RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 CLK2P49760 499 aaKnown RBP11.17□□□□□ -0.62
VPS25-202ENST00000589219 ICA1Q05084 483 aa11.17□□□□□ -0.62
VPS25-202ENST00000589219 AP3B2Q13367 1082 aa11.17□□□□□ -0.62
VPS25-202ENST00000589219 RASA3Q14644 834 aa11.17□□□□□ -0.62
VPS25-202ENST00000589219 NR1I3Q14994 352 aa11.17□□□□□ -0.62
VPS25-202ENST00000589219 SPDYE2Q495Y8 402 aa11.17□□□□□ -0.62
VPS25-202ENST00000589219 COBLL1Q53SF7 1204 aa11.17□□□□□ -0.62
VPS25-202ENST00000589219 JAKMIP3Q5VZ66 844 aa11.17□□□□□ -0.62
VPS25-202ENST00000589219 E4F1Q66K89 784 aaPredicted RBP11.17□□□□□ -0.62
VPS25-202ENST00000589219 PPP4R3AQ6IN85 833 aa11.17□□□□□ -0.62
VPS25-202ENST00000589219 APTXQ7Z2E3 356 aaKnown RBP11.17□□□□□ -0.62
VPS25-202ENST00000589219 CLEC10AQ8IUN9 316 aa11.17□□□□□ -0.62
VPS25-202ENST00000589219 GMCL1P1Q8NEA9 526 aa11.17□□□□□ -0.62
VPS25-202ENST00000589219 ZNF296Q8WUU4 475 aaPredicted RBP11.17□□□□□ -0.62
VPS25-202ENST00000589219 NELFBQ8WX92 580 aa11.17□□□□□ -0.62
VPS25-202ENST00000589219 CCDC51Q96ER9 411 aa11.17□□□□□ -0.62
VPS25-202ENST00000589219 PPP1R13BQ96KQ4 1090 aa11.17□□□□□ -0.62
VPS25-202ENST00000589219 LRRC27Q9C0I9 530 aa11.17□□□□□ -0.62
VPS25-202ENST00000589219 SAMSN1Q9NSI8 373 aaKnown RBP11.17□□□□□ -0.62
VPS25-202ENST00000589219 BIN2Q9UBW5 565 aaPredicted RBP11.17□□□□□ -0.62
VPS25-202ENST00000589219 ZNF70Q9UC06 446 aaPredicted RBP11.17□□□□□ -0.62
VPS25-202ENST00000589219 ADD3Q9UEY8 706 aaKnown RBP11.17□□□□□ -0.62
VPS25-202ENST00000589219 PCDHAC2Q9Y5I4 1007 aa11.17□□□□□ -0.62
VPS25-202ENST00000589219 MYH4Q9Y623 1939 aa11.16□□□□□ -0.62
VPS25-202ENST00000589219 USP27XA6NNY8 438 aa11.16□□□□□ -0.62
VPS25-202ENST00000589219 PP2D1A8MPX8 630 aa11.16□□□□□ -0.62
VPS25-202ENST00000589219 STX10O60499 249 aa11.16□□□□□ -0.62
VPS25-202ENST00000589219 TPM1P09493 284 aa11.16□□□□□ -0.62
VPS25-202ENST00000589219 PBX1P40424 430 aa11.16□□□□□ -0.62
VPS25-202ENST00000589219 STX17P56962 302 aa11.16□□□□□ -0.62
VPS25-202ENST00000589219 ATP2B2Q01814 1243 aa11.16□□□□□ -0.62
VPS25-202ENST00000589219 NBPF12Q5TAG4 269 aaPredicted RBP11.16□□□□□ -0.62
VPS25-202ENST00000589219 SLFN13Q68D06 897 aa11.16□□□□□ -0.62
VPS25-202ENST00000589219 MOXD1Q6UVY6 613 aa11.16□□□□□ -0.62
VPS25-202ENST00000589219 ZSCAN29Q8IWY8 852 aaPredicted RBP11.16□□□□□ -0.62
VPS25-202ENST00000589219 ANKRD13AQ8IZ07 590 aa11.16□□□□□ -0.62
VPS25-202ENST00000589219 ADSSL1Q8N142 457 aa11.16□□□□□ -0.62
VPS25-202ENST00000589219 KIF18AQ8NI77 898 aa11.16□□□□□ -0.62
VPS25-202ENST00000589219 COA7Q96BR5 231 aa11.16□□□□□ -0.62
VPS25-202ENST00000589219 GMCL1Q96IK5 515 aa11.16□□□□□ -0.62
VPS25-202ENST00000589219 WNK4Q96J92 1243 aa11.16□□□□□ -0.62
VPS25-202ENST00000589219 MTMR9Q96QG7 549 aa11.16□□□□□ -0.62
VPS25-202ENST00000589219 PANX2Q96RD6 677 aa11.16□□□□□ -0.62
VPS25-202ENST00000589219 C7orf25Q9BPX7 421 aa11.16□□□□□ -0.62
VPS25-202ENST00000589219 NAA15Q9BXJ9 866 aaKnown RBP11.16□□□□□ -0.62
VPS25-202ENST00000589219 THAP9Q9H5L6 903 aa11.16□□□□□ -0.62
VPS25-202ENST00000589219 TDRD3Q9H7E2 651 aaKnown RBP11.16□□□□□ -0.62
VPS25-202ENST00000589219 EXOC1Q9NV70 894 aa11.16□□□□□ -0.62
VPS25-202ENST00000589219 TMEM260Q9NX78 707 aa11.16□□□□□ -0.62
VPS25-202ENST00000589219 HERC5Q9UII4 1024 aaKnown RBP11.16□□□□□ -0.62
VPS25-202ENST00000589219 SSC5DA1L4H1 1573 aa11.16□□□□□ -0.62
VPS25-202ENST00000589219 KDM3AQ9Y4C1 1321 aa11.15□□□□□ -0.62
VPS25-202ENST00000589219 BICDL2A1A5D9 508 aa11.15□□□□□ -0.62
VPS25-202ENST00000589219 DDTLA6NHG4 134 aaPredicted RBP11.15□□□□□ -0.62
VPS25-202ENST00000589219 AKR1B15C9JRZ8 316 aaPredicted RBP11.15□□□□□ -0.62
VPS25-202ENST00000589219 CTIFO43310 598 aaKnown RBP11.15□□□□□ -0.62
VPS25-202ENST00000589219 KLRC4O43908 158 aa11.15□□□□□ -0.62
VPS25-202ENST00000589219 PPP1R11O60927 126 aaPredicted RBP11.15□□□□□ -0.62
VPS25-202ENST00000589219 FKTNO75072 461 aa11.15□□□□□ -0.62
VPS25-202ENST00000589219 USP2O75604 605 aaPredicted RBP11.15□□□□□ -0.62
VPS25-202ENST00000589219 EEF2P13639 858 aaKnown RBP11.15□□□□□ -0.62
VPS25-202ENST00000589219 EEF1GP26641 437 aaKnown RBP11.15□□□□□ -0.62
VPS25-202ENST00000589219 SLC1A4P43007 532 aa11.15□□□□□ -0.62
VPS25-202ENST00000589219 TRAF1Q13077 416 aa11.15□□□□□ -0.62
VPS25-202ENST00000589219 PDIA5Q14554 519 aa11.15□□□□□ -0.62
VPS25-202ENST00000589219 CDC37Q16543 378 aaPredicted RBP11.15□□□□□ -0.62
VPS25-202ENST00000589219 ABCB5Q2M3G0 1257 aa11.15□□□□□ -0.62
VPS25-202ENST00000589219 KMT5BQ4FZB7 885 aa11.15□□□□□ -0.62
VPS25-202ENST00000589219 SH3BP5LQ7L8J4 393 aa11.15□□□□□ -0.62
VPS25-202ENST00000589219 PPFIBP1Q86W92 1011 aa11.15□□□□□ -0.62
VPS25-202ENST00000589219 IFNL1Q8IU54 200 aa11.15□□□□□ -0.62
VPS25-202ENST00000589219 TMEM139Q8IV31 216 aa11.15□□□□□ -0.62
VPS25-202ENST00000589219 CNGA4Q8IV77 575 aa11.15□□□□□ -0.62
VPS25-202ENST00000589219 ZFPM1Q8IX07 1006 aa11.15□□□□□ -0.62
VPS25-202ENST00000589219 SMYD4Q8IYR2 804 aaPredicted RBP11.15□□□□□ -0.62
VPS25-202ENST00000589219 GIMAP8Q8ND71 665 aaPredicted RBP11.15□□□□□ -0.62
VPS25-202ENST00000589219 STAMQ92783 540 aa11.15□□□□□ -0.62
VPS25-202ENST00000589219 DHTKD1Q96HY7 919 aaPredicted RBP11.15□□□□□ -0.62
VPS25-202ENST00000589219 CDK5RAP3Q96JB5 506 aa11.15□□□□□ -0.62
VPS25-202ENST00000589219 BAG1Q99933 345 aaPredicted RBP11.15□□□□□ -0.62
VPS25-202ENST00000589219 TRIM9Q9C026 710 aa11.15□□□□□ -0.62
VPS25-202ENST00000589219 FZD1Q9UP38 647 aa11.15□□□□□ -0.62
VPS25-202ENST00000589219 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.15□□□□□ -0.62
VPS25-202ENST00000589219 PHLPP2Q6ZVD8 1323 aa11.14□□□□□ -0.63
VPS25-202ENST00000589219 KCNJ18B7U540 433 aa11.14□□□□□ -0.63
VPS25-202ENST00000589219 USP17L10C9JJH3 530 aa11.14□□□□□ -0.63
VPS25-202ENST00000589219 TDP2O95551 362 aa11.14□□□□□ -0.63
VPS25-202ENST00000589219 CDC25AP30304 524 aa11.14□□□□□ -0.63
VPS25-202ENST00000589219 COPB1P53618 953 aaKnown RBP11.14□□□□□ -0.63
VPS25-202ENST00000589219 ASIC1P78348 528 aa11.14□□□□□ -0.63
VPS25-202ENST00000589219 TCP10Q12799 353 aa11.14□□□□□ -0.63
VPS25-202ENST00000589219 KCNJ12Q14500 433 aa11.14□□□□□ -0.63
VPS25-202ENST00000589219 KRT31Q15323 416 aa11.14□□□□□ -0.63
VPS25-202ENST00000589219 QRICH1Q2TAL8 776 aa11.14□□□□□ -0.63
VPS25-202ENST00000589219 TMEM119Q4V9L6 283 aa11.14□□□□□ -0.63
VPS25-202ENST00000589219 KRT79Q5XKE5 535 aa11.14□□□□□ -0.63
VPS25-202ENST00000589219 TTBK2Q6IQ55 1244 aa11.14□□□□□ -0.63
VPS25-202ENST00000589219 CNNM4Q6P4Q7 775 aa11.14□□□□□ -0.63
VPS25-202ENST00000589219 KCTD1Q719H9 257 aa11.14□□□□□ -0.63
VPS25-202ENST00000589219 FAM114A1Q8IWE2 563 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms