RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 AP5M1Q9H0R1 490 aa11.39□□□□□ -0.59
PTPN2-208ENST00000589216 SPC25Q9HBM1 224 aa11.39□□□□□ -0.59
PTPN2-208ENST00000589216 NCOA5Q9HCD5 579 aaKnown RBP11.39□□□□□ -0.59
PTPN2-208ENST00000589216 ZSWIM6Q9HCJ5 1215 aa11.39□□□□□ -0.59
PTPN2-208ENST00000589216 PRDM5Q9NQX1 630 aaPredicted RBP11.39□□□□□ -0.59
PTPN2-208ENST00000589216 RBM28Q9NW13 759 aaKnown RBP11.39□□□□□ -0.59
PTPN2-208ENST00000589216 STXBP3O00186 592 aa11.38□□□□□ -0.59
PTPN2-208ENST00000589216 ADAMTS3O15072 1205 aa11.38□□□□□ -0.59
PTPN2-208ENST00000589216 SORBS3O60504 671 aa11.38□□□□□ -0.59
PTPN2-208ENST00000589216 RCAN1P53805 252 aa11.38□□□□□ -0.59
PTPN2-208ENST00000589216 MRPS9P82933 396 aaKnown RBP11.38□□□□□ -0.59
PTPN2-208ENST00000589216 SEMA3FQ13275 785 aa11.38□□□□□ -0.59
PTPN2-208ENST00000589216 STXBP2Q15833 593 aa11.38□□□□□ -0.59
PTPN2-208ENST00000589216 FBXL16Q8N461 479 aa11.38□□□□□ -0.59
PTPN2-208ENST00000589216 PCSK9Q8NBP7 692 aaKnown RBP11.38□□□□□ -0.59
PTPN2-208ENST00000589216 PHKBQ93100 1093 aa11.38□□□□□ -0.59
PTPN2-208ENST00000589216 GLT1D1Q96MS3 346 aa11.38□□□□□ -0.59
PTPN2-208ENST00000589216 IWS1Q96ST2 819 aa11.38□□□□□ -0.59
PTPN2-208ENST00000589216 MPHOSPH6Q99547 160 aaKnown RBP11.38□□□□□ -0.59
PTPN2-208ENST00000589216 Q9Y3F1 56 aa11.38□□□□□ -0.59
PTPN2-208ENST00000589216 SZT2Q5T011 3432 aa11.38□□□□□ -0.59
PTPN2-208ENST00000589216 ELP1O95163 1332 aa11.37□□□□□ -0.59
PTPN2-208ENST00000589216 A0A0U1RQG5 324 aaPredicted RBP11.37□□□□□ -0.59
PTPN2-208ENST00000589216 B4DLN1 442 aa11.37□□□□□ -0.59
PTPN2-208ENST00000589216 RBAK-RBAKDNI3L0D1 243 aa11.37□□□□□ -0.59
PTPN2-208ENST00000589216 PIK3CDO00329 1044 aa11.37□□□□□ -0.59
PTPN2-208ENST00000589216 DTNBO60941 627 aa11.37□□□□□ -0.59
PTPN2-208ENST00000589216 EIF3JO75822 258 aaKnown RBP11.37□□□□□ -0.59
PTPN2-208ENST00000589216 UBA1P22314 1058 aaKnown RBP11.37□□□□□ -0.59
PTPN2-208ENST00000589216 KCNA4P22459 653 aa11.37□□□□□ -0.59
PTPN2-208ENST00000589216 PSMA5P28066 241 aa11.37□□□□□ -0.59
PTPN2-208ENST00000589216 CDK7P50613 346 aa11.37□□□□□ -0.59
PTPN2-208ENST00000589216 MRPL12P52815 198 aaKnown RBP11.37□□□□□ -0.59
PTPN2-208ENST00000589216 EVCP57679 992 aa11.37□□□□□ -0.59
PTPN2-208ENST00000589216 PURAQ00577 322 aaKnown RBP11.37□□□□□ -0.59
PTPN2-208ENST00000589216 FAAP100Q0VG06 881 aa11.37□□□□□ -0.59
PTPN2-208ENST00000589216 TRAF1Q13077 416 aa11.37□□□□□ -0.59
PTPN2-208ENST00000589216 TTLL4Q14679 1199 aa11.37□□□□□ -0.59
PTPN2-208ENST00000589216 NTRK3Q16288 839 aa11.37□□□□□ -0.59
PTPN2-208ENST00000589216 ANKRD33Q7Z3H0 272 aa11.37□□□□□ -0.59
PTPN2-208ENST00000589216 VSIG10LQ86VR7 867 aa11.37□□□□□ -0.59
PTPN2-208ENST00000589216 FAM126BQ8IXS8 530 aa11.37□□□□□ -0.59
PTPN2-208ENST00000589216 SMARCC2Q8TAQ2 1214 aa11.37□□□□□ -0.59
PTPN2-208ENST00000589216 AFG1LQ8WV93 481 aa11.37□□□□□ -0.59
PTPN2-208ENST00000589216 PGBD1Q96JS3 809 aa11.37□□□□□ -0.59
PTPN2-208ENST00000589216 TM6SF1Q9BZW5 370 aa11.37□□□□□ -0.59
PTPN2-208ENST00000589216 BCAS3Q9H6U6 928 aa11.37□□□□□ -0.59
PTPN2-208ENST00000589216 MAP3K20Q9NYL2 800 aaKnown RBP11.37□□□□□ -0.59
PTPN2-208ENST00000589216 DDX41Q9UJV9 622 aaKnown RBP11.37□□□□□ -0.59
PTPN2-208ENST00000589216 TBX21Q9UL17 535 aa11.37□□□□□ -0.59
PTPN2-208ENST00000589216 TELO2Q9Y4R8 837 aa11.37□□□□□ -0.59
PTPN2-208ENST00000589216 MRVI1Q9Y6F6 885 aa11.37□□□□□ -0.59
PTPN2-208ENST00000589216 V9GY48 417 aaPredicted RBP11.37□□□□□ -0.59
PTPN2-208ENST00000589216 LAMA2P24043 3122 aaKnown RBP11.37□□□□□ -0.59
PTPN2-208ENST00000589216 SCN5AQ14524 2016 aa11.36□□□□□ -0.59
PTPN2-208ENST00000589216 A6NJR5 290 aa11.36□□□□□ -0.59
PTPN2-208ENST00000589216 SOX1O00570 391 aaPredicted RBP11.36□□□□□ -0.59
PTPN2-208ENST00000589216 MMP3P08254 477 aa11.36□□□□□ -0.59
PTPN2-208ENST00000589216 MYL3P08590 195 aa11.36□□□□□ -0.59
PTPN2-208ENST00000589216 CLTBP09497 229 aa11.36□□□□□ -0.59
PTPN2-208ENST00000589216 PDIA3P30101 505 aaKnown RBP11.36□□□□□ -0.59
PTPN2-208ENST00000589216 CCND2P30279 289 aa11.36□□□□□ -0.59
PTPN2-208ENST00000589216 FXR1P51114 621 aaKnown RBP eCLIP11.36□□□□□ -0.59
PTPN2-208ENST00000589216 NAPAP54920 295 aa11.36□□□□□ -0.59
PTPN2-208ENST00000589216 CCT2P78371 535 aaKnown RBP11.36□□□□□ -0.59
PTPN2-208ENST00000589216 SP2Q02086 613 aa11.36□□□□□ -0.59
PTPN2-208ENST00000589216 PKN1Q16512 942 aa11.36□□□□□ -0.59
PTPN2-208ENST00000589216 C8orf34Q49A92 452 aa11.36□□□□□ -0.59
PTPN2-208ENST00000589216 SAMD3Q8N6K7 520 aa11.36□□□□□ -0.59
PTPN2-208ENST00000589216 SLC43A3Q8NBI5 491 aa11.36□□□□□ -0.59
PTPN2-208ENST00000589216 INPP4AQ96PE3 977 aaPredicted RBP11.36□□□□□ -0.59
PTPN2-208ENST00000589216 PSTPIP2Q9H939 334 aa11.36□□□□□ -0.59
PTPN2-208ENST00000589216 CYP46A1Q9Y6A2 500 aa11.36□□□□□ -0.59
PTPN2-208ENST00000589216 UMODL1Q5DID0 1318 aa11.35□□□□□ -0.59
PTPN2-208ENST00000589216 ARVCFO00192 962 aa11.35□□□□□ -0.59
PTPN2-208ENST00000589216 KIAA0355O15063 1070 aa11.35□□□□□ -0.59
PTPN2-208ENST00000589216 NKRFO15226 690 aaKnown RBP eCLIP11.35□□□□□ -0.59
PTPN2-208ENST00000589216 GH1P01241 217 aa11.35□□□□□ -0.59
PTPN2-208ENST00000589216 ZNF286BP0CG31 522 aa11.35□□□□□ -0.59
PTPN2-208ENST00000589216 CPT1AP50416 773 aa11.35□□□□□ -0.59
PTPN2-208ENST00000589216 ITGA7Q13683 1181 aa11.35□□□□□ -0.59
PTPN2-208ENST00000589216 PFKFB3Q16875 520 aaPredicted RBP11.35□□□□□ -0.59
PTPN2-208ENST00000589216 PPP1R18Q6NYC8 613 aa11.35□□□□□ -0.59
PTPN2-208ENST00000589216 BADQ92934 168 aa11.35□□□□□ -0.59
PTPN2-208ENST00000589216 VTI1AQ96AJ9 217 aa11.35□□□□□ -0.59
PTPN2-208ENST00000589216 TMEM260Q9NX78 707 aa11.35□□□□□ -0.59
PTPN2-208ENST00000589216 BARHL2Q9NY43 387 aa11.35□□□□□ -0.59
PTPN2-208ENST00000589216 TRIP12Q14669 1992 aaPredicted RBP11.34□□□□□ -0.59
PTPN2-208ENST00000589216 B4GALT4O60513 344 aa11.34□□□□□ -0.59
PTPN2-208ENST00000589216 LARGE1O95461 756 aa11.34□□□□□ -0.59
PTPN2-208ENST00000589216 GGPS1O95749 300 aa11.34□□□□□ -0.59
PTPN2-208ENST00000589216 CD4P01730 458 aa11.34□□□□□ -0.59
PTPN2-208ENST00000589216 SCG2P13521 617 aa11.34□□□□□ -0.59
PTPN2-208ENST00000589216 BMP8BP34820 402 aa11.34□□□□□ -0.59
PTPN2-208ENST00000589216 ADCY7P51828 1080 aa11.34□□□□□ -0.59
PTPN2-208ENST00000589216 EPHB4P54760 987 aa11.34□□□□□ -0.59
PTPN2-208ENST00000589216 STK3Q13188 491 aa11.34□□□□□ -0.59
PTPN2-208ENST00000589216 HSDL1Q3SXM5 330 aa11.34□□□□□ -0.59
PTPN2-208ENST00000589216 PCNX4Q63HM2 1172 aa11.34□□□□□ -0.59
PTPN2-208ENST00000589216 KAT2BQ92831 832 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms