RNA–Protein interactions for RNA: ENST00000589214.1

ERCC1-209, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-209ENST00000589214 GRIN2DO15399 1336 aa17.56■□□□□ 0.4
ERCC1-209ENST00000589214 ZBTB43O43298 467 aa17.56■□□□□ 0.4
ERCC1-209ENST00000589214 PURAQ00577 322 aaKnown RBP17.56■□□□□ 0.4
ERCC1-209ENST00000589214 PGM5Q15124 567 aa17.56■□□□□ 0.4
ERCC1-209ENST00000589214 BRDTQ58F21 947 aaPredicted RBP17.56■□□□□ 0.4
ERCC1-209ENST00000589214 CCDC62Q6P9F0 684 aa17.56■□□□□ 0.4
ERCC1-209ENST00000589214 TMTC3Q6ZXV5 915 aa17.56■□□□□ 0.4
ERCC1-209ENST00000589214 SAMD3Q8N6K7 520 aa17.56■□□□□ 0.4
ERCC1-209ENST00000589214 UPF3BQ9BZI7 483 aaKnown RBP17.56■□□□□ 0.4
ERCC1-209ENST00000589214 ZSWIM6Q9HCJ5 1215 aa17.56■□□□□ 0.4
ERCC1-209ENST00000589214 GH1P01241 217 aa17.55■□□□□ 0.4
ERCC1-209ENST00000589214 SMARCA1P28370 1054 aa17.55■□□□□ 0.4
ERCC1-209ENST00000589214 LY6KQ17RY6 165 aa17.55■□□□□ 0.4
ERCC1-209ENST00000589214 LRIT3Q3SXY7 679 aa17.55■□□□□ 0.4
ERCC1-209ENST00000589214 C9orf50Q5SZB4 431 aa17.55■□□□□ 0.4
ERCC1-209ENST00000589214 RUFY3Q7L099 469 aa17.55■□□□□ 0.4
ERCC1-209ENST00000589214 SLC43A3Q8NBI5 491 aa17.55■□□□□ 0.4
ERCC1-209ENST00000589214 LARP6Q9BRS8 491 aaKnown RBP17.55■□□□□ 0.4
ERCC1-209ENST00000589214 PPP1R12CQ9BZL4 782 aa17.55■□□□□ 0.4
ERCC1-209ENST00000589214 MRVI1Q9Y6F6 885 aa17.55■□□□□ 0.4
ERCC1-209ENST00000589214 CNTNAP5Q8WYK1 1306 aa17.54■□□□□ 0.4
ERCC1-209ENST00000589214 GOLGA8AA7E2F4 631 aa17.54■□□□□ 0.4
ERCC1-209ENST00000589214 GOLGA8BA8MQT2 603 aa17.54■□□□□ 0.4
ERCC1-209ENST00000589214 EIF3JO75822 258 aaKnown RBP17.54■□□□□ 0.4
ERCC1-209ENST00000589214 CDC27P30260 824 aa17.54■□□□□ 0.4
ERCC1-209ENST00000589214 FPGSQ05932 587 aa17.54■□□□□ 0.4
ERCC1-209ENST00000589214 ARHGAP1Q07960 439 aa17.54■□□□□ 0.4
ERCC1-209ENST00000589214 SHHQ15465 462 aa17.54■□□□□ 0.4
ERCC1-209ENST00000589214 RTN1Q16799 776 aa17.54■□□□□ 0.4
ERCC1-209ENST00000589214 ZFP91Q96JP5 570 aaPredicted RBP17.54■□□□□ 0.4
ERCC1-209ENST00000589214 MTG1Q9BT17 334 aaPredicted RBP17.54■□□□□ 0.4
ERCC1-209ENST00000589214 CYP46A1Q9Y6A2 500 aa17.54■□□□□ 0.4
ERCC1-209ENST00000589214 A6NJR5 290 aa17.53■□□□□ 0.4
ERCC1-209ENST00000589214 B4GALT4O60513 344 aa17.53■□□□□ 0.4
ERCC1-209ENST00000589214 CD4P01730 458 aa17.53■□□□□ 0.4
ERCC1-209ENST00000589214 CCND2P30279 289 aa17.53■□□□□ 0.4
ERCC1-209ENST00000589214 EPHB4P54760 987 aa17.53■□□□□ 0.4
ERCC1-209ENST00000589214 SMARCC2Q8TAQ2 1214 aa17.53■□□□□ 0.4
ERCC1-209ENST00000589214 PPP1R13LQ8WUF5 828 aa17.53■□□□□ 0.4
ERCC1-209ENST00000589214 AFG1LQ8WV93 481 aa17.53■□□□□ 0.4
ERCC1-209ENST00000589214 CUL5Q93034 780 aa17.53■□□□□ 0.4
ERCC1-209ENST00000589214 FAM217BQ9NTX9 383 aaPredicted RBP17.53■□□□□ 0.4
ERCC1-209ENST00000589214 SCN10AQ9Y5Y9 1956 aa17.53■□□□□ 0.4
ERCC1-209ENST00000589214 FRMPD4Q14CM0 1322 aa17.52■□□□□ 0.4
ERCC1-209ENST00000589214 RGS20O76081 388 aa17.52■□□□□ 0.4
ERCC1-209ENST00000589214 TIMP1P01033 207 aa17.52■□□□□ 0.4
ERCC1-209ENST00000589214 MMP3P08254 477 aa17.52■□□□□ 0.4
ERCC1-209ENST00000589214 ADD1P35611 737 aaKnown RBP17.52■□□□□ 0.4
ERCC1-209ENST00000589214 TOB2Q14106 344 aaPredicted RBP17.52■□□□□ 0.4
ERCC1-209ENST00000589214 FAM47CQ5HY64 1035 aa17.52■□□□□ 0.4
ERCC1-209ENST00000589214 USP17L6PQ6QN14 398 aa17.52■□□□□ 0.4
ERCC1-209ENST00000589214 HEATR3Q7Z4Q2 680 aa17.52■□□□□ 0.4
ERCC1-209ENST00000589214 GPKOWQ92917 476 aaPredicted RBP eCLIP17.52■□□□□ 0.4
ERCC1-209ENST00000589214 TM6SF1Q9BZW5 370 aa17.52■□□□□ 0.4
ERCC1-209ENST00000589214 TRPV6Q9H1D0 765 aa17.52■□□□□ 0.4
ERCC1-209ENST00000589214 RBM28Q9NW13 759 aaKnown RBP17.52■□□□□ 0.4
ERCC1-209ENST00000589214 DDX41Q9UJV9 622 aaKnown RBP17.52■□□□□ 0.4
ERCC1-209ENST00000589214 SORBS3O60504 671 aa17.51■□□□□ 0.39
ERCC1-209ENST00000589214 KPNA6O60684 536 aa17.51■□□□□ 0.39
ERCC1-209ENST00000589214 METAP2P50579 478 aaKnown RBP eCLIP17.51■□□□□ 0.39
ERCC1-209ENST00000589214 CHMP4BP1P59074 171 aa17.51■□□□□ 0.39
ERCC1-209ENST00000589214 C8orf34Q49A92 452 aa17.51■□□□□ 0.39
ERCC1-209ENST00000589214 VSIG10LQ86VR7 867 aa17.51■□□□□ 0.39
ERCC1-209ENST00000589214 SEZ6LQ9BYH1 1024 aa17.51■□□□□ 0.39
ERCC1-209ENST00000589214 AGXT2Q9BYV1 514 aa17.51■□□□□ 0.39
ERCC1-209ENST00000589214 ALDH8A1Q9H2A2 487 aaPredicted RBP17.51■□□□□ 0.39
ERCC1-209ENST00000589214 HIPK3Q9H422 1215 aa17.51■□□□□ 0.39
ERCC1-209ENST00000589214 UMODL1Q5DID0 1318 aa17.5■□□□□ 0.39
ERCC1-209ENST00000589214 PPFIA3O75145 1194 aa17.5■□□□□ 0.39
ERCC1-209ENST00000589214 UBA1P22314 1058 aaKnown RBP17.5■□□□□ 0.39
ERCC1-209ENST00000589214 CYP2C18P33260 490 aa17.5■□□□□ 0.39
ERCC1-209ENST00000589214 CCT2P78371 535 aaKnown RBP17.5■□□□□ 0.39
ERCC1-209ENST00000589214 FUT2Q10981 343 aa17.5■□□□□ 0.39
ERCC1-209ENST00000589214 UBE2SQ16763 222 aa17.5■□□□□ 0.39
ERCC1-209ENST00000589214 NBPF20Q3BBV1 942 aa17.5■□□□□ 0.39
ERCC1-209ENST00000589214 MFSD5Q6N075 450 aa17.5■□□□□ 0.39
ERCC1-209ENST00000589214 DHX37Q8IY37 1157 aaKnown RBP17.5■□□□□ 0.39
ERCC1-209ENST00000589214 FBXL16Q8N461 479 aa17.5■□□□□ 0.39
ERCC1-209ENST00000589214 RNPC3Q96LT9 517 aaKnown RBP17.5■□□□□ 0.39
ERCC1-209ENST00000589214 PDRG1Q9NUG6 133 aa17.5■□□□□ 0.39
ERCC1-209ENST00000589214 TRMT13Q9NUP7 481 aaKnown RBP17.5■□□□□ 0.39
ERCC1-209ENST00000589214 V9GY48 417 aaPredicted RBP17.5■□□□□ 0.39
ERCC1-209ENST00000589214 PIK3CDO00329 1044 aa17.49■□□□□ 0.39
ERCC1-209ENST00000589214 MEIS2O14770 477 aa17.49■□□□□ 0.39
ERCC1-209ENST00000589214 GGPS1O95749 300 aa17.49■□□□□ 0.39
ERCC1-209ENST00000589214 CSF2RAP15509 400 aa17.49■□□□□ 0.39
ERCC1-209ENST00000589214 WWC2Q6AWC2 1192 aa17.49■□□□□ 0.39
ERCC1-209ENST00000589214 TMEM199Q8N511 208 aa17.49■□□□□ 0.39
ERCC1-209ENST00000589214 PSTPIP2Q9H939 334 aa17.49■□□□□ 0.39
ERCC1-209ENST00000589214 GTF3C3Q9Y5Q9 886 aa17.49■□□□□ 0.39
ERCC1-209ENST00000589214 MYH7BA7E2Y1 1941 aa17.49■□□□□ 0.39
ERCC1-209ENST00000589214 ZNF286BP0CG31 522 aa17.48■□□□□ 0.39
ERCC1-209ENST00000589214 CYP2C9P11712 490 aa17.48■□□□□ 0.39
ERCC1-209ENST00000589214 PDIA3P30101 505 aaKnown RBP17.48■□□□□ 0.39
ERCC1-209ENST00000589214 MRPS9P82933 396 aaKnown RBP17.48■□□□□ 0.39
ERCC1-209ENST00000589214 PPIGQ13427 754 aaKnown RBP eCLIP17.48■□□□□ 0.392e-6■□□□□ 8.5
ERCC1-209ENST00000589214 LAMC2Q13753 1193 aa17.48■□□□□ 0.39
ERCC1-209ENST00000589214 DGKDQ16760 1214 aa17.48■□□□□ 0.39
ERCC1-209ENST00000589214 GNPTABQ3T906 1256 aa17.48■□□□□ 0.39
ERCC1-209ENST00000589214 KCNV1Q6PIU1 500 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms