RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 GUCD1Q96NT3 240 aa10.22□□□□□ -0.77
SDF2-207ENST00000588472 IWS1Q96ST2 819 aa10.22□□□□□ -0.77
SDF2-207ENST00000588472 Q9Y3F1 56 aa10.22□□□□□ -0.77
SDF2-207ENST00000588472 MRVI1Q9Y6F6 885 aa10.22□□□□□ -0.77
SDF2-207ENST00000588472 ELP1O95163 1332 aa10.22□□□□□ -0.77
SDF2-207ENST00000588472 GOLGA8AA7E2F4 631 aa10.21□□□□□ -0.77
SDF2-207ENST00000588472 GOLGA8BA8MQT2 603 aa10.21□□□□□ -0.77
SDF2-207ENST00000588472 HMGB1P09429 215 aaKnown RBP10.21□□□□□ -0.77
SDF2-207ENST00000588472 CASTP20810 708 aaKnown RBP10.21□□□□□ -0.77
SDF2-207ENST00000588472 ITGB8P26012 769 aa10.21□□□□□ -0.77
SDF2-207ENST00000588472 HSPA4P34932 840 aa10.21□□□□□ -0.77
SDF2-207ENST00000588472 CDK7P50613 346 aa10.21□□□□□ -0.77
SDF2-207ENST00000588472 APOBRQ0VD83 1088 aa10.21□□□□□ -0.77
SDF2-207ENST00000588472 BRDTQ58F21 947 aaPredicted RBP10.21□□□□□ -0.77
SDF2-207ENST00000588472 FAM47CQ5HY64 1035 aa10.21□□□□□ -0.77
SDF2-207ENST00000588472 C1orf53Q5VUE5 145 aa10.21□□□□□ -0.77
SDF2-207ENST00000588472 APOA5Q6Q788 366 aa10.21□□□□□ -0.77
SDF2-207ENST00000588472 USP17L6PQ6QN14 398 aa10.21□□□□□ -0.77
SDF2-207ENST00000588472 TMTC3Q6ZXV5 915 aa10.21□□□□□ -0.77
SDF2-207ENST00000588472 ANKRD33Q7Z3H0 272 aa10.21□□□□□ -0.77
SDF2-207ENST00000588472 SGMS1Q86VZ5 419 aa10.21□□□□□ -0.77
SDF2-207ENST00000588472 IL31RAQ8NI17 732 aa10.21□□□□□ -0.77
SDF2-207ENST00000588472 AFG1LQ8WV93 481 aa10.21□□□□□ -0.77
SDF2-207ENST00000588472 GPKOWQ92917 476 aaPredicted RBP eCLIP10.21□□□□□ -0.77
SDF2-207ENST00000588472 CUL5Q93034 780 aa10.21□□□□□ -0.77
SDF2-207ENST00000588472 PDCD2LQ9BRP1 358 aa10.21□□□□□ -0.77
SDF2-207ENST00000588472 PPP1R12CQ9BZL4 782 aa10.21□□□□□ -0.77
SDF2-207ENST00000588472 TRPV6Q9H1D0 765 aa10.21□□□□□ -0.77
SDF2-207ENST00000588472 RTEL1Q9NZ71 1219 aa10.21□□□□□ -0.77
SDF2-207ENST00000588472 KIAA0355O15063 1070 aa10.2□□□□□ -0.78
SDF2-207ENST00000588472 NKRFO15226 690 aaKnown RBP eCLIP10.2□□□□□ -0.78
SDF2-207ENST00000588472 GRIN2DO15399 1336 aa10.2□□□□□ -0.78
SDF2-207ENST00000588472 TLR3O15455 904 aaKnown RBP10.2□□□□□ -0.78
SDF2-207ENST00000588472 CABYRO75952 493 aa10.2□□□□□ -0.78
SDF2-207ENST00000588472 GH1P01241 217 aa10.2□□□□□ -0.78
SDF2-207ENST00000588472 CCND2P30279 289 aa10.2□□□□□ -0.78
SDF2-207ENST00000588472 NKX3-2P78367 333 aa10.2□□□□□ -0.78
SDF2-207ENST00000588472 PGM5Q15124 567 aa10.2□□□□□ -0.78
SDF2-207ENST00000588472 UBE2SQ16763 222 aa10.2□□□□□ -0.78
SDF2-207ENST00000588472 ERICH6BQ5W0A0 696 aa10.2□□□□□ -0.78
SDF2-207ENST00000588472 MROH7Q68CQ1 1323 aa10.2□□□□□ -0.78
SDF2-207ENST00000588472 CCDC62Q6P9F0 684 aa10.2□□□□□ -0.78
SDF2-207ENST00000588472 BRF1Q92994 677 aa10.2□□□□□ -0.78
SDF2-207ENST00000588472 LARP6Q9BRS8 491 aaKnown RBP10.2□□□□□ -0.78
SDF2-207ENST00000588472 MTG1Q9BT17 334 aaPredicted RBP10.2□□□□□ -0.78
SDF2-207ENST00000588472 MAF1Q9H063 256 aa10.2□□□□□ -0.78
SDF2-207ENST00000588472 PSTPIP2Q9H939 334 aa10.2□□□□□ -0.78
SDF2-207ENST00000588472 PRDM6Q9NQX0 595 aa10.2□□□□□ -0.78
SDF2-207ENST00000588472 POLR3EQ9NVU0 708 aa10.2□□□□□ -0.78
SDF2-207ENST00000588472 RBM28Q9NW13 759 aaKnown RBP10.2□□□□□ -0.78
SDF2-207ENST00000588472 MAP3K20Q9NYL2 800 aaKnown RBP10.2□□□□□ -0.78
SDF2-207ENST00000588472 V9GY48 417 aaPredicted RBP10.2□□□□□ -0.78
SDF2-207ENST00000588472 PPFIA3O75145 1194 aa10.19□□□□□ -0.78
SDF2-207ENST00000588472 RPS6KB1P23443 525 aa10.19□□□□□ -0.78
SDF2-207ENST00000588472 SMARCA1P28370 1054 aa10.19□□□□□ -0.78
SDF2-207ENST00000588472 ADD1P35611 737 aaKnown RBP10.19□□□□□ -0.78
SDF2-207ENST00000588472 PURAQ00577 322 aaKnown RBP10.19□□□□□ -0.78
SDF2-207ENST00000588472 ARHGAP1Q07960 439 aa10.19□□□□□ -0.78
SDF2-207ENST00000588472 SHHQ15465 462 aa10.19□□□□□ -0.78
SDF2-207ENST00000588472 C9orf50Q5SZB4 431 aa10.19□□□□□ -0.78
SDF2-207ENST00000588472 VSIG10LQ86VR7 867 aa10.19□□□□□ -0.78
SDF2-207ENST00000588472 FAM126BQ8IXS8 530 aa10.19□□□□□ -0.78
SDF2-207ENST00000588472 DHX37Q8IY37 1157 aaKnown RBP10.19□□□□□ -0.78
SDF2-207ENST00000588472 SAMD3Q8N6K7 520 aa10.19□□□□□ -0.78
SDF2-207ENST00000588472 MAFAQ8NHW3 353 aaPredicted RBP10.19□□□□□ -0.78
SDF2-207ENST00000588472 KCNB2Q92953 911 aa10.19□□□□□ -0.78
SDF2-207ENST00000588472 TOX2Q96NM4 488 aa10.19□□□□□ -0.78
SDF2-207ENST00000588472 DDX41Q9UJV9 622 aaKnown RBP10.19□□□□□ -0.78
SDF2-207ENST00000588472 UNC80Q8N2C7 3258 aa10.19□□□□□ -0.78
SDF2-207ENST00000588472 A6NJR5 290 aa10.18□□□□□ -0.78
SDF2-207ENST00000588472 MEIS2O14770 477 aa10.18□□□□□ -0.78
SDF2-207ENST00000588472 B4GALT4O60513 344 aa10.18□□□□□ -0.78
SDF2-207ENST00000588472 KPNA6O60684 536 aa10.18□□□□□ -0.78
SDF2-207ENST00000588472 TIMP1P01033 207 aa10.18□□□□□ -0.78
SDF2-207ENST00000588472 PSMA5P28066 241 aa10.18□□□□□ -0.78
SDF2-207ENST00000588472 CDC27P30260 824 aa10.18□□□□□ -0.78
SDF2-207ENST00000588472 CYP2C18P33260 490 aa10.18□□□□□ -0.78
SDF2-207ENST00000588472 METAP2P50579 478 aaKnown RBP eCLIP10.18□□□□□ -0.78
SDF2-207ENST00000588472 EPHB4P54760 987 aa10.18□□□□□ -0.78
SDF2-207ENST00000588472 NAPAP54920 295 aa10.18□□□□□ -0.78
SDF2-207ENST00000588472 CCL23P55773 120 aa10.18□□□□□ -0.78
SDF2-207ENST00000588472 GHRHRQ02643 423 aa10.18□□□□□ -0.78
SDF2-207ENST00000588472 FPGSQ05932 587 aa10.18□□□□□ -0.78
SDF2-207ENST00000588472 NBPF20Q3BBV1 942 aa10.18□□□□□ -0.78
SDF2-207ENST00000588472 SYMPKQ92797 1274 aaKnown RBP10.18□□□□□ -0.78
SDF2-207ENST00000588472 CDX2Q99626 313 aaPredicted RBP10.18□□□□□ -0.78
SDF2-207ENST00000588472 USP26Q9BXU7 913 aa10.18□□□□□ -0.78
SDF2-207ENST00000588472 MLXIPQ9HAP2 919 aa10.18□□□□□ -0.78
SDF2-207ENST00000588472 TRMT13Q9NUP7 481 aaKnown RBP10.18□□□□□ -0.78
SDF2-207ENST00000588472 TBX21Q9UL17 535 aa10.18□□□□□ -0.78
SDF2-207ENST00000588472 CUL9Q8IWT3 2517 aa10.17□□□□□ -0.78
SDF2-207ENST00000588472 CNTNAP5Q8WYK1 1306 aa10.17□□□□□ -0.78
SDF2-207ENST00000588472 SPDYE3A6NKU9 549 aa10.17□□□□□ -0.78
SDF2-207ENST00000588472 RGS20O76081 388 aa10.17□□□□□ -0.78
SDF2-207ENST00000588472 GGPS1O95749 300 aa10.17□□□□□ -0.78
SDF2-207ENST00000588472 CD4P01730 458 aa10.17□□□□□ -0.78
SDF2-207ENST00000588472 MMP3P08254 477 aa10.17□□□□□ -0.78
SDF2-207ENST00000588472 ZNF286BP0CG31 522 aa10.17□□□□□ -0.78
SDF2-207ENST00000588472 ACRP10323 421 aa10.17□□□□□ -0.78
SDF2-207ENST00000588472 CYP2C9P11712 490 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms