6NCM1 817 aa9.74□□□□□ -0.85
NEDD4L-230ENST00000590638 BTBD11A6QL63 1104 aa9.74□□□□□ -0.85
NEDD4L-230ENST00000590638 C9IYK1 514 aa9.74□□□□□ -0.85
NEDD4L-230ENST00000590638 CYP27B1O15528 508 aa9.74□□□□□ -0.85
NEDD4L-230ENST00000590638 LEFTY1O75610 366 aa9.74□□□□□ -0.85
NEDD4L-230ENST00000590638 ZNF143P52747 638 aaPredicted RBP9.74□□□□□ -0.85
NEDD4L-230ENST00000590638 RASSF7Q02833 373 aa9.74□□□□□ -0.85
NEDD4L-230ENST00000590638 CYP27C1Q4G0S4 372 aa9.74□□□□□ -0.85
NEDD4L-230ENST00000590638 AXDND1Q5T1B0 1012 aaPredicted RBP9.74□□□□□ -0.85
NEDD4L-230ENST00000590638 C20orf194Q5TEA3 1177 aa9.74□□□□□ -0.85
NEDD4L-230ENST00000590638 FBXL6Q8N531 539 aa9.74□□□□□ -0.85
NEDD4L-230ENST00000590638 EXOC6Q8TAG9 804 aa9.74□□□□□ -0.85
NEDD4L-230ENST00000590638 ARHGAP45Q92619 1136 aa9.74□□□□□ -0.85
NEDD4L-230ENST00000590638 HAUS7Q99871 368 aa9.74□□□□□ -0.85
NEDD4L-230ENST00000590638 GTF2IRD1Q9UHL9 959 aa9.74□□□□□ -0.85
NEDD4L-230ENST00000590638 SUGT1Q9Y2Z0 365 aa9.74□□□□□ -0.85
NEDD4L-230ENST00000590638 KDM2BQ8NHM5 1336 aa9.74□□□□□ -0.85
NEDD4L-230ENST00000590638 WNK3Q9BYP7 1800 aa9.73□□□□□ -0.85
NEDD4L-230ENST00000590638 SFRP5Q5T4F7 317 aa9.73□□□□□ -0.85
NEDD4L-230ENST00000590638 DCAF15Q66K64 600 aa9.73□□□□□ -0.85
NEDD4L-230ENST00000590638 ATF7IPQ6VMQ6 1270 aa9.73□□□□□ -0.85
NEDD4L-230ENST00000590638 ARHGAP27Q6ZUM4 889 aa9.73□□□□□ -0.85
NEDD4L-230ENST00000590638 ZNF669Q96BR6 464 aaPredicted RBP9.73□□□□□ -0.85
NEDD4L-230ENST00000590638 COX4I2Q96KJ9 171 aa9.73□□□□□ -0.85
NEDD4L-230ENST00000590638 SLC52A2Q9HAB3 445 aa9.73□□□□□ -0.85
NEDD4L-230ENST00000590638 KCNH3Q9ULD8 1083 aa9.73□□□□□ -0.85
NEDD4L-230ENST00000590638 NOB1Q9ULX3 412 aaKnown RBP9.73□□□□□ -0.85
NEDD4L-230ENST00000590638 PCDHB12Q9Y5F1 795 aa9.73□□□□□ -0.85
NEDD4L-230ENST00000590638 SHANK3Q9BYB0 1731 aa9.73□□□□□ -0.85
NEDD4L-230ENST00000590638 KDM6AO15550 1401 aaPredicted RBP9.73□□□□□ -0.85
NEDD4L-230ENST00000590638 LRP6O75581 1613 aa9.72□□□□□ -0.85
NEDD4L-230ENST00000590638 CBX7O95931 251 aa9.72□□□□□ -0.85
NEDD4L-230ENST00000590638 EPHX1P07099 455 aa9.72□□□□□ -0.85
NEDD4L-230ENST00000590638 HOXB7P09629 217 aa9.72□□□□□ -0.85
NEDD4L-230ENST00000590638 EIF4A1P60842 406 aaKnown RBP9.72□□□□□ -0.85
NEDD4L-230ENST00000590638 CYP27A1Q02318 531 aa9.72□□□□□ -0.85
NEDD4L-230ENST00000590638 AUHQ13825 339 aaKnown RBP9.72□□□□□ -0.85
NEDD4L-230ENST00000590638 KRT24Q2M2I5 525 aa9.72□□□□□ -0.85
NEDD4L-230ENST00000590638 NOL9Q5SY16 702 aaKnown RBP9.72□□□□□ -0.85
NEDD4L-230ENST00000590638 MEX3CQ5U5Q3 659 aaKnown RBP9.72□□□□□ -0.85
NEDD4L-230ENST00000590638 CCDC30Q5VVM6 783 aa9.72□□□□□ -0.85
NEDD4L-230ENST00000590638 OGFOD3Q6PK18 319 aa9.72□□□□□ -0.85
NEDD4L-230ENST00000590638 ZAR1Q86SH2 424 aa9.72□□□□□ -0.85
NEDD4L-230ENST00000590638 FTSJ3Q8IY81 847 aaKnown RBP9.72□□□□□ -0.85
NEDD4L-230ENST00000590638 LRRC47Q8N1G4 583 aaKnown RBP9.72□□□□□ -0.85
NEDD4L-230ENST00000590638 SH3TC2Q8TF17 1288 aa9.72□□□□□ -0.85
NEDD4L-230ENST00000590638 CCDC136Q96JN2 1154 aa9.72□□□□□ -0.85
NEDD4L-230ENST00000590638 ASCC2Q9H1I8 757 aaPredicted RBP9.72□□□□□ -0.85
NEDD4L-230ENST00000590638 SPATA31A1Q5TZJ5 1347 aa9.72□□□□□ -0.85
NEDD4L-230ENST00000590638 DISP2A7MBM2 1401 aa9.72□□□□□ -0.85
NEDD4L-230ENST00000590638 MRC1P22897 1456 aa9.72□□□□□ -0.85
NEDD4L-230ENST00000590638 ERVV-2B6SEH9 535 aa9.71□□□□□ -0.86
NEDD4L-230ENST00000590638 EXOC5O00471 708 aa9.71□□□□□ -0.86
NEDD4L-230ENST00000590638 PPM1BO75688 479 aa9.71□□□□□ -0.86
NEDD4L-230ENST00000590638 EOMESO95936 686 aa9.71□□□□□ -0.86
NEDD4L-230ENST00000590638 ITGA4P13612 1032 aa9.71□□□□□ -0.86
NEDD4L-230ENST00000590638 KCNMA1Q12791 1236 aa9.71□□□□□ -0.86
NEDD4L-230ENST00000590638 SLC10A6Q3KNW5 377 aa9.71□□□□□ -0.86
NEDD4L-230ENST00000590638 PRR23CQ6ZRP0 262 aa9.71□□□□□ -0.86
NEDD4L-230ENST00000590638 SPATC1Q76KD6 591 aa9.71□□□□□ -0.86
NEDD4L-230ENST00000590638 UNC5CLQ8IV45 518 aa9.71□□□□□ -0.86
NEDD4L-230ENST00000590638 C7orf61Q8IZ16 206 aa9.71□□□□□ -0.86
NEDD4L-230ENST00000590638 FGD4Q96M96 766 aa9.71□□□□□ -0.86
NEDD4L-230ENST00000590638 MFSD14AQ96MC6 490 aa9.71□□□□□ -0.86
NEDD4L-230ENST00000590638 FBXL18Q96ME1 805 aa9.71□□□□□ -0.86
NEDD4L-230ENST00000590638 STK31Q9BXU1 1019 aa9.71□□□□□ -0.86
NEDD4L-230ENST00000590638 ZMYM5Q9UJ78 669 aa9.71□□□□□ -0.86
NEDD4L-230ENST00000590638 SPATA31A5Q5VU36 1347 aa9.71□□□□□ -0.86
NEDD4L-230ENST00000590638 SPATA31A7Q8IWB4 1347 aa9.71□□□□□ -0.86
NEDD4L-230ENST00000590638 GDF11O95390 407 aa9.7□□□□□ -0.86
NEDD4L-230ENST00000590638 TRIM27P14373 513 aa9.7□□□□□ -0.86
NEDD4L-230ENST00000590638 LILRB2Q8N423 598 aa9.7□□□□□ -0.86
NEDD4L-230ENST00000590638 PANK1Q8TE04 598 aa9.7□□□□□ -0.86
NEDD4L-230ENST00000590638 RNPC3Q96LT9 517 aaKnown RBP9.7□□□□□ -0.86
NEDD4L-230ENST00000590638 API5Q9BZZ5 524 aaKnown RBP9.7□□□□□ -0.86
NEDD4L-230ENST00000590638 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.7□□□□□ -0.86
NEDD4L-230ENST00000590638 NOP56O00567 594 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms