RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, human

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-222	ENST00000590619	IL17RA	Q96F46	866 aa		7.75	□□□□□ -1.17
DNMT1-222	ENST00000590619	TLR7	Q9NYK1	1049 aa	Known RBP	7.75	□□□□□ -1.17
DNMT1-222	ENST00000590619	HDAC6	Q9UBN7	1215 aa		7.75	□□□□□ -1.17
DNMT1-222	ENST00000590619	GTF2IRD1	Q9UHL9	959 aa		7.75	□□□□□ -1.17
DNMT1-222	ENST00000590619	NOB1	Q9ULX3	412 aa	Known RBP	7.75	□□□□□ -1.17
DNMT1-222	ENST00000590619	BARX2	Q9UMQ3	279 aa	Predicted RBP	7.75	□□□□□ -1.17
DNMT1-222	ENST00000590619	PLAGL2	Q9UPG8	496 aa		7.75	□□□□□ -1.17
DNMT1-222	ENST00000590619	SCN10A	Q9Y5Y9	1956 aa		7.75	□□□□□ -1.17
DNMT1-222	ENST00000590619	MYO5A	Q9Y4I1	1855 aa	Known RBP	7.75	□□□□□ -1.17
DNMT1-222	ENST00000590619	CHD6	Q8TD26	2715 aa		7.74	□□□□□ -1.17
DNMT1-222	ENST00000590619	TCRBV5S4A2T	A0A5A2	114 aa		7.74	□□□□□ -1.17
DNMT1-222	ENST00000590619	NKRF	O15226	690 aa	Known RBP eCLIP	7.74	□□□□□ -1.17
DNMT1-222	ENST00000590619	BRD1	O95696	1058 aa		7.74	□□□□□ -1.17
DNMT1-222	ENST00000590619	GLP2R	O95838	553 aa		7.74	□□□□□ -1.17
DNMT1-222	ENST00000590619	FDX1	P10109	184 aa		7.74	□□□□□ -1.17
DNMT1-222	ENST00000590619	ALAS1	P13196	640 aa		7.74	□□□□□ -1.17
DNMT1-222	ENST00000590619	HOXB3	P14651	431 aa	Predicted RBP	7.74	□□□□□ -1.17
DNMT1-222	ENST00000590619	PDE6A	P16499	860 aa		7.74	□□□□□ -1.17
DNMT1-222	ENST00000590619	SNAP25	P60880	206 aa		7.74	□□□□□ -1.17
DNMT1-222	ENST00000590619	PTK7	Q13308	1070 aa		7.74	□□□□□ -1.17
DNMT1-222	ENST00000590619	BAAT	Q14032	418 aa	Predicted RBP	7.74	□□□□□ -1.17
DNMT1-222	ENST00000590619	HIC1	Q14526	733 aa		7.74	□□□□□ -1.17
DNMT1-222	ENST00000590619	RSPO4	Q2I0M5	234 aa	Predicted RBP	7.74	□□□□□ -1.17
DNMT1-222	ENST00000590619	ZBTB33	Q86T24	672 aa		7.74	□□□□□ -1.17
DNMT1-222	ENST00000590619	RBM23	Q86U06	439 aa	Known RBP	7.74	□□□□□ -1.17
DNMT1-222	ENST00000590619	DCLK2	Q8N568	766 aa		7.74	□□□□□ -1.17
DNMT1-222	ENST00000590619	KREMEN2	Q8NCW0	462 aa		7.74	□□□□□ -1.17
DNMT1-222	ENST00000590619	EAF2	Q96CJ1	260 aa	Predicted RBP	7.74	□□□□□ -1.17
DNMT1-222	ENST00000590619	C11orf84	Q9BUA3	381 aa	Predicted RBP	7.74	□□□□□ -1.17
DNMT1-222	ENST00000590619	ARMT1	Q9H993	441 aa		7.74	□□□□□ -1.17
DNMT1-222	ENST00000590619	ZNF292	O60281	2723 aa		7.74	□□□□□ -1.17
DNMT1-222	ENST00000590619	ZNF532	Q9HCE3	1301 aa		7.74	□□□□□ -1.17
DNMT1-222	ENST00000590619	SPTBN2	O15020	2390 aa		7.74	□□□□□ -1.17
DNMT1-222	ENST00000590619	RSPH10B2	B2RC85	870 aa		7.73	□□□□□ -1.17
DNMT1-222	ENST00000590619	TMEM232	C9JQI7	657 aa		7.73	□□□□□ -1.17
DNMT1-222	ENST00000590619	ARIH2	O95376	493 aa		7.73	□□□□□ -1.17
DNMT1-222	ENST00000590619	MMP1	P03956	469 aa		7.73	□□□□□ -1.17
DNMT1-222	ENST00000590619	GNAI3	P08754	354 aa		7.73	□□□□□ -1.17
DNMT1-222	ENST00000590619	RSPH10B	P0C881	870 aa		7.73	□□□□□ -1.17
DNMT1-222	ENST00000590619	TXN	P10599	105 aa	Known RBP	7.73	□□□□□ -1.17
DNMT1-222	ENST00000590619	NRIP1	P48552	1158 aa		7.73	□□□□□ -1.17
DNMT1-222	ENST00000590619	ALDH5A1	P51649	535 aa	Predicted RBP	7.73	□□□□□ -1.17
DNMT1-222	ENST00000590619	ATXN1	P54253	815 aa	Known RBP	7.73	□□□□□ -1.17
DNMT1-222	ENST00000590619	ANGPT1	Q15389	498 aa		7.73	□□□□□ -1.17
DNMT1-222	ENST00000590619	ALDH1L2	Q3SY69	923 aa		7.73	□□□□□ -1.17
DNMT1-222	ENST00000590619	SLFNL1	Q499Z3	407 aa		7.73	□□□□□ -1.17
DNMT1-222	ENST00000590619	CTR9	Q6PD62	1173 aa		7.73	□□□□□ -1.17
DNMT1-222	ENST00000590619	NSMF	Q6X4W1	530 aa		7.73	□□□□□ -1.17
DNMT1-222	ENST00000590619	RPAP2	Q8IXW5	612 aa	Predicted RBP	7.73	□□□□□ -1.17
DNMT1-222	ENST00000590619	UBALD2	Q8IYN6	164 aa		7.73	□□□□□ -1.17
DNMT1-222	ENST00000590619	SPPL3	Q8TCT6	385 aa		7.73	□□□□□ -1.17
DNMT1-222	ENST00000590619	AFG1L	Q8WV93	481 aa		7.73	□□□□□ -1.17
DNMT1-222	ENST00000590619	CLP1	Q92989	425 aa	Known RBP	7.73	□□□□□ -1.17
DNMT1-222	ENST00000590619	S1PR5	Q9H228	398 aa		7.73	□□□□□ -1.17
DNMT1-222	ENST00000590619	SEMA4A	Q9H3S1	761 aa		7.73	□□□□□ -1.17
DNMT1-222	ENST00000590619	SMOC2	Q9H3U7	446 aa		7.73	□□□□□ -1.17
DNMT1-222	ENST00000590619	ATP8A2	Q9NTI2	1148 aa		7.73	□□□□□ -1.17
DNMT1-222	ENST00000590619	WDR87	Q6ZQQ6	2873 aa		7.73	□□□□□ -1.17
DNMT1-222	ENST00000590619	IGKV6D-41	A0A0C4DH26	115 aa		7.72	□□□□□ -1.17
DNMT1-222	ENST00000590619	PER2	O15055	1255 aa		7.72	□□□□□ -1.17
DNMT1-222	ENST00000590619	BMP3	P12645	472 aa		7.72	□□□□□ -1.17
DNMT1-222	ENST00000590619	NPR3	P17342	541 aa		7.72	□□□□□ -1.17
DNMT1-222	ENST00000590619	RASA1	P20936	1047 aa		7.72	□□□□□ -1.17
DNMT1-222	ENST00000590619	RBM10	P98175	930 aa	Known RBP	7.72	□□□□□ -1.17
DNMT1-222	ENST00000590619	ACAP1	Q15027	740 aa		7.72	□□□□□ -1.17
DNMT1-222	ENST00000590619	PPP2R5B	Q15173	497 aa		7.72	□□□□□ -1.17
DNMT1-222	ENST00000590619	SLFN13	Q68D06	897 aa		7.72	□□□□□ -1.17
DNMT1-222	ENST00000590619	C7orf31	Q8N865	590 aa		7.72	□□□□□ -1.17
DNMT1-222	ENST00000590619	ATP8B4	Q8TF62	1192 aa		7.72	□□□□□ -1.17
DNMT1-222	ENST00000590619	STAG1	Q8WVM7	1258 aa		7.72	□□□□□ -1.17
DNMT1-222	ENST00000590619	ALG1	Q9BT22	464 aa		7.72	□□□□□ -1.17
DNMT1-222	ENST00000590619	IFIH1	Q9BYX4	1025 aa	Known RBP	7.72	□□□□□ -1.17
DNMT1-222	ENST00000590619	ADD3	Q9UEY8	706 aa	Known RBP	7.72	□□□□□ -1.17
DNMT1-222	ENST00000590619	CEP250	Q9BV73	2442 aa		7.72	□□□□□ -1.17
DNMT1-222	ENST00000590619	MYO10	Q9HD67	2058 aa		7.72	□□□□□ -1.17
DNMT1-222	ENST00000590619	EMSY	Q7Z589	1322 aa		7.72	□□□□□ -1.17
DNMT1-222	ENST00000590619	RAD50	Q92878	1312 aa		7.72	□□□□□ -1.17
DNMT1-222	ENST00000590619	MAP1B	P46821	2468 aa	Known RBP	7.72	□□□□□ -1.17
DNMT1-222	ENST00000590619	LOC102724159	A0A0B4J2E5	919 aa		7.71	□□□□□ -1.18
DNMT1-222	ENST00000590619	HAS3	O00219	553 aa		7.71	□□□□□ -1.18
DNMT1-222	ENST00000590619	SURF6	O75683	361 aa	Known RBP	7.71	□□□□□ -1.18
DNMT1-222	ENST00000590619	GNAI2	P04899	355 aa		7.71	□□□□□ -1.18
DNMT1-222	ENST00000590619	ITGB1	P05556	798 aa		7.71	□□□□□ -1.18
DNMT1-222	ENST00000590619	MMP3	P08254	477 aa		7.71	□□□□□ -1.18
DNMT1-222	ENST00000590619	CAST	P20810	708 aa	Known RBP	7.71	□□□□□ -1.18
DNMT1-222	ENST00000590619	SP100	P23497	879 aa	Predicted RBP	7.71	□□□□□ -1.18
DNMT1-222	ENST00000590619	THPO	P40225	353 aa		7.71	□□□□□ -1.18
DNMT1-222	ENST00000590619	PSEN2	P49810	448 aa		7.71	□□□□□ -1.18
DNMT1-222	ENST00000590619	PDE4B	Q07343	736 aa		7.71	□□□□□ -1.18
DNMT1-222	ENST00000590619	POLA2	Q14181	598 aa		7.71	□□□□□ -1.18
DNMT1-222	ENST00000590619	PWP2	Q15269	919 aa	Known RBP	7.71	□□□□□ -1.18
DNMT1-222	ENST00000590619	CCDC62	Q6P9F0	684 aa		7.71	□□□□□ -1.18
DNMT1-222	ENST00000590619	STK11IP	Q8N1F8	1099 aa		7.71	□□□□□ -1.18
DNMT1-222	ENST00000590619	DTWD2	Q8NBA8	298 aa		7.71	□□□□□ -1.18
DNMT1-222	ENST00000590619	GMCL1P1	Q8NEA9	526 aa		7.71	□□□□□ -1.18
DNMT1-222	ENST00000590619	VN1R2	Q8NFZ6	395 aa		7.71	□□□□□ -1.18
DNMT1-222	ENST00000590619	CYP2W1	Q8TAV3	490 aa		7.71	□□□□□ -1.18
DNMT1-222	ENST00000590619	SCFD2	Q8WU76	684 aa		7.71	□□□□□ -1.18
DNMT1-222	ENST00000590619	CHURC1	Q8WUH1	139 aa		7.71	□□□□□ -1.18
DNMT1-222	ENST00000590619	SEPT8	Q92599	483 aa		7.71	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms