RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 GTF2IRD1Q9UHL9 959 aa16.59■□□□□ 0.25
CXXC1-208ENST00000587170 A0A0D9SFI3 127 aa16.58■□□□□ 0.24
CXXC1-208ENST00000587170 NBNO60934 754 aa16.58■□□□□ 0.24
CXXC1-208ENST00000587170 EFCAB14O75071 495 aa16.58■□□□□ 0.24
CXXC1-208ENST00000587170 GJB5O95377 273 aa16.58■□□□□ 0.24
CXXC1-208ENST00000587170 GH1P01241 217 aa16.58■□□□□ 0.24
CXXC1-208ENST00000587170 ERVK-21P61565 698 aa16.58■□□□□ 0.24
CXXC1-208ENST00000587170 DEFB103AP81534 67 aa16.58■□□□□ 0.24
CXXC1-208ENST00000587170 MKRN4PQ13434 485 aaPredicted RBP16.58■□□□□ 0.24
CXXC1-208ENST00000587170 TMEM31Q5JXX7 168 aa16.58■□□□□ 0.24
CXXC1-208ENST00000587170 TRAF7Q6Q0C0 670 aa16.58■□□□□ 0.24
CXXC1-208ENST00000587170 GDPD5Q8WTR4 605 aa16.58■□□□□ 0.24
CXXC1-208ENST00000587170 TOMM22Q9NS69 142 aa16.58■□□□□ 0.24
CXXC1-208ENST00000587170 KIAA1671Q9BY89 1806 aa16.58■□□□□ 0.24
CXXC1-208ENST00000587170 MYO7AQ13402 2215 aa16.58■□□□□ 0.24
CXXC1-208ENST00000587170 BAZ2BQ9UIF8 2168 aaKnown RBP16.57■□□□□ 0.24
CXXC1-208ENST00000587170 ABCB11O95342 1321 aa16.57■□□□□ 0.24
CXXC1-208ENST00000587170 ABHD14A-ACY1A0A1B0GW23 586 aa16.57■□□□□ 0.24
CXXC1-208ENST00000587170 F2P00734 622 aa16.57■□□□□ 0.24
CXXC1-208ENST00000587170 HSPD1P10809 573 aaKnown RBP16.57■□□□□ 0.24
CXXC1-208ENST00000587170 CKBP12277 381 aa16.57■□□□□ 0.24
CXXC1-208ENST00000587170 HOXD8P13378 290 aaPredicted RBP16.57■□□□□ 0.24
CXXC1-208ENST00000587170 NT5C2P49902 561 aa16.57■□□□□ 0.24
CXXC1-208ENST00000587170 TCTN1Q2MV58 587 aa16.57■□□□□ 0.24
CXXC1-208ENST00000587170 TRIM71Q2Q1W2 868 aaKnown RBP16.57■□□□□ 0.24
CXXC1-208ENST00000587170 RRP12Q5JTH9 1297 aaKnown RBP16.57■□□□□ 0.24
CXXC1-208ENST00000587170 DIEXFQ68CQ4 756 aaKnown RBP16.57■□□□□ 0.24
CXXC1-208ENST00000587170 TBC1D10CQ8IV04 446 aa16.57■□□□□ 0.24
CXXC1-208ENST00000587170 FAM227BQ96M60 508 aa16.57■□□□□ 0.24
CXXC1-208ENST00000587170 IWS1Q96ST2 819 aa16.57■□□□□ 0.24
CXXC1-208ENST00000587170 COL20A1Q9P218 1284 aa16.57■□□□□ 0.24
CXXC1-208ENST00000587170 LOXHD1Q8IVV2 1947 aa16.57■□□□□ 0.24
CXXC1-208ENST00000587170 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.56■□□□□ 0.24
CXXC1-208ENST00000587170 LINC01553A4QN01 128 aa16.56■□□□□ 0.24
CXXC1-208ENST00000587170 PI4K2BG5E9Z4 385 aa16.56■□□□□ 0.24
CXXC1-208ENST00000587170 HAS3O00219 553 aa16.56■□□□□ 0.24
CXXC1-208ENST00000587170 LY6KQ17RY6 165 aa16.56■□□□□ 0.24
CXXC1-208ENST00000587170 USH1GQ495M9 461 aa16.56■□□□□ 0.24
CXXC1-208ENST00000587170 MCMDC2Q4G0Z9 681 aa16.56■□□□□ 0.24
CXXC1-208ENST00000587170 TMCO2Q7Z6W1 182 aaPredicted RBP16.56■□□□□ 0.24
CXXC1-208ENST00000587170 ZNF589Q86UQ0 364 aaPredicted RBP16.56■□□□□ 0.24
CXXC1-208ENST00000587170 SYTL5Q8TDW5 730 aaPredicted RBP16.56■□□□□ 0.24
CXXC1-208ENST00000587170 NSUN6Q8TEA1 469 aaKnown RBP16.56■□□□□ 0.24
CXXC1-208ENST00000587170 TGS1Q96RS0 853 aaKnown RBP16.56■□□□□ 0.24
CXXC1-208ENST00000587170 RAD9AQ99638 391 aa16.56■□□□□ 0.24
CXXC1-208ENST00000587170 SUGCTQ9HAC7 445 aa16.56■□□□□ 0.24
CXXC1-208ENST00000587170 NEDD4P46934 1319 aa16.55■□□□□ 0.24
CXXC1-208ENST00000587170 CCDC171Q6TFL3 1326 aa16.55■□□□□ 0.24
CXXC1-208ENST00000587170 CASTP20810 708 aaKnown RBP16.55■□□□□ 0.24
CXXC1-208ENST00000587170 GHRHRQ02643 423 aa16.55■□□□□ 0.24
CXXC1-208ENST00000587170 PTK7Q13308 1070 aa16.55■□□□□ 0.24
CXXC1-208ENST00000587170 MBTPS1Q14703 1052 aa16.55■□□□□ 0.24
CXXC1-208ENST00000587170 CDC37Q16543 378 aaPredicted RBP16.55■□□□□ 0.24
CXXC1-208ENST00000587170 DGKDQ16760 1214 aa16.55■□□□□ 0.24
CXXC1-208ENST00000587170 PPTC7Q8NI37 304 aa16.55■□□□□ 0.24
CXXC1-208ENST00000587170 KATNAL1Q9BW62 490 aa16.55■□□□□ 0.24
CXXC1-208ENST00000587170 UBE2ZQ9H832 354 aaPredicted RBP16.55■□□□□ 0.24
CXXC1-208ENST00000587170 CD320Q9NPF0 282 aa16.55■□□□□ 0.24
CXXC1-208ENST00000587170 DDX41Q9UJV9 622 aaKnown RBP16.55■□□□□ 0.24
CXXC1-208ENST00000587170 PDE1AP54750 535 aa16.54■□□□□ 0.24
CXXC1-208ENST00000587170 HAND2P61296 217 aa16.54■□□□□ 0.24
CXXC1-208ENST00000587170 STXBP2Q15833 593 aa16.54■□□□□ 0.24
CXXC1-208ENST00000587170 LEXMQ3ZCV2 418 aa16.54■□□□□ 0.24
CXXC1-208ENST00000587170 MFSD6Q6ZSS7 791 aa16.54■□□□□ 0.24
CXXC1-208ENST00000587170 DGKHQ86XP1 1220 aa16.54■□□□□ 0.24
CXXC1-208ENST00000587170 TAAR1Q96RJ0 339 aa16.54■□□□□ 0.24
CXXC1-208ENST00000587170 RMDN3Q96TC7 470 aa16.54■□□□□ 0.24
CXXC1-208ENST00000587170 ZBED2Q9BTP6 218 aa16.54■□□□□ 0.24
CXXC1-208ENST00000587170 CPVLQ9H3G5 476 aa16.54■□□□□ 0.24
CXXC1-208ENST00000587170 HDAC6Q9UBN7 1215 aa16.54■□□□□ 0.24
CXXC1-208ENST00000587170 GOLGA8HP0CJ92 632 aa16.53■□□□□ 0.24
CXXC1-208ENST00000587170 PSEN2P49810 448 aa16.53■□□□□ 0.24
CXXC1-208ENST00000587170 HTRA4P83105 476 aaPredicted RBP16.53■□□□□ 0.24
CXXC1-208ENST00000587170 SEPT14Q6ZU15 432 aa16.53■□□□□ 0.24
CXXC1-208ENST00000587170 MCF2L2Q86YR7 1114 aa16.53■□□□□ 0.24
CXXC1-208ENST00000587170 C7orf31Q8N865 590 aa16.53■□□□□ 0.24
CXXC1-208ENST00000587170 SP7Q8TDD2 431 aaPredicted RBP16.53■□□□□ 0.24
CXXC1-208ENST00000587170 TBC1D5Q92609 795 aa16.53■□□□□ 0.24
CXXC1-208ENST00000587170 ANKS1AQ92625 1134 aa16.53■□□□□ 0.24
CXXC1-208ENST00000587170 ESR2Q92731 530 aa16.53■□□□□ 0.24
CXXC1-208ENST00000587170 WNT8BQ93098 351 aa16.53■□□□□ 0.24
CXXC1-208ENST00000587170 RNF41Q9H4P4 317 aaPredicted RBP16.53■□□□□ 0.24
CXXC1-208ENST00000587170 EMSYQ7Z589 1322 aa16.52■□□□□ 0.24
CXXC1-208ENST00000587170 EIF3JO75822 258 aaKnown RBP16.52■□□□□ 0.24
CXXC1-208ENST00000587170 ZNF286BP0CG31 522 aa16.52■□□□□ 0.24
CXXC1-208ENST00000587170 HOXC8P31273 242 aa16.52■□□□□ 0.24
CXXC1-208ENST00000587170 CHMP4BP1P59074 171 aa16.52■□□□□ 0.24
CXXC1-208ENST00000587170 NMIQ13287 307 aaPredicted RBP16.52■□□□□ 0.24
CXXC1-208ENST00000587170 LAMC2Q13753 1193 aa16.52■□□□□ 0.24
CXXC1-208ENST00000587170 IKBKEQ14164 716 aa16.52■□□□□ 0.24
CXXC1-208ENST00000587170 MFSD10Q14728 455 aa16.52■□□□□ 0.24
CXXC1-208ENST00000587170 KIAA0753Q2KHM9 967 aa16.52■□□□□ 0.24
CXXC1-208ENST00000587170 ASPRV1Q53RT3 343 aa16.52■□□□□ 0.24
CXXC1-208ENST00000587170 FAM178BQ8IXR5 827 aa16.52■□□□□ 0.24
CXXC1-208ENST00000587170 ADGRF4Q8IZF3 695 aa16.52■□□□□ 0.24
CXXC1-208ENST00000587170 PNMA1Q8ND90 353 aa16.52■□□□□ 0.24
CXXC1-208ENST00000587170 PXMP2Q9NR77 195 aa16.52■□□□□ 0.24
CXXC1-208ENST00000587170 OPLAHO14841 1288 aa16.51■□□□□ 0.23
CXXC1-208ENST00000587170 LGR5O75473 907 aa16.51■□□□□ 0.23
CXXC1-208ENST00000587170 HSD17B4P51659 736 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms