RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 B4DLN1 442 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 MPHOSPH10O00566 681 aaKnown RBP7.96□□□□□ -1.14
SPIDR-228ENST00000588781 TBX3O15119 743 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 GRIN3BO60391 1043 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 SLC34A2O95436 690 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 CDC25AP30304 524 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 HNRNPH3P31942 346 aaKnown RBP7.96□□□□□ -1.14
SPIDR-228ENST00000588781 VAV2P52735 878 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 FKBP3Q00688 224 aaKnown RBP7.96□□□□□ -1.14
SPIDR-228ENST00000588781 PICALMQ13492 652 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 TERF2Q15554 542 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 GRIK5Q16478 980 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 SLC35G1Q2M3R5 365 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 HYIQ5T013 277 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 ANKRD40Q6AI12 368 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 SMIM5Q71RC9 77 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 POTEDQ86YR6 584 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 MYOCDQ8IZQ8 938 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 GOLGA6L1Q8N7Z2 621 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 ACRBPQ8NEB7 543 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 TRIM58Q8NG06 486 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 NEK11Q8NG66 645 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 MTMR8Q96EF0 704 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 PARD6BQ9BYG5 372 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 UBA5Q9GZZ9 404 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 DEF6Q9H4E7 631 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 PSTPIP2Q9H939 334 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 EHMT1Q9H9B1 1298 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 KANSL2Q9H9L4 492 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 GPCPD1Q9NPB8 672 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 FAM184BQ9ULE4 1060 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 MAPK8IP1Q9UQF2 711 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 FHOD1Q9Y613 1164 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 SAR1BQ9Y6B6 198 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 FRMPD2Q68DX3 1309 aaPredicted RBP7.96□□□□□ -1.14
SPIDR-228ENST00000588781 SSU72P8A0A1W2PR75 194 aa7.95□□□□□ -1.14
SPIDR-228ENST00000588781 TARSL2A2RTX5 802 aaKnown RBP7.95□□□□□ -1.14
SPIDR-228ENST00000588781 IDEP14735 1019 aa7.95□□□□□ -1.14
SPIDR-228ENST00000588781 AKR1B1P15121 316 aa7.95□□□□□ -1.14
SPIDR-228ENST00000588781 YBX3P16989 372 aaKnown RBP eCLIP7.95□□□□□ -1.14
SPIDR-228ENST00000588781 ARHGAP25P42331 645 aa7.95□□□□□ -1.14
SPIDR-228ENST00000588781 CLK2P49760 499 aaKnown RBP7.95□□□□□ -1.14
SPIDR-228ENST00000588781 PRELPP51888 382 aa7.95□□□□□ -1.14
SPIDR-228ENST00000588781 GRB10Q13322 594 aa7.95□□□□□ -1.14
SPIDR-228ENST00000588781 MCM6Q14566 821 aa7.95□□□□□ -1.14
SPIDR-228ENST00000588781 PTPN21Q16825 1174 aa7.95□□□□□ -1.14
SPIDR-228ENST00000588781 LONRF2Q1L5Z9 754 aa7.95□□□□□ -1.14
SPIDR-228ENST00000588781 CCDC40Q4G0X9 1142 aa7.95□□□□□ -1.14
SPIDR-228ENST00000588781 GRIPAP1Q4V328 841 aa7.95□□□□□ -1.14
SPIDR-228ENST00000588781 HSP90B2PQ58FF3 399 aa7.95□□□□□ -1.14
SPIDR-228ENST00000588781 PAPD7Q5XG87 772 aaKnown RBP7.95□□□□□ -1.14
SPIDR-228ENST00000588781 WDR93Q6P2C0 686 aa7.95□□□□□ -1.14
SPIDR-228ENST00000588781 CACNA2D4Q7Z3S7 1137 aa7.95□□□□□ -1.14
SPIDR-228ENST00000588781 FMNL3Q8IVF7 1028 aa7.95□□□□□ -1.14
SPIDR-228ENST00000588781 ADGRF4Q8IZF3 695 aa7.95□□□□□ -1.14
SPIDR-228ENST00000588781 LRRC47Q8N1G4 583 aaKnown RBP7.95□□□□□ -1.14
SPIDR-228ENST00000588781 SUPT20HQ8NEM7 779 aa7.95□□□□□ -1.14
SPIDR-228ENST00000588781 CAGE1Q8TC20 777 aa7.95□□□□□ -1.14
SPIDR-228ENST00000588781 SYN2Q92777 582 aaPredicted RBP7.95□□□□□ -1.14
SPIDR-228ENST00000588781 SECISBP2LQ93073 1101 aaKnown RBP7.95□□□□□ -1.14
SPIDR-228ENST00000588781 MKL1Q969V6 931 aa7.95□□□□□ -1.14
SPIDR-228ENST00000588781 MASTLQ96GX5 879 aa7.95□□□□□ -1.14
SPIDR-228ENST00000588781 ZDHHC15Q96MV8 337 aa7.95□□□□□ -1.14
SPIDR-228ENST00000588781 GPR101Q96P66 508 aaPredicted RBP7.95□□□□□ -1.14
SPIDR-228ENST00000588781 PLIN2Q99541 437 aa7.95□□□□□ -1.14
SPIDR-228ENST00000588781 MMTAG2Q9BU76 263 aaKnown RBP7.95□□□□□ -1.14
SPIDR-228ENST00000588781 NDST4Q9H3R1 872 aa7.95□□□□□ -1.14
SPIDR-228ENST00000588781 NHEJ1Q9H9Q4 299 aaPredicted RBP7.95□□□□□ -1.14
SPIDR-228ENST00000588781 JMJD4Q9H9V9 463 aa7.95□□□□□ -1.14
SPIDR-228ENST00000588781 GPBP1L1Q9HC44 474 aaPredicted RBP7.95□□□□□ -1.14
SPIDR-228ENST00000588781 PRDM10Q9NQV6 1147 aa7.95□□□□□ -1.14
SPIDR-228ENST00000588781 ZNF446Q9NWS9 450 aa7.95□□□□□ -1.14
SPIDR-228ENST00000588781 PI4KBQ9UBF8 816 aa7.95□□□□□ -1.14
SPIDR-228ENST00000588781 RNF14Q9UBS8 474 aa7.95□□□□□ -1.14
SPIDR-228ENST00000588781 GUCA1BQ9UMX6 200 aa7.95□□□□□ -1.14
SPIDR-228ENST00000588781 PCDHA12Q9UN75 941 aa7.95□□□□□ -1.14
SPIDR-228ENST00000588781 PITPNM2Q9BZ72 1349 aa7.95□□□□□ -1.14
SPIDR-228ENST00000588781 MYH8P13535 1937 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 CYP3A7-CYP3A51PA0A087WV96 503 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 MYMKA6NI61 221 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 KRT18P05783 430 aaKnown RBP7.94□□□□□ -1.14
SPIDR-228ENST00000588781 PRLRP16471 622 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 CYP3A7P24462 503 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 ANXA13P27216 316 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 EPS15P42566 896 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 SLC1A4P43007 532 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 CRKP46108 304 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 ATP2B2Q01814 1243 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 ITIH3Q06033 890 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 DDR1Q08345 913 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 STK4Q13043 487 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 SMC1AQ14683 1233 aaKnown RBP7.94□□□□□ -1.14
SPIDR-228ENST00000588781 EDRF1Q3B7T1 1238 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 FAM26FQ5R3K3 315 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 C10orf76Q5T2E6 689 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 COL13A1Q5TAT6 717 aaPredicted RBP7.94□□□□□ -1.14
SPIDR-228ENST00000588781 STRIP1Q5VSL9 837 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 CC2D2BQ6DHV5 1058 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 TMEM179Q6ZVK1 233 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 TRAPPC11Q7Z392 1133 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms