RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 MFSD5Q6N075 450 aa22.56■■□□□ 1.2
TPM4-208ENST00000588410 GPR153Q6NV75 609 aa22.56■■□□□ 1.2
TPM4-208ENST00000588410 KCNV1Q6PIU1 500 aa22.56■■□□□ 1.2
TPM4-208ENST00000588410 APOA5Q6Q788 366 aa22.56■■□□□ 1.2
TPM4-208ENST00000588410 TMTC3Q6ZXV5 915 aa22.56■■□□□ 1.2
TPM4-208ENST00000588410 VSIG10LQ86VR7 867 aa22.56■■□□□ 1.2
TPM4-208ENST00000588410 TMEM199Q8N511 208 aa22.56■■□□□ 1.2
TPM4-208ENST00000588410 AFG1LQ8WV93 481 aa22.56■■□□□ 1.2
TPM4-208ENST00000588410 TRPV6Q9H1D0 765 aa22.56■■□□□ 1.2
TPM4-208ENST00000588410 RBM28Q9NW13 759 aaKnown RBP22.56■■□□□ 1.2
TPM4-208ENST00000588410 DDX41Q9UJV9 622 aaKnown RBP22.56■■□□□ 1.2
TPM4-208ENST00000588410 ZBTB43O43298 467 aa22.55■■□□□ 1.2
TPM4-208ENST00000588410 CHMP4BP1P59074 171 aa22.55■■□□□ 1.2
TPM4-208ENST00000588410 ARHGAP1Q07960 439 aa22.55■■□□□ 1.2
TPM4-208ENST00000588410 PPIGQ13427 754 aaKnown RBP eCLIP22.55■■□□□ 1.2
TPM4-208ENST00000588410 ERICH6BQ5W0A0 696 aa22.55■■□□□ 1.2
TPM4-208ENST00000588410 DHX37Q8IY37 1157 aaKnown RBP22.55■■□□□ 1.2
TPM4-208ENST00000588410 JAKMIP1Q96N16 626 aaKnown RBP22.55■■□□□ 1.2
TPM4-208ENST00000588410 ALDH8A1Q9H2A2 487 aaPredicted RBP22.55■■□□□ 1.2
TPM4-208ENST00000588410 NAP1L2Q9ULW6 460 aaPredicted RBP22.55■■□□□ 1.2
TPM4-208ENST00000588410 B4GALT4O60513 344 aa22.54■■□□□ 1.2
TPM4-208ENST00000588410 SUPT20HL2P0C7V6 817 aa22.54■■□□□ 1.2
TPM4-208ENST00000588410 CASTP20810 708 aaKnown RBP22.54■■□□□ 1.2
TPM4-208ENST00000588410 HSPA4P34932 840 aa22.54■■□□□ 1.2
TPM4-208ENST00000588410 LAMC2Q13753 1193 aa22.54■■□□□ 1.2
TPM4-208ENST00000588410 RTN1Q16799 776 aa22.54■■□□□ 1.2
TPM4-208ENST00000588410 NBPF20Q3BBV1 942 aa22.54■■□□□ 1.2
TPM4-208ENST00000588410 IL31RAQ8NI17 732 aa22.54■■□□□ 1.2
TPM4-208ENST00000588410 RNPC3Q96LT9 517 aaKnown RBP22.54■■□□□ 1.2
TPM4-208ENST00000588410 HIPK3Q9H422 1215 aa22.54■■□□□ 1.2
TPM4-208ENST00000588410 KLF18A0A0U1RQI7 1052 aa22.53■■□□□ 1.2
TPM4-208ENST00000588410 hCG_1642624A0A1W2PR95 340 aa22.53■■□□□ 1.2
TPM4-208ENST00000588410 MMP3P08254 477 aa22.53■■□□□ 1.2
TPM4-208ENST00000588410 EPHB4P54760 987 aa22.53■■□□□ 1.2
TPM4-208ENST00000588410 GNPTABQ3T906 1256 aa22.53■■□□□ 1.2
TPM4-208ENST00000588410 KCNB2Q92953 911 aa22.53■■□□□ 1.2
TPM4-208ENST00000588410 PSTPIP2Q9H939 334 aa22.53■■□□□ 1.2
TPM4-208ENST00000588410 BRPF3Q9ULD4 1205 aa22.53■■□□□ 1.2
TPM4-208ENST00000588410 SNX14Q9Y5W7 946 aa22.53■■□□□ 1.2
TPM4-208ENST00000588410 DNAH12Q6ZR08 3092 aa22.52■■□□□ 1.2
TPM4-208ENST00000588410 GOLGA8AA7E2F4 631 aa22.52■■□□□ 1.2
TPM4-208ENST00000588410 GOLGA8BA8MQT2 603 aa22.52■■□□□ 1.2
TPM4-208ENST00000588410 CYP2C18P33260 490 aa22.52■■□□□ 1.2
TPM4-208ENST00000588410 DGKDQ16760 1214 aa22.52■■□□□ 1.2
TPM4-208ENST00000588410 NFRKBQ6P4R8 1299 aa22.52■■□□□ 1.2
TPM4-208ENST00000588410 USP17L6PQ6QN14 398 aa22.52■■□□□ 1.2
TPM4-208ENST00000588410 BLOC1S2Q6QNY1 142 aa22.52■■□□□ 1.2
TPM4-208ENST00000588410 HEATR3Q7Z4Q2 680 aa22.52■■□□□ 1.2
TPM4-208ENST00000588410 EMID1Q96A84 441 aaPredicted RBP22.52■■□□□ 1.2
TPM4-208ENST00000588410 ZFP91Q96JP5 570 aaPredicted RBP22.52■■□□□ 1.2
TPM4-208ENST00000588410 PIK3CDO00329 1044 aa22.51■■□□□ 1.19
TPM4-208ENST00000588410 STAM2O75886 525 aa22.51■■□□□ 1.19
TPM4-208ENST00000588410 RGS20O76081 388 aa22.51■■□□□ 1.19
TPM4-208ENST00000588410 TGFB3P10600 412 aa22.51■■□□□ 1.19
TPM4-208ENST00000588410 CSF2RAP15509 400 aa22.51■■□□□ 1.19
TPM4-208ENST00000588410 PSMA5P28066 241 aa22.51■■□□□ 1.19
TPM4-208ENST00000588410 DEFB123Q8N688 67 aa22.51■■□□□ 1.19
TPM4-208ENST00000588410 TRMT13Q9NUP7 481 aaKnown RBP22.51■■□□□ 1.19
TPM4-208ENST00000588410 CPA1P15085 419 aa22.5■■□□□ 1.19
TPM4-208ENST00000588410 PTPN11Q06124 597 aaPredicted RBP22.5■■□□□ 1.19
TPM4-208ENST00000588410 Q6ZUG5 572 aa22.5■■□□□ 1.19
TPM4-208ENST00000588410 PPTC7Q8NI37 304 aa22.5■■□□□ 1.19
TPM4-208ENST00000588410 NOC4LQ9BVI4 516 aaKnown RBP22.5■■□□□ 1.19
TPM4-208ENST00000588410 NOD1Q9Y239 953 aa22.5■■□□□ 1.19
TPM4-208ENST00000588410 MEIS2O14770 477 aa22.49■■□□□ 1.19
TPM4-208ENST00000588410 SORBS3O60504 671 aa22.49■■□□□ 1.19
TPM4-208ENST00000588410 GGPS1O95749 300 aa22.49■■□□□ 1.19
TPM4-208ENST00000588410 RCAN1P53805 252 aa22.49■■□□□ 1.19
TPM4-208ENST00000588410 CELF3Q5SZQ8 465 aaKnown RBP22.49■■□□□ 1.19
TPM4-208ENST00000588410 XRRA1Q6P2D8 792 aa22.49■■□□□ 1.19
TPM4-208ENST00000588410 GPKOWQ92917 476 aaPredicted RBP eCLIP22.49■■□□□ 1.19
TPM4-208ENST00000588410 SPATA33Q96N06 139 aa22.49■■□□□ 1.19
TPM4-208ENST00000588410 MLXIPQ9HAP2 919 aa22.49■■□□□ 1.19
TPM4-208ENST00000588410 RTEL1Q9NZ71 1219 aa22.49■■□□□ 1.19
TPM4-208ENST00000588410 FRMPD4Q14CM0 1322 aa22.49■■□□□ 1.19
TPM4-208ENST00000588410 LTBP2Q14767 1821 aa22.48■■□□□ 1.19
TPM4-208ENST00000588410 CCDC196A0A1B0GTZ2 297 aa22.48■■□□□ 1.19
TPM4-208ENST00000588410 EPB41L2O43491 1005 aaKnown RBP22.48■■□□□ 1.19
TPM4-208ENST00000588410 CYP2C9P11712 490 aa22.48■■□□□ 1.19
TPM4-208ENST00000588410 UBA1P22314 1058 aaKnown RBP22.48■■□□□ 1.19
TPM4-208ENST00000588410 METAP2P50579 478 aaKnown RBP eCLIP22.48■■□□□ 1.19
TPM4-208ENST00000588410 CCL23P55773 120 aa22.48■■□□□ 1.19
TPM4-208ENST00000588410 MYSM1Q5VVJ2 828 aa22.48■■□□□ 1.19
TPM4-208ENST00000588410 PSRC1Q6PGN9 363 aaPredicted RBP22.48■■□□□ 1.19
TPM4-208ENST00000588410 PPP1R13LQ8WUF5 828 aa22.48■■□□□ 1.19
TPM4-208ENST00000588410 BRF1Q92994 677 aa22.48■■□□□ 1.19
TPM4-208ENST00000588410 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.48■■□□□ 1.192e-12■■□□□ 13.8
TPM4-208ENST00000588410 KATNAL1Q9BW62 490 aa22.48■■□□□ 1.19
TPM4-208ENST00000588410 V9GY48 417 aaPredicted RBP22.48■■□□□ 1.19
TPM4-208ENST00000588410 CNTNAP5Q8WYK1 1306 aa22.48■■□□□ 1.19
TPM4-208ENST00000588410 SPDYE3A6NKU9 549 aa22.47■■□□□ 1.19
TPM4-208ENST00000588410 ACRP10323 421 aa22.47■■□□□ 1.19
TPM4-208ENST00000588410 RPS6KB1P23443 525 aa22.47■■□□□ 1.19
TPM4-208ENST00000588410 NAPAP54920 295 aa22.47■■□□□ 1.19
TPM4-208ENST00000588410 MRPS9P82933 396 aaKnown RBP22.47■■□□□ 1.19
TPM4-208ENST00000588410 APOBRQ0VD83 1088 aa22.47■■□□□ 1.19
TPM4-208ENST00000588410 PCNX4Q63HM2 1172 aa22.47■■□□□ 1.19
TPM4-208ENST00000588410 Q7L0L9 218 aa22.47■■□□□ 1.19
TPM4-208ENST00000588410 NLRX1Q86UT6 975 aa22.47■■□□□ 1.19
TPM4-208ENST00000588410 INPP4AQ96PE3 977 aaPredicted RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms