RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 EPHB4P54760 987 aa20.43■□□□□ 0.86
TPM4-206ENST00000587201 ARHGAP1Q07960 439 aa20.43■□□□□ 0.86
TPM4-206ENST00000587201 VSIG10LQ86VR7 867 aa20.43■□□□□ 0.86
TPM4-206ENST00000587201 CCDC82Q8N4S0 544 aa20.43■□□□□ 0.86
TPM4-206ENST00000587201 AFG1LQ8WV93 481 aa20.43■□□□□ 0.86
TPM4-206ENST00000587201 CUL5Q93034 780 aa20.43■□□□□ 0.86
TPM4-206ENST00000587201 TRPV6Q9H1D0 765 aa20.43■□□□□ 0.86
TPM4-206ENST00000587201 DDX41Q9UJV9 622 aaKnown RBP20.43■□□□□ 0.86
TPM4-206ENST00000587201 HMGB1P09429 215 aaKnown RBP20.42■□□□□ 0.86
TPM4-206ENST00000587201 FAM47CQ5HY64 1035 aa20.42■□□□□ 0.86
TPM4-206ENST00000587201 APOA5Q6Q788 366 aa20.42■□□□□ 0.86
TPM4-206ENST00000587201 TMTC3Q6ZXV5 915 aa20.42■□□□□ 0.86
TPM4-206ENST00000587201 TMEM199Q8N511 208 aa20.42■□□□□ 0.86
TPM4-206ENST00000587201 IL31RAQ8NI17 732 aa20.42■□□□□ 0.86
TPM4-206ENST00000587201 SMARCC2Q8TAQ2 1214 aa20.42■□□□□ 0.86
TPM4-206ENST00000587201 ALDH8A1Q9H2A2 487 aaPredicted RBP20.42■□□□□ 0.86
TPM4-206ENST00000587201 KIAA1217Q5T5P2 1943 aa20.41■□□□□ 0.86
TPM4-206ENST00000587201 hCG_1642624A0A1W2PR95 340 aa20.41■□□□□ 0.86
TPM4-206ENST00000587201 MMP3P08254 477 aa20.41■□□□□ 0.86
TPM4-206ENST00000587201 PPIGQ13427 754 aaKnown RBP eCLIP20.41■□□□□ 0.86
TPM4-206ENST00000587201 NBPF20Q3BBV1 942 aa20.41■□□□□ 0.86
TPM4-206ENST00000587201 KCNV1Q6PIU1 500 aa20.41■□□□□ 0.86
TPM4-206ENST00000587201 ZFP91Q96JP5 570 aaPredicted RBP20.41■□□□□ 0.86
TPM4-206ENST00000587201 RNPC3Q96LT9 517 aaKnown RBP20.41■□□□□ 0.86
TPM4-206ENST00000587201 HIPK3Q9H422 1215 aa20.41■□□□□ 0.86
TPM4-206ENST00000587201 RBM28Q9NW13 759 aaKnown RBP20.41■□□□□ 0.86
TPM4-206ENST00000587201 ZBTB43O43298 467 aa20.4■□□□□ 0.86
TPM4-206ENST00000587201 RGS20O76081 388 aa20.4■□□□□ 0.86
TPM4-206ENST00000587201 REC8O95072 547 aa20.4■□□□□ 0.86
TPM4-206ENST00000587201 SUPT20HL2P0C7V6 817 aa20.4■□□□□ 0.86
TPM4-206ENST00000587201 CSF2RAP15509 400 aa20.4■□□□□ 0.86
TPM4-206ENST00000587201 CASTP20810 708 aaKnown RBP20.4■□□□□ 0.86
TPM4-206ENST00000587201 CYP2C18P33260 490 aa20.4■□□□□ 0.86
TPM4-206ENST00000587201 HSPA4P34932 840 aa20.4■□□□□ 0.86
TPM4-206ENST00000587201 CHMP4BP1P59074 171 aa20.4■□□□□ 0.86
TPM4-206ENST00000587201 FGD1P98174 961 aa20.4■□□□□ 0.86
TPM4-206ENST00000587201 USP17L6PQ6QN14 398 aa20.4■□□□□ 0.86
TPM4-206ENST00000587201 DHX37Q8IY37 1157 aaKnown RBP20.4■□□□□ 0.86
TPM4-206ENST00000587201 DEFB123Q8N688 67 aa20.4■□□□□ 0.86
TPM4-206ENST00000587201 PPP1R13LQ8WUF5 828 aa20.4■□□□□ 0.86
TPM4-206ENST00000587201 KCNB2Q92953 911 aa20.4■□□□□ 0.86
TPM4-206ENST00000587201 TRMT13Q9NUP7 481 aaKnown RBP20.4■□□□□ 0.86
TPM4-206ENST00000587201 BRPF3Q9ULD4 1205 aa20.4■□□□□ 0.86
TPM4-206ENST00000587201 LAMC2Q13753 1193 aa20.39■□□□□ 0.85
TPM4-206ENST00000587201 NFRKBQ6P4R8 1299 aa20.39■□□□□ 0.85
TPM4-206ENST00000587201 Q7L0L9 218 aa20.39■□□□□ 0.85
TPM4-206ENST00000587201 EMID1Q96A84 441 aaPredicted RBP20.39■□□□□ 0.85
TPM4-206ENST00000587201 JAKMIP1Q96N16 626 aaKnown RBP20.39■□□□□ 0.85
TPM4-206ENST00000587201 PPP4R2Q9NY27 417 aa20.39■□□□□ 0.85
TPM4-206ENST00000587201 NAP1L2Q9ULW6 460 aaPredicted RBP20.39■□□□□ 0.85
TPM4-206ENST00000587201 SNX14Q9Y5W7 946 aa20.39■□□□□ 0.85
TPM4-206ENST00000587201 FRMPD4Q14CM0 1322 aa20.38■□□□□ 0.85
TPM4-206ENST00000587201 UMODL1Q5DID0 1318 aa20.38■□□□□ 0.85
TPM4-206ENST00000587201 KLF18A0A0U1RQI7 1052 aa20.38■□□□□ 0.85
TPM4-206ENST00000587201 GOLGA8AA7E2F4 631 aa20.38■□□□□ 0.85
TPM4-206ENST00000587201 GOLGA8BA8MQT2 603 aa20.38■□□□□ 0.85
TPM4-206ENST00000587201 MEIS2O14770 477 aa20.38■□□□□ 0.85
TPM4-206ENST00000587201 CPA1P15085 419 aa20.38■□□□□ 0.85
TPM4-206ENST00000587201 CCL23P55773 120 aa20.38■□□□□ 0.85
TPM4-206ENST00000587201 DGKDQ16760 1214 aa20.38■□□□□ 0.85
TPM4-206ENST00000587201 RTN1Q16799 776 aa20.38■□□□□ 0.85
TPM4-206ENST00000587201 GNPTABQ3T906 1256 aa20.38■□□□□ 0.85
TPM4-206ENST00000587201 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.38■□□□□ 0.852e-12■■□□□ 12.2
TPM4-206ENST00000587201 NOC4LQ9BVI4 516 aaKnown RBP20.38■□□□□ 0.85
TPM4-206ENST00000587201 PSTPIP2Q9H939 334 aa20.38■□□□□ 0.85
TPM4-206ENST00000587201 PIK3CDO00329 1044 aa20.37■□□□□ 0.85
TPM4-206ENST00000587201 SORBS3O60504 671 aa20.37■□□□□ 0.85
TPM4-206ENST00000587201 STAM2O75886 525 aa20.37■□□□□ 0.85
TPM4-206ENST00000587201 GGPS1O95749 300 aa20.37■□□□□ 0.85
TPM4-206ENST00000587201 TGFB3P10600 412 aa20.37■□□□□ 0.85
TPM4-206ENST00000587201 CYP2C9P11712 490 aa20.37■□□□□ 0.85
TPM4-206ENST00000587201 PTPN11Q06124 597 aaPredicted RBP20.37■□□□□ 0.85
TPM4-206ENST00000587201 BLOC1S2Q6QNY1 142 aa20.37■□□□□ 0.85
TPM4-206ENST00000587201 Q6ZUG5 572 aa20.37■□□□□ 0.85
TPM4-206ENST00000587201 HEATR3Q7Z4Q2 680 aa20.37■□□□□ 0.85
TPM4-206ENST00000587201 PPTC7Q8NI37 304 aa20.37■□□□□ 0.85
TPM4-206ENST00000587201 GPKOWQ92917 476 aaPredicted RBP eCLIP20.37■□□□□ 0.852e-8■■■■□ 20.3
TPM4-206ENST00000587201 RTEL1Q9NZ71 1219 aa20.37■□□□□ 0.85
TPM4-206ENST00000587201 SCN10AQ9Y5Y9 1956 aa20.37■□□□□ 0.85
TPM4-206ENST00000587201 CNTNAP5Q8WYK1 1306 aa20.36■□□□□ 0.85
TPM4-206ENST00000587201 ACRP10323 421 aa20.36■□□□□ 0.85
TPM4-206ENST00000587201 UBA1P22314 1058 aaKnown RBP20.36■□□□□ 0.85
TPM4-206ENST00000587201 MRPS9P82933 396 aaKnown RBP20.36■□□□□ 0.85
TPM4-206ENST00000587201 SP2Q02086 613 aa20.36■□□□□ 0.85
TPM4-206ENST00000587201 TMEM240Q5SV17 173 aa20.36■□□□□ 0.85
TPM4-206ENST00000587201 CELF3Q5SZQ8 465 aaKnown RBP20.36■□□□□ 0.85
TPM4-206ENST00000587201 MYSM1Q5VVJ2 828 aa20.36■□□□□ 0.85
TPM4-206ENST00000587201 ERICH6BQ5W0A0 696 aa20.36■□□□□ 0.85
TPM4-206ENST00000587201 PSRC1Q6PGN9 363 aaPredicted RBP20.36■□□□□ 0.85
TPM4-206ENST00000587201 C16orf59Q7L2K0 433 aa20.36■□□□□ 0.85
TPM4-206ENST00000587201 SPATA33Q96N06 139 aa20.36■□□□□ 0.85
TPM4-206ENST00000587201 MLXIPQ9HAP2 919 aa20.36■□□□□ 0.85
TPM4-206ENST00000587201 IL23AQ9NPF7 189 aa20.36■□□□□ 0.85
TPM4-206ENST00000587201 NOD1Q9Y239 953 aa20.36■□□□□ 0.85
TPM4-206ENST00000587201 SMAD3P84022 425 aaKnown RBP20.35■□□□□ 0.85
TPM4-206ENST00000587201 APOBRQ0VD83 1088 aa20.35■□□□□ 0.85
TPM4-206ENST00000587201 ZNF365Q70YC5 407 aa20.35■□□□□ 0.85
TPM4-206ENST00000587201 KAT2BQ92831 832 aa20.35■□□□□ 0.85
TPM4-206ENST00000587201 KATNAL1Q9BW62 490 aa20.35■□□□□ 0.85
TPM4-206ENST00000587201 WNT8AQ9H1J5 351 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms