RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 LRRC8AQ8IWT6 810 aa10.75□□□□□ -0.69
LINC01539-201ENST00000587904 CCAR2Q8N163 923 aaKnown RBP10.75□□□□□ -0.69
LINC01539-201ENST00000587904 TBCKQ8TEA7 893 aa10.75□□□□□ -0.69
LINC01539-201ENST00000587904 PAGE5Q96GU1 130 aa10.75□□□□□ -0.69
LINC01539-201ENST00000587904 CCSER1Q9C0I3 900 aa10.75□□□□□ -0.69
LINC01539-201ENST00000587904 SUDS3Q9H7L9 328 aaPredicted RBP10.75□□□□□ -0.69
LINC01539-201ENST00000587904 SPATS2LQ9NUQ6 558 aaKnown RBP10.75□□□□□ -0.69
LINC01539-201ENST00000587904 A0A087WWV3 80 aa10.74□□□□□ -0.69
LINC01539-201ENST00000587904 CLRN2A0PK11 232 aa10.74□□□□□ -0.69
LINC01539-201ENST00000587904 EFCAB8A8MWE9 144 aa10.74□□□□□ -0.69
LINC01539-201ENST00000587904 USP17L10C9JJH3 530 aa10.74□□□□□ -0.69
LINC01539-201ENST00000587904 F5H6K3 240 aa10.74□□□□□ -0.69
LINC01539-201ENST00000587904 CCNT1O60563 726 aaKnown RBP10.74□□□□□ -0.69
LINC01539-201ENST00000587904 SASH3O75995 380 aa10.74□□□□□ -0.69
LINC01539-201ENST00000587904 CLK2P49760 499 aaKnown RBP10.74□□□□□ -0.69
LINC01539-201ENST00000587904 ZNF280AP59817 542 aaPredicted RBP10.74□□□□□ -0.69
LINC01539-201ENST00000587904 KLRC3Q07444 240 aa10.74□□□□□ -0.69
LINC01539-201ENST00000587904 NCAPHQ15003 741 aa10.74□□□□□ -0.69
LINC01539-201ENST00000587904 PDCD2Q16342 344 aaPredicted RBP10.74□□□□□ -0.69
LINC01539-201ENST00000587904 IL17AQ16552 155 aa10.74□□□□□ -0.69
LINC01539-201ENST00000587904 LETM2Q2VYF4 491 aa10.74□□□□□ -0.69
LINC01539-201ENST00000587904 TTBK2Q6IQ55 1244 aa10.74□□□□□ -0.69
LINC01539-201ENST00000587904 PDXDC2PQ6P474 469 aa10.74□□□□□ -0.69
LINC01539-201ENST00000587904 BTNL9Q6UXG8 535 aa10.74□□□□□ -0.69
LINC01539-201ENST00000587904 SIAH1Q8IUQ4 282 aa10.74□□□□□ -0.69
LINC01539-201ENST00000587904 ARMC2Q8NEN0 867 aa10.74□□□□□ -0.69
LINC01539-201ENST00000587904 COA7Q96BR5 231 aa10.74□□□□□ -0.69
LINC01539-201ENST00000587904 SH2D4AQ9H788 454 aa10.74□□□□□ -0.69
LINC01539-201ENST00000587904 DISC1Q9NRI5 854 aa10.74□□□□□ -0.69
LINC01539-201ENST00000587904 ATF5Q9Y2D1 282 aaPredicted RBP10.74□□□□□ -0.69
LINC01539-201ENST00000587904 NFKBIEO00221 500 aa10.73□□□□□ -0.69
LINC01539-201ENST00000587904 FOXN1O15353 648 aa10.73□□□□□ -0.69
LINC01539-201ENST00000587904 PPP1R11O60927 126 aaPredicted RBP10.73□□□□□ -0.69
LINC01539-201ENST00000587904 NDUFB10O96000 172 aa10.73□□□□□ -0.69
LINC01539-201ENST00000587904 BMP3P12645 472 aa10.73□□□□□ -0.69
LINC01539-201ENST00000587904 NF2P35240 595 aa10.73□□□□□ -0.69
LINC01539-201ENST00000587904 DPYDQ12882 1025 aa10.73□□□□□ -0.69
LINC01539-201ENST00000587904 TNFAIP1Q13829 316 aa10.73□□□□□ -0.69
LINC01539-201ENST00000587904 QRICH1Q2TAL8 776 aa10.73□□□□□ -0.69
LINC01539-201ENST00000587904 SGIP1Q9BQI5 828 aa10.73□□□□□ -0.69
LINC01539-201ENST00000587904 TMEM60Q9H2L4 133 aa10.73□□□□□ -0.69
LINC01539-201ENST00000587904 GOPCQ9HD26 462 aa10.73□□□□□ -0.69
LINC01539-201ENST00000587904 ARFGAP3Q9NP61 516 aa10.73□□□□□ -0.69
LINC01539-201ENST00000587904 MYOZ2Q9NPC6 264 aa10.73□□□□□ -0.69
LINC01539-201ENST00000587904 RMND1Q9NWS8 449 aa10.73□□□□□ -0.69
LINC01539-201ENST00000587904 CPSF2Q9P2I0 782 aaKnown RBP10.73□□□□□ -0.69
LINC01539-201ENST00000587904 BIN2Q9UBW5 565 aaPredicted RBP10.73□□□□□ -0.69
LINC01539-201ENST00000587904 GTPBP6O43824 516 aaPredicted RBP10.73□□□□□ -0.69
LINC01539-201ENST00000587904 SLURP2P0DP57 97 aa10.73□□□□□ -0.69
LINC01539-201ENST00000587904 ERCC5P28715 1186 aaPredicted RBP10.73□□□□□ -0.69
LINC01539-201ENST00000587904 SLC16A2P36021 539 aa10.73□□□□□ -0.69
LINC01539-201ENST00000587904 UBA7P41226 1012 aa10.73□□□□□ -0.69
LINC01539-201ENST00000587904 STAT6P42226 847 aa10.73□□□□□ -0.69
LINC01539-201ENST00000587904 MAP3K10Q02779 954 aa10.73□□□□□ -0.69
LINC01539-201ENST00000587904 AP3B2Q13367 1082 aa10.73□□□□□ -0.69
LINC01539-201ENST00000587904 RBBP5Q15291 538 aaKnown RBP10.73□□□□□ -0.69
LINC01539-201ENST00000587904 CDC37Q16543 378 aaPredicted RBP10.73□□□□□ -0.69
LINC01539-201ENST00000587904 PREPLQ4J6C6 727 aaPredicted RBP10.73□□□□□ -0.69
LINC01539-201ENST00000587904 C1QTNF12Q5T7M4 302 aa10.73□□□□□ -0.69
LINC01539-201ENST00000587904 PPP4R3AQ6IN85 833 aa10.73□□□□□ -0.69
LINC01539-201ENST00000587904 KCNV1Q6PIU1 500 aa10.73□□□□□ -0.69
LINC01539-201ENST00000587904 ENOX1Q8TC92 643 aaKnown RBP10.73□□□□□ -0.69
LINC01539-201ENST00000587904 ZNF483Q8TF39 744 aaPredicted RBP10.73□□□□□ -0.69
LINC01539-201ENST00000587904 RAB34Q9BZG1 259 aa10.73□□□□□ -0.69
LINC01539-201ENST00000587904 PSTPIP2Q9H939 334 aa10.73□□□□□ -0.69
LINC01539-201ENST00000587904 GINM1Q9NU53 330 aa10.73□□□□□ -0.69
LINC01539-201ENST00000587904 ZBTB21Q9ULJ3 1066 aa10.73□□□□□ -0.69
LINC01539-201ENST00000587904 CBFA2T2O43439 604 aa10.72□□□□□ -0.69
LINC01539-201ENST00000587904 TADA3O75528 432 aa10.72□□□□□ -0.69
LINC01539-201ENST00000587904 ATXN8OSP0DMR3 200 aa10.72□□□□□ -0.69
LINC01539-201ENST00000587904 KCNJ6P48051 423 aa10.72□□□□□ -0.69
LINC01539-201ENST00000587904 TMEM266Q2M3C6 531 aa10.72□□□□□ -0.69
LINC01539-201ENST00000587904 SYDE2Q5VT97 1194 aa10.72□□□□□ -0.69
LINC01539-201ENST00000587904 LRRC31Q6UY01 552 aa10.72□□□□□ -0.69
LINC01539-201ENST00000587904 GPR161Q8N6U8 529 aaKnown RBP10.72□□□□□ -0.69
LINC01539-201ENST00000587904 KAT2BQ92831 832 aa10.72□□□□□ -0.69
LINC01539-201ENST00000587904 AMNQ9BXJ7 453 aa10.72□□□□□ -0.69
LINC01539-201ENST00000587904 FUT8Q9BYC5 575 aa10.72□□□□□ -0.69
LINC01539-201ENST00000587904 IRAK4Q9NWZ3 460 aa10.72□□□□□ -0.69
LINC01539-201ENST00000587904 IMPACTQ9P2X3 320 aa10.72□□□□□ -0.69
LINC01539-201ENST00000587904 NRBP1Q9UHY1 535 aa10.72□□□□□ -0.69
LINC01539-201ENST00000587904 TMX2Q9Y320 296 aa10.72□□□□□ -0.69
LINC01539-201ENST00000587904 USP27XA6NNY8 438 aa10.72□□□□□ -0.69
LINC01539-201ENST00000587904 WNT10BO00744 389 aa10.72□□□□□ -0.69
LINC01539-201ENST00000587904 MAP2K7O14733 419 aa10.72□□□□□ -0.69
LINC01539-201ENST00000587904 RAD21O60216 631 aa10.72□□□□□ -0.69
LINC01539-201ENST00000587904 RTN2O75298 545 aa10.72□□□□□ -0.69
LINC01539-201ENST00000587904 SETSIPP0DME0 302 aa10.72□□□□□ -0.69
LINC01539-201ENST00000587904 MYBL2P10244 700 aa10.72□□□□□ -0.69
LINC01539-201ENST00000587904 BMP6P22004 513 aa10.72□□□□□ -0.69
LINC01539-201ENST00000587904 PAX7P23759 505 aa10.72□□□□□ -0.69
LINC01539-201ENST00000587904 RDXP35241 583 aaKnown RBP10.72□□□□□ -0.69
LINC01539-201ENST00000587904 FXR2P51116 673 aaKnown RBP eCLIP10.72□□□□□ -0.69
LINC01539-201ENST00000587904 SHROOM1Q2M3G4 852 aaPredicted RBP10.72□□□□□ -0.69
LINC01539-201ENST00000587904 FOXR1Q6PIV2 292 aa10.72□□□□□ -0.69
LINC01539-201ENST00000587904 GRAMD1CQ8IYS0 662 aa10.72□□□□□ -0.69
LINC01539-201ENST00000587904 RASSF8Q8NHQ8 419 aa10.72□□□□□ -0.69
LINC01539-201ENST00000587904 DPF2Q92785 391 aa10.72□□□□□ -0.69
LINC01539-201ENST00000587904 SLC24A3Q9HC58 644 aa10.72□□□□□ -0.69
LINC01539-201ENST00000587904 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms