RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 AK8Q96MA6 479 aa23.09■■□□□ 1.29
ATG4D-204ENST00000586417 PYM1Q9BRP8 204 aaKnown RBP23.09■■□□□ 1.29
ATG4D-204ENST00000586417 PAGR1Q9BTK6 254 aa23.09■■□□□ 1.29
ATG4D-204ENST00000586417 CCSER1Q9C0I3 900 aa23.09■■□□□ 1.29
ATG4D-204ENST00000586417 PNMA3Q9UL41 463 aa23.09■■□□□ 1.29
ATG4D-204ENST00000586417 CCPG1Q9ULG6 757 aa23.09■■□□□ 1.29
ATG4D-204ENST00000586417 CTDP1Q9Y5B0 961 aaPredicted RBP23.09■■□□□ 1.29
ATG4D-204ENST00000586417 CNMDO75829 334 aa23.08■■□□□ 1.29
ATG4D-204ENST00000586417 FDX1P10109 184 aa23.08■■□□□ 1.29
ATG4D-204ENST00000586417 GCFC2P16383 781 aaKnown RBP23.08■■□□□ 1.29
ATG4D-204ENST00000586417 TM4SF4P48230 202 aa23.08■■□□□ 1.29
ATG4D-204ENST00000586417 ZRSR1Q15695 479 aaKnown RBP23.08■■□□□ 1.29
ATG4D-204ENST00000586417 CALCRLQ16602 461 aa23.08■■□□□ 1.29
ATG4D-204ENST00000586417 TEX2Q8IWB9 1127 aa23.08■■□□□ 1.29
ATG4D-204ENST00000586417 IQUBQ8NA54 791 aa23.08■■□□□ 1.29
ATG4D-204ENST00000586417 TXLNAP40222 546 aa23.07■■□□□ 1.28
ATG4D-204ENST00000586417 USP11P51784 963 aa23.07■■□□□ 1.28
ATG4D-204ENST00000586417 SREBF2Q12772 1141 aa23.07■■□□□ 1.28
ATG4D-204ENST00000586417 PLS1Q14651 629 aa23.07■■□□□ 1.28
ATG4D-204ENST00000586417 KARSQ15046 597 aaKnown RBP23.07■■□□□ 1.28
ATG4D-204ENST00000586417 DHX40Q8IX18 779 aaKnown RBP23.07■■□□□ 1.28
ATG4D-204ENST00000586417 IGSF22Q8N9C0 903 aa23.07■■□□□ 1.28
ATG4D-204ENST00000586417 SMCR8Q8TEV9 937 aaPredicted RBP23.07■■□□□ 1.28
ATG4D-204ENST00000586417 FOSP01100 380 aaPredicted RBP23.06■■□□□ 1.28
ATG4D-204ENST00000586417 C1QTNF8P60827 252 aa23.06■■□□□ 1.28
ATG4D-204ENST00000586417 SNRNP48Q6IEG0 339 aaKnown RBP23.06■■□□□ 1.28
ATG4D-204ENST00000586417 MBOAT7Q96N66 472 aa23.06■■□□□ 1.28
ATG4D-204ENST00000586417 NAP1L4Q99733 375 aaKnown RBP23.06■■□□□ 1.28
ATG4D-204ENST00000586417 BPIFA3Q9BQP9 254 aa23.06■■□□□ 1.28
ATG4D-204ENST00000586417 DISC1Q9NRI5 854 aa23.06■■□□□ 1.28
ATG4D-204ENST00000586417 HOMER2Q9NSB8 354 aa23.06■■□□□ 1.28
ATG4D-204ENST00000586417 DDX25Q9UHL0 483 aaKnown RBP23.06■■□□□ 1.28
ATG4D-204ENST00000586417 CYP3A7-CYP3A51PA0A087WV96 503 aa23.06■■□□□ 1.28
ATG4D-204ENST00000586417 ALAS1P13196 640 aa23.06■■□□□ 1.28
ATG4D-204ENST00000586417 CYP3A7P24462 503 aa23.06■■□□□ 1.28
ATG4D-204ENST00000586417 FXR2P51116 673 aaKnown RBP eCLIP23.06■■□□□ 1.28
ATG4D-204ENST00000586417 Q3C1V9 767 aa23.06■■□□□ 1.28
ATG4D-204ENST00000586417 ISM2Q6H9L7 571 aa23.06■■□□□ 1.28
ATG4D-204ENST00000586417 NAT10Q9H0A0 1025 aaKnown RBP23.06■■□□□ 1.28
ATG4D-204ENST00000586417 R3HDMLQ9H3Y0 253 aa23.06■■□□□ 1.28
ATG4D-204ENST00000586417 MAN1B1Q9UKM7 699 aa23.06■■□□□ 1.28
ATG4D-204ENST00000586417 ABCB11O95342 1321 aa23.05■■□□□ 1.28
ATG4D-204ENST00000586417 ATP2A1O14983 1001 aa23.05■■□□□ 1.28
ATG4D-204ENST00000586417 BMP6P22004 513 aa23.05■■□□□ 1.28
ATG4D-204ENST00000586417 HOXA13P31271 388 aaPredicted RBP23.05■■□□□ 1.28
ATG4D-204ENST00000586417 SREBF1P36956 1147 aa23.05■■□□□ 1.28
ATG4D-204ENST00000586417 STAT3P40763 770 aa23.05■■□□□ 1.28
ATG4D-204ENST00000586417 UBA7P41226 1012 aa23.05■■□□□ 1.28
ATG4D-204ENST00000586417 TECP42680 631 aa23.05■■□□□ 1.28
ATG4D-204ENST00000586417 TXKP42681 527 aa23.05■■□□□ 1.28
ATG4D-204ENST00000586417 OAZ1P54368 228 aa23.05■■□□□ 1.28
ATG4D-204ENST00000586417 NAALADL2Q58DX5 795 aa23.05■■□□□ 1.28
ATG4D-204ENST00000586417 MUM1L1Q5H9M0 696 aa23.05■■□□□ 1.28
ATG4D-204ENST00000586417 MOXD1Q6UVY6 613 aa23.05■■□□□ 1.28
ATG4D-204ENST00000586417 MB21D1Q8N884 522 aa23.05■■□□□ 1.28
ATG4D-204ENST00000586417 TBC1D5Q92609 795 aa23.05■■□□□ 1.28
ATG4D-204ENST00000586417 HAS1Q92839 578 aa23.05■■□□□ 1.28
ATG4D-204ENST00000586417 CCDC34Q96HJ3 373 aa23.05■■□□□ 1.28
ATG4D-204ENST00000586417 PARK7Q99497 189 aaKnown RBP23.05■■□□□ 1.28
ATG4D-204ENST00000586417 MTRQ99707 1265 aa23.05■■□□□ 1.28
ATG4D-204ENST00000586417 ADCY5O95622 1261 aa23.04■■□□□ 1.28
ATG4D-204ENST00000586417 AFMP43652 599 aa23.04■■□□□ 1.28
ATG4D-204ENST00000586417 ARHGAP4P98171 946 aa23.04■■□□□ 1.28
ATG4D-204ENST00000586417 TAF1CQ15572 869 aaPredicted RBP23.04■■□□□ 1.28
ATG4D-204ENST00000586417 ANKRD13CQ8N6S4 541 aa23.04■■□□□ 1.28
ATG4D-204ENST00000586417 SMARCE1Q969G3 411 aa23.04■■□□□ 1.28
ATG4D-204ENST00000586417 TEX13BQ9BXU2 312 aa23.04■■□□□ 1.28
ATG4D-204ENST00000586417 MRPL11Q9Y3B7 192 aaKnown RBP23.04■■□□□ 1.28
ATG4D-204ENST00000586417 RABGAP1Q9Y3P9 1069 aa23.04■■□□□ 1.28
ATG4D-204ENST00000586417 SPDYE3A6NKU9 549 aa23.04■■□□□ 1.28
ATG4D-204ENST00000586417 HSPA6P17066 643 aa23.04■■□□□ 1.28
ATG4D-204ENST00000586417 DPYDQ12882 1025 aa23.04■■□□□ 1.28
ATG4D-204ENST00000586417 CLEC4DQ8WXI8 215 aa23.04■■□□□ 1.28
ATG4D-204ENST00000586417 MMTAG2Q9BU76 263 aaKnown RBP23.04■■□□□ 1.28
ATG4D-204ENST00000586417 SPATC1LQ9H0A9 340 aa23.04■■□□□ 1.28
ATG4D-204ENST00000586417 NFIBO00712 420 aa23.03■■□□□ 1.28
ATG4D-204ENST00000586417 MORC3Q14149 939 aa23.03■■□□□ 1.28
ATG4D-204ENST00000586417 CABP7Q86V35 215 aa23.03■■□□□ 1.28
ATG4D-204ENST00000586417 AOPEPQ8N6M6 819 aa23.03■■□□□ 1.28
ATG4D-204ENST00000586417 LRRC15Q8TF66 581 aa23.03■■□□□ 1.28
ATG4D-204ENST00000586417 TRERF1Q96PN7 1200 aa23.03■■□□□ 1.28
ATG4D-204ENST00000586417 ZCCHC17Q9NP64 241 aaKnown RBP23.03■■□□□ 1.28
ATG4D-204ENST00000586417 CASP1P29466 404 aa23.02■■□□□ 1.28
ATG4D-204ENST00000586417 STAT6P42226 847 aa23.02■■□□□ 1.28
ATG4D-204ENST00000586417 TRIML1Q8N9V2 468 aa23.02■■□□□ 1.28
ATG4D-204ENST00000586417 MOV10L1Q9BXT6 1211 aaKnown RBP23.02■■□□□ 1.28
ATG4D-204ENST00000586417 KCNMB3Q9NPA1 279 aa23.02■■□□□ 1.28
ATG4D-204ENST00000586417 ADGRA2Q96PE1 1338 aa23.02■■□□□ 1.28
ATG4D-204ENST00000586417 SMC2O95347 1197 aa23.01■■□□□ 1.27
ATG4D-204ENST00000586417 CFBP00751 764 aa23.01■■□□□ 1.27
ATG4D-204ENST00000586417 ERVK-9P63128 1117 aa23.01■■□□□ 1.27
ATG4D-204ENST00000586417 ERVK-24P63145 666 aa23.01■■□□□ 1.27
ATG4D-204ENST00000586417 PDIA5Q14554 519 aa23.01■■□□□ 1.27
ATG4D-204ENST00000586417 RRAGBQ5VZM2 374 aa23.01■■□□□ 1.27
ATG4D-204ENST00000586417 RNF146Q9NTX7 359 aa23.01■■□□□ 1.27
ATG4D-204ENST00000586417 CCDC39Q9UFE4 941 aa23.01■■□□□ 1.27
ATG4D-204ENST00000586417 CPA4Q9UI42 421 aa23.01■■□□□ 1.27
ATG4D-204ENST00000586417 GCOM1H8Y6P7 765 aaPredicted RBP23.01■■□□□ 1.27
ATG4D-204ENST00000586417 POLR2MP0CAP2 368 aa23.01■■□□□ 1.27
ATG4D-204ENST00000586417 CIITAP33076 1130 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms