RNA–Protein interactions for RNA: ENST00000589872.1

NBR1-205, Transcript of NBR1, autophagy cargo receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NBR1, Length 3,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-205ENST00000589872 ZNF622Q969S3 477 aaKnown RBP eCLIP13.67□□□□□ -0.22
NBR1-205ENST00000589872 DHTKD1Q96HY7 919 aaPredicted RBP13.67□□□□□ -0.22
NBR1-205ENST00000589872 MMRN2Q9H8L6 949 aa13.67□□□□□ -0.22
NBR1-205ENST00000589872 SIK3Q9Y2K2 1263 aa13.67□□□□□ -0.22
NBR1-205ENST00000589872 LEMD3Q9Y2U8 911 aa13.67□□□□□ -0.22
NBR1-205ENST00000589872 GMNCA6NCL1 334 aa13.67□□□□□ -0.22
NBR1-205ENST00000589872 RAD51CO43502 376 aa13.67□□□□□ -0.22
NBR1-205ENST00000589872 GCFC2P16383 781 aaKnown RBP13.67□□□□□ -0.22
NBR1-205ENST00000589872 FGFR2P21802 821 aa13.67□□□□□ -0.22
NBR1-205ENST00000589872 EVX2Q03828 476 aa13.67□□□□□ -0.22
NBR1-205ENST00000589872 PDE4DQ08499 809 aa13.67□□□□□ -0.22
NBR1-205ENST00000589872 PPP2R5AQ15172 486 aa13.67□□□□□ -0.22
NBR1-205ENST00000589872 PPP2R5BQ15173 497 aa13.67□□□□□ -0.22
NBR1-205ENST00000589872 KBTBD4Q9NVX7 518 aa13.67□□□□□ -0.22
NBR1-205ENST00000589872 PNPLA7Q6ZV29 1317 aa13.67□□□□□ -0.22
NBR1-205ENST00000589872 CNOT8Q9UFF9 292 aaKnown RBP13.66□□□□□ -0.22
NBR1-205ENST00000589872 SLC12A6Q9UHW9 1150 aa13.66□□□□□ -0.22
NBR1-205ENST00000589872 PJA2O43164 708 aa13.66□□□□□ -0.22
NBR1-205ENST00000589872 NMT2O60551 498 aa13.66□□□□□ -0.22
NBR1-205ENST00000589872 TRAPPC10P48553 1259 aa13.66□□□□□ -0.22
NBR1-205ENST00000589872 DRP2Q13474 957 aa13.66□□□□□ -0.22
NBR1-205ENST00000589872 PUM3Q15397 648 aaKnown RBP13.66□□□□□ -0.22
NBR1-205ENST00000589872 UAP1Q16222 522 aaPredicted RBP13.66□□□□□ -0.22
NBR1-205ENST00000589872 CDC37Q16543 378 aaPredicted RBP13.66□□□□□ -0.22
NBR1-205ENST00000589872 ARL6IP4Q66PJ3 421 aaKnown RBP13.66□□□□□ -0.22
NBR1-205ENST00000589872 BARGINQ6ZT62 677 aa13.66□□□□□ -0.22
NBR1-205ENST00000589872 TOM1L2Q6ZVM7 507 aa13.66□□□□□ -0.22
NBR1-205ENST00000589872 KLHL7Q8IXQ5 586 aa13.66□□□□□ -0.22
NBR1-205ENST00000589872 DDX17Q92841 729 aaKnown RBP13.66□□□□□ -0.22
NBR1-205ENST00000589872 SGSM3Q96HU1 749 aa13.66□□□□□ -0.22
NBR1-205ENST00000589872 SEC16BQ96JE7 1060 aa13.66□□□□□ -0.22
NBR1-205ENST00000589872 NOX5Q96PH1 765 aa13.66□□□□□ -0.22
NBR1-205ENST00000589872 ACTR5Q9H9F9 607 aaPredicted RBP13.66□□□□□ -0.22
NBR1-205ENST00000589872 UBR2Q8IWV8 1755 aa13.66□□□□□ -0.22
NBR1-205ENST00000589872 PALMO75781 387 aa13.65□□□□□ -0.22
NBR1-205ENST00000589872 SCG2P13521 617 aa13.65□□□□□ -0.22
NBR1-205ENST00000589872 GNAT2P19087 354 aa13.65□□□□□ -0.22
NBR1-205ENST00000589872 HSPA9P38646 679 aaKnown RBP13.65□□□□□ -0.22
NBR1-205ENST00000589872 MRPL12P52815 198 aaKnown RBP13.65□□□□□ -0.22
NBR1-205ENST00000589872 CHADLQ6NUI6 762 aa13.65□□□□□ -0.22
NBR1-205ENST00000589872 DDX42Q86XP3 938 aaKnown RBP eCLIP13.65□□□□□ -0.22
NBR1-205ENST00000589872 CCDC155Q8N6L0 562 aa13.65□□□□□ -0.22
NBR1-205ENST00000589872 SLC24A3Q9HC58 644 aa13.65□□□□□ -0.22
NBR1-205ENST00000589872 TRAPPC3O43617 180 aa13.65□□□□□ -0.22
NBR1-205ENST00000589872 RPSAP08865 295 aaKnown RBP13.65□□□□□ -0.22
NBR1-205ENST00000589872 HSD17B3P37058 310 aa13.65□□□□□ -0.22
NBR1-205ENST00000589872 SCTRP47872 440 aa13.65□□□□□ -0.22
NBR1-205ENST00000589872 ASTE1Q2TB18 679 aaPredicted RBP13.65□□□□□ -0.22
NBR1-205ENST00000589872 NGLY1Q96IV0 654 aa13.65□□□□□ -0.22
NBR1-205ENST00000589872 SEMA6BQ9H3T3 888 aa13.65□□□□□ -0.22
NBR1-205ENST00000589872 RBM28Q9NW13 759 aaKnown RBP13.65□□□□□ -0.22
NBR1-205ENST00000589872 BCCIPQ9P287 314 aaKnown RBP eCLIP13.65□□□□□ -0.22
NBR1-205ENST00000589872 H0YGN5 161 aa13.65□□□□□ -0.23
NBR1-205ENST00000589872 IRS4O14654 1257 aaPredicted RBP13.65□□□□□ -0.23
NBR1-205ENST00000589872 PPP1R12BO60237 982 aaPredicted RBP13.65□□□□□ -0.23
NBR1-205ENST00000589872 NEBLO76041 1014 aa13.65□□□□□ -0.23
NBR1-205ENST00000589872 UBA7P41226 1012 aa13.65□□□□□ -0.23
NBR1-205ENST00000589872 BCAMP50895 628 aa13.65□□□□□ -0.23
NBR1-205ENST00000589872 ERVK-9P63128 1117 aa13.65□□□□□ -0.23
NBR1-205ENST00000589872 TLDC1Q6P9B6 456 aa13.65□□□□□ -0.23
NBR1-205ENST00000589872 DTHD1Q6ZMT9 781 aa13.65□□□□□ -0.23
NBR1-205ENST00000589872 C1orf131Q8NDD1 294 aaKnown RBP13.65□□□□□ -0.23
NBR1-205ENST00000589872 WHAMMQ8TF30 809 aa13.65□□□□□ -0.23
NBR1-205ENST00000589872 BAP1Q92560 729 aa13.65□□□□□ -0.23
NBR1-205ENST00000589872 GPKOWQ92917 476 aaPredicted RBP eCLIP13.65□□□□□ -0.23
NBR1-205ENST00000589872 LRRC4CQ9HCJ2 640 aa13.65□□□□□ -0.23
NBR1-205ENST00000589872 NFS1Q9Y697 457 aa13.65□□□□□ -0.23
NBR1-205ENST00000589872 DCDC2CA8MYV0 355 aa13.64□□□□□ -0.23
NBR1-205ENST00000589872 ECHS1P30084 290 aa13.64□□□□□ -0.23
NBR1-205ENST00000589872 CLNS1AP54105 237 aaKnown RBP13.64□□□□□ -0.23
NBR1-205ENST00000589872 HLTFQ14527 1009 aaKnown RBP eCLIP13.64□□□□□ -0.23
NBR1-205ENST00000589872 ACCSLQ4AC99 568 aa13.64□□□□□ -0.23
NBR1-205ENST00000589872 NLRP10Q86W26 655 aa13.64□□□□□ -0.23
NBR1-205ENST00000589872 NDST4Q9H3R1 872 aa13.64□□□□□ -0.23
NBR1-205ENST00000589872 MYH3P11055 1940 aa13.64□□□□□ -0.23
NBR1-205ENST00000589872 SHANK3Q9BYB0 1731 aa13.64□□□□□ -0.23
NBR1-205ENST00000589872 AFF2P51816 1311 aa13.64□□□□□ -0.23
NBR1-205ENST00000589872 CYP7A1P22680 504 aa13.64□□□□□ -0.23
NBR1-205ENST00000589872 SATB1Q01826 763 aa13.64□□□□□ -0.23
NBR1-205ENST00000589872 SF3A3Q12874 501 aaKnown RBP eCLIP13.64□□□□□ -0.23
NBR1-205ENST00000589872 VWA3BQ502W6 1294 aa13.64□□□□□ -0.23
NBR1-205ENST00000589872 FAM114A1Q8IWE2 563 aa13.64□□□□□ -0.23
NBR1-205ENST00000589872 TEX11Q8IYF3 940 aa13.64□□□□□ -0.23
NBR1-205ENST00000589872 RAPGEF5Q92565 580 aa13.64□□□□□ -0.23
NBR1-205ENST00000589872 INPP4AQ96PE3 977 aaPredicted RBP13.64□□□□□ -0.23
NBR1-205ENST00000589872 NEUROG2Q9H2A3 272 aa13.64□□□□□ -0.23
NBR1-205ENST00000589872 PLCB1Q9NQ66 1216 aa13.64□□□□□ -0.23
NBR1-205ENST00000589872 MYH1P12882 1939 aa13.64□□□□□ -0.23
NBR1-205ENST00000589872 COL5A2P05997 1499 aaPredicted RBP13.63□□□□□ -0.23
NBR1-205ENST00000589872 BICDL2A1A5D9 508 aa13.63□□□□□ -0.23
NBR1-205ENST00000589872 SRRM3A6NNA2 597 aaPredicted RBP13.63□□□□□ -0.23
NBR1-205ENST00000589872 PHF20L1A8MW92 1017 aa13.63□□□□□ -0.23
NBR1-205ENST00000589872 GCOM1H8Y6P7 765 aaPredicted RBP13.63□□□□□ -0.23
NBR1-205ENST00000589872 MYZAPP0CAP1 466 aa13.63□□□□□ -0.23
NBR1-205ENST00000589872 PLCG1P19174 1290 aa13.63□□□□□ -0.23
NBR1-205ENST00000589872 ASIC1P78348 528 aa13.63□□□□□ -0.23
NBR1-205ENST00000589872 EHHADHQ08426 723 aa13.63□□□□□ -0.23
NBR1-205ENST00000589872 ZNF844Q08AG5 666 aa13.63□□□□□ -0.23
NBR1-205ENST00000589872 HGSNATQ68CP4 663 aa13.63□□□□□ -0.23
NBR1-205ENST00000589872 KIF6Q6ZMV9 814 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms