RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 MRVI1Q9Y6F6 885 aa23.8■■□□□ 1.4
CIRBP-226ENST00000590171 KPNA6O60684 536 aa23.79■■□□□ 1.4
CIRBP-226ENST00000590171 MMP3P08254 477 aa23.79■■□□□ 1.4
CIRBP-226ENST00000590171 DHX32Q7L7V1 743 aaKnown RBP23.79■■□□□ 1.4
CIRBP-226ENST00000590171 VSIG10LQ86VR7 867 aa23.79■■□□□ 1.4
CIRBP-226ENST00000590171 MICU3Q86XE3 530 aa23.79■■□□□ 1.4
CIRBP-226ENST00000590171 FANCBQ8NB91 859 aa23.79■■□□□ 1.4
CIRBP-226ENST00000590171 BAZ2BQ9UIF8 2168 aaKnown RBP23.79■■□□□ 1.4
CIRBP-226ENST00000590171 UMODL1Q5DID0 1318 aa23.79■■□□□ 1.4
CIRBP-226ENST00000590171 CSF2RAP15509 400 aa23.78■■□□□ 1.4
CIRBP-226ENST00000590171 CYP2C18P33260 490 aa23.78■■□□□ 1.4
CIRBP-226ENST00000590171 KRT32Q14532 448 aa23.78■■□□□ 1.4
CIRBP-226ENST00000590171 APOA5Q6Q788 366 aa23.78■■□□□ 1.4
CIRBP-226ENST00000590171 TMTC3Q6ZXV5 915 aa23.78■■□□□ 1.4
CIRBP-226ENST00000590171 DEFB123Q8N688 67 aa23.78■■□□□ 1.4
CIRBP-226ENST00000590171 PPP1R13LQ8WUF5 828 aa23.78■■□□□ 1.4
CIRBP-226ENST00000590171 ZFP91Q96JP5 570 aaPredicted RBP23.78■■□□□ 1.4
CIRBP-226ENST00000590171 RNPC3Q96LT9 517 aaKnown RBP23.78■■□□□ 1.4
CIRBP-226ENST00000590171 HIPK3Q9H422 1215 aa23.78■■□□□ 1.4
CIRBP-226ENST00000590171 KIAA1217Q5T5P2 1943 aa23.77■■□□□ 1.4
CIRBP-226ENST00000590171 CCND2P30279 289 aa23.77■■□□□ 1.4
CIRBP-226ENST00000590171 NBPF20Q3BBV1 942 aa23.77■■□□□ 1.4
CIRBP-226ENST00000590171 CCDC82Q8N4S0 544 aa23.77■■□□□ 1.4
CIRBP-226ENST00000590171 TMEM199Q8N511 208 aa23.77■■□□□ 1.4
CIRBP-226ENST00000590171 TRMT13Q9NUP7 481 aaKnown RBP23.77■■□□□ 1.4
CIRBP-226ENST00000590171 BRPF3Q9ULD4 1205 aa23.77■■□□□ 1.4
CIRBP-226ENST00000590171 FRMPD4Q14CM0 1322 aa23.77■■□□□ 1.4
CIRBP-226ENST00000590171 hCG_1642624A0A1W2PR95 340 aa23.76■■□□□ 1.39
CIRBP-226ENST00000590171 PPIGQ13427 754 aaKnown RBP eCLIP23.76■■□□□ 1.393e-9■■■□□ 14.7
CIRBP-226ENST00000590171 SYNE3Q6ZMZ3 975 aa23.76■■□□□ 1.39
CIRBP-226ENST00000590171 C16orf59Q7L2K0 433 aa23.76■■□□□ 1.39
CIRBP-226ENST00000590171 KCNB2Q92953 911 aa23.76■■□□□ 1.39
CIRBP-226ENST00000590171 EMID1Q96A84 441 aaPredicted RBP23.76■■□□□ 1.39
CIRBP-226ENST00000590171 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.76■■□□□ 1.396e-8■■□□□ 11.9
CIRBP-226ENST00000590171 NOC4LQ9BVI4 516 aaKnown RBP23.76■■□□□ 1.39
CIRBP-226ENST00000590171 SCN10AQ9Y5Y9 1956 aa23.75■■□□□ 1.39
CIRBP-226ENST00000590171 MEIS2O14770 477 aa23.75■■□□□ 1.39
CIRBP-226ENST00000590171 HSPA4P34932 840 aa23.75■■□□□ 1.39
CIRBP-226ENST00000590171 FAM47CQ5HY64 1035 aa23.75■■□□□ 1.39
CIRBP-226ENST00000590171 USP17L6PQ6QN14 398 aa23.75■■□□□ 1.39
CIRBP-226ENST00000590171 PIK3CDO00329 1044 aa23.74■■□□□ 1.39
CIRBP-226ENST00000590171 CYP2C9P11712 490 aa23.74■■□□□ 1.39
CIRBP-226ENST00000590171 LAMC2Q13753 1193 aa23.74■■□□□ 1.39
CIRBP-226ENST00000590171 NFRKBQ6P4R8 1299 aa23.74■■□□□ 1.39
CIRBP-226ENST00000590171 KCNV1Q6PIU1 500 aa23.74■■□□□ 1.39
CIRBP-226ENST00000590171 DHX37Q8IY37 1157 aaKnown RBP23.74■■□□□ 1.39
CIRBP-226ENST00000590171 SMARCC2Q8TAQ2 1214 aa23.74■■□□□ 1.39
CIRBP-226ENST00000590171 GPKOWQ92917 476 aaPredicted RBP eCLIP23.74■■□□□ 1.39
CIRBP-226ENST00000590171 WNT8AQ9H1J5 351 aa23.74■■□□□ 1.39
CIRBP-226ENST00000590171 HMGB1P09429 215 aaKnown RBP23.73■■□□□ 1.39
CIRBP-226ENST00000590171 SUPT20HL2P0C7V6 817 aa23.73■■□□□ 1.39
CIRBP-226ENST00000590171 ACRP10323 421 aa23.73■■□□□ 1.39
CIRBP-226ENST00000590171 CPA1P15085 419 aa23.73■■□□□ 1.39
CIRBP-226ENST00000590171 CASTP20810 708 aaKnown RBP23.73■■□□□ 1.39
CIRBP-226ENST00000590171 UBA1P22314 1058 aaKnown RBP23.73■■□□□ 1.39
CIRBP-226ENST00000590171 CCL23P55773 120 aa23.73■■□□□ 1.39
CIRBP-226ENST00000590171 MRPS9P82933 396 aaKnown RBP23.73■■□□□ 1.39
CIRBP-226ENST00000590171 SMAD3P84022 425 aaKnown RBP23.73■■□□□ 1.39
CIRBP-226ENST00000590171 SP2Q02086 613 aa23.73■■□□□ 1.39
CIRBP-226ENST00000590171 TMEM240Q5SV17 173 aa23.73■■□□□ 1.39
CIRBP-226ENST00000590171 PPTC7Q8NI37 304 aa23.73■■□□□ 1.39
CIRBP-226ENST00000590171 KAT2BQ92831 832 aa23.73■■□□□ 1.39
CIRBP-226ENST00000590171 CUL5Q93034 780 aa23.73■■□□□ 1.39
CIRBP-226ENST00000590171 RBM28Q9NW13 759 aaKnown RBP23.73■■□□□ 1.39
CIRBP-226ENST00000590171 MTMR10Q9NXD2 777 aa23.73■■□□□ 1.39
CIRBP-226ENST00000590171 SNX14Q9Y5W7 946 aa23.73■■□□□ 1.39
CIRBP-226ENST00000590171 CNTNAP5Q8WYK1 1306 aa23.73■■□□□ 1.39
CIRBP-226ENST00000590171 KLF18A0A0U1RQI7 1052 aa23.72■■□□□ 1.39
CIRBP-226ENST00000590171 ZBTB43O43298 467 aa23.72■■□□□ 1.39
CIRBP-226ENST00000590171 SORBS3O60504 671 aa23.72■■□□□ 1.39
CIRBP-226ENST00000590171 GGPS1O95749 300 aa23.72■■□□□ 1.39
CIRBP-226ENST00000590171 CHMP4BP1P59074 171 aa23.72■■□□□ 1.39
CIRBP-226ENST00000590171 PTPN11Q06124 597 aaPredicted RBP23.72■■□□□ 1.39
CIRBP-226ENST00000590171 DGKDQ16760 1214 aa23.72■■□□□ 1.39
CIRBP-226ENST00000590171 RTN1Q16799 776 aa23.72■■□□□ 1.39
CIRBP-226ENST00000590171 MYSM1Q5VVJ2 828 aa23.72■■□□□ 1.39
CIRBP-226ENST00000590171 FAM109BQ6ICB4 259 aaPredicted RBP23.72■■□□□ 1.39
CIRBP-226ENST00000590171 INPP4AQ96PE3 977 aaPredicted RBP23.72■■□□□ 1.39
CIRBP-226ENST00000590171 IL23AQ9NPF7 189 aa23.72■■□□□ 1.39
CIRBP-226ENST00000590171 TGFB3P10600 412 aa23.71■■□□□ 1.39
CIRBP-226ENST00000590171 HSDL1Q3SXM5 330 aa23.71■■□□□ 1.39
CIRBP-226ENST00000590171 CELF3Q5SZQ8 465 aaKnown RBP23.71■■□□□ 1.39
CIRBP-226ENST00000590171 PSRC1Q6PGN9 363 aaPredicted RBP23.71■■□□□ 1.39
CIRBP-226ENST00000590171 ZNF365Q70YC5 407 aa23.71■■□□□ 1.39
CIRBP-226ENST00000590171 JAKMIP1Q96N16 626 aaKnown RBP23.71■■□□□ 1.39
CIRBP-226ENST00000590171 PSTPIP2Q9H939 334 aa23.71■■□□□ 1.39
CIRBP-226ENST00000590171 GOLGA8AA7E2F4 631 aa23.7■■□□□ 1.38
CIRBP-226ENST00000590171 GOLGA8BA8MQT2 603 aa23.7■■□□□ 1.38
CIRBP-226ENST00000590171 STAM2O75886 525 aa23.7■■□□□ 1.38
CIRBP-226ENST00000590171 REC8O95072 547 aa23.7■■□□□ 1.38
CIRBP-226ENST00000590171 FUT2Q10981 343 aa23.7■■□□□ 1.38
CIRBP-226ENST00000590171 RASIP1Q5U651 963 aa23.7■■□□□ 1.38
CIRBP-226ENST00000590171 HEATR3Q7Z4Q2 680 aa23.7■■□□□ 1.38
CIRBP-226ENST00000590171 SCLYQ96I15 445 aa23.7■■□□□ 1.38
CIRBP-226ENST00000590171 SPATA33Q96N06 139 aa23.7■■□□□ 1.38
CIRBP-226ENST00000590171 RTEL1Q9NZ71 1219 aa23.7■■□□□ 1.38
CIRBP-226ENST00000590171 F2P00734 622 aa23.69■■□□□ 1.38
CIRBP-226ENST00000590171 ZNF286BP0CG31 522 aa23.69■■□□□ 1.38
CIRBP-226ENST00000590171 HOXD8P13378 290 aaPredicted RBP23.69■■□□□ 1.38
CIRBP-226ENST00000590171 ICAM3P32942 547 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms