RNA–Protein interactions for RNA: ENST00000586270.5

H3F3B-202, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 468 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-202ENST00000586270 Q6ZUG5 572 aa28.41■■■□□ 2.14
H3F3B-202ENST00000586270 BADQ92934 168 aa28.41■■■□□ 2.14
H3F3B-202ENST00000586270 TRIM43Q96BQ3 446 aaPredicted RBP28.41■■■□□ 2.14
H3F3B-202ENST00000586270 MTG1Q9BT17 334 aaPredicted RBP28.41■■■□□ 2.14
H3F3B-202ENST00000586270 PCDH10Q9P2E7 1040 aa28.41■■■□□ 2.14
H3F3B-202ENST00000586270 DNAH12Q6ZR08 3092 aa28.4■■■□□ 2.14
H3F3B-202ENST00000586270 CCDC196A0A1B0GTZ2 297 aa28.4■■■□□ 2.14
H3F3B-202ENST00000586270 ARIH2O95376 493 aa28.4■■■□□ 2.14
H3F3B-202ENST00000586270 CPA1P15085 419 aa28.4■■■□□ 2.14
H3F3B-202ENST00000586270 LY6KQ17RY6 165 aa28.4■■■□□ 2.14
H3F3B-202ENST00000586270 CCDC62Q6P9F0 684 aa28.4■■■□□ 2.14
H3F3B-202ENST00000586270 HEATR3Q7Z4Q2 680 aa28.4■■■□□ 2.14
H3F3B-202ENST00000586270 RPS6KB1P23443 525 aa28.39■■■□□ 2.14
H3F3B-202ENST00000586270 METAP2P50579 478 aaKnown RBP eCLIP28.39■■■□□ 2.14
H3F3B-202ENST00000586270 VSIG10LQ86VR7 867 aa28.39■■■□□ 2.14
H3F3B-202ENST00000586270 BRF1Q92994 677 aa28.39■■■□□ 2.14
H3F3B-202ENST00000586270 PSTPIP2Q9H939 334 aa28.39■■■□□ 2.14
H3F3B-202ENST00000586270 CNTNAP5Q8WYK1 1306 aa28.39■■■□□ 2.13
H3F3B-202ENST00000586270 hCG_1642624A0A1W2PR95 340 aa28.38■■■□□ 2.13
H3F3B-202ENST00000586270 A6NJR5 290 aa28.38■■■□□ 2.13
H3F3B-202ENST00000586270 PIK3CDO00329 1044 aa28.38■■■□□ 2.13
H3F3B-202ENST00000586270 PSMC6P62333 389 aa28.38■■■□□ 2.13
H3F3B-202ENST00000586270 PURAQ00577 322 aaKnown RBP28.38■■■□□ 2.13
H3F3B-202ENST00000586270 GNPTABQ3T906 1256 aa28.38■■■□□ 2.13
H3F3B-202ENST00000586270 FAM126BQ8IXS8 530 aa28.38■■■□□ 2.13
H3F3B-202ENST00000586270 STAM2O75886 525 aa28.37■■■□□ 2.13
H3F3B-202ENST00000586270 APOBRQ0VD83 1088 aa28.37■■■□□ 2.13
H3F3B-202ENST00000586270 DDX41Q9UJV9 622 aaKnown RBP28.37■■■□□ 2.13
H3F3B-202ENST00000586270 USP17L6PQ6QN14 398 aa28.36■■■□□ 2.13
H3F3B-202ENST00000586270 DHX37Q8IY37 1157 aaKnown RBP28.36■■■□□ 2.13
H3F3B-202ENST00000586270 SLC43A3Q8NBI5 491 aa28.36■■■□□ 2.13
H3F3B-202ENST00000586270 IL31RAQ8NI17 732 aa28.36■■■□□ 2.13
H3F3B-202ENST00000586270 AFG1LQ8WV93 481 aa28.36■■■□□ 2.13
H3F3B-202ENST00000586270 USP26Q9BXU7 913 aa28.36■■■□□ 2.13
H3F3B-202ENST00000586270 SCN10AQ9Y5Y9 1956 aa28.36■■■□□ 2.13
H3F3B-202ENST00000586270 SPDYE3A6NKU9 549 aa28.35■■■□□ 2.13
H3F3B-202ENST00000586270 hCG_1984214I3L0E3 225 aa28.35■■■□□ 2.13
H3F3B-202ENST00000586270 EIF5BO60841 1220 aaKnown RBP28.35■■■□□ 2.13
H3F3B-202ENST00000586270 ARHGAP1Q07960 439 aa28.35■■■□□ 2.13
H3F3B-202ENST00000586270 LAMC2Q13753 1193 aa28.35■■■□□ 2.13
H3F3B-202ENST00000586270 FAM47CQ5HY64 1035 aa28.35■■■□□ 2.13
H3F3B-202ENST00000586270 ZNF713Q8N859 430 aaPredicted RBP28.35■■■□□ 2.13
H3F3B-202ENST00000586270 GPKOWQ92917 476 aaPredicted RBP eCLIP28.35■■■□□ 2.135e-14■□□□□ 8.4
H3F3B-202ENST00000586270 EHMT1Q9H9B1 1298 aa28.35■■■□□ 2.13
H3F3B-202ENST00000586270 TBX21Q9UL17 535 aa28.35■■■□□ 2.13
H3F3B-202ENST00000586270 CYP46A1Q9Y6A2 500 aa28.35■■■□□ 2.13
H3F3B-202ENST00000586270 FRMPD4Q14CM0 1322 aa28.35■■■□□ 2.13
H3F3B-202ENST00000586270 TIMP1P01033 207 aa28.34■■■□□ 2.13
H3F3B-202ENST00000586270 MMP3P08254 477 aa28.34■■■□□ 2.13
H3F3B-202ENST00000586270 TGFB3P10600 412 aa28.34■■■□□ 2.13
H3F3B-202ENST00000586270 NAPAP54920 295 aa28.34■■■□□ 2.13
H3F3B-202ENST00000586270 FPGSQ05932 587 aa28.34■■■□□ 2.13
H3F3B-202ENST00000586270 DGKDQ16760 1214 aa28.34■■■□□ 2.13
H3F3B-202ENST00000586270 RUFY3Q7L099 469 aa28.34■■■□□ 2.13
H3F3B-202ENST00000586270 FBXL16Q8N461 479 aa28.34■■■□□ 2.13
H3F3B-202ENST00000586270 V9GY48 417 aaPredicted RBP28.34■■■□□ 2.13
H3F3B-202ENST00000586270 MEIS2O14770 477 aa28.33■■■□□ 2.13
H3F3B-202ENST00000586270 CHMP4BP1P59074 171 aa28.33■■■□□ 2.13
H3F3B-202ENST00000586270 PPP1R18Q6NYC8 613 aa28.33■■■□□ 2.13
H3F3B-202ENST00000586270 XRRA1Q6P2D8 792 aa28.33■■■□□ 2.13
H3F3B-202ENST00000586270 EMID1Q96A84 441 aaPredicted RBP28.33■■■□□ 2.13
H3F3B-202ENST00000586270 CD4P01730 458 aa28.32■■■□□ 2.12
H3F3B-202ENST00000586270 SUPT20HL2P0C7V6 817 aa28.32■■■□□ 2.12
H3F3B-202ENST00000586270 CDC27P30260 824 aa28.32■■■□□ 2.12
H3F3B-202ENST00000586270 LRIT3Q3SXY7 679 aa28.32■■■□□ 2.12
H3F3B-202ENST00000586270 WWC2Q6AWC2 1192 aa28.32■■■□□ 2.12
H3F3B-202ENST00000586270 ZFP91Q96JP5 570 aaPredicted RBP28.32■■■□□ 2.12
H3F3B-202ENST00000586270 PPP1R12CQ9BZL4 782 aa28.32■■■□□ 2.12
H3F3B-202ENST00000586270 GRIN2DO15399 1336 aa28.32■■■□□ 2.12
H3F3B-202ENST00000586270 RGS20O76081 388 aa28.31■■■□□ 2.12
H3F3B-202ENST00000586270 ITGB8P26012 769 aa28.31■■■□□ 2.12
H3F3B-202ENST00000586270 AKAP17AQ02040 695 aaKnown RBP28.31■■■□□ 2.12
H3F3B-202ENST00000586270 PCNX4Q63HM2 1172 aa28.31■■■□□ 2.12
H3F3B-202ENST00000586270 NFRKBQ6P4R8 1299 aa28.31■■■□□ 2.12
H3F3B-202ENST00000586270 NLRX1Q86UT6 975 aa28.31■■■□□ 2.12
H3F3B-202ENST00000586270 TMEM199Q8N511 208 aa28.31■■■□□ 2.12
H3F3B-202ENST00000586270 PPTC7Q8NI37 304 aa28.31■■■□□ 2.12
H3F3B-202ENST00000586270 ALDH8A1Q9H2A2 487 aaPredicted RBP28.31■■■□□ 2.12
H3F3B-202ENST00000586270 MLXIPQ9HAP2 919 aa28.31■■■□□ 2.12
H3F3B-202ENST00000586270 ZSWIM6Q9HCJ5 1215 aa28.31■■■□□ 2.12
H3F3B-202ENST00000586270 RANBP2P49792 3224 aaKnown RBP28.3■■■□□ 2.12
H3F3B-202ENST00000586270 B4GALT4O60513 344 aa28.3■■■□□ 2.12
H3F3B-202ENST00000586270 GGPS1O95749 300 aa28.3■■■□□ 2.12
H3F3B-202ENST00000586270 PPIGQ13427 754 aaKnown RBP eCLIP28.3■■■□□ 2.122e-17■□□□□ 8.1
H3F3B-202ENST00000586270 UBE2SQ16763 222 aa28.3■■■□□ 2.12
H3F3B-202ENST00000586270 NBPF20Q3BBV1 942 aa28.3■■■□□ 2.12
H3F3B-202ENST00000586270 CELF3Q5SZQ8 465 aaKnown RBP28.3■■■□□ 2.12
H3F3B-202ENST00000586270 MFSD5Q6N075 450 aa28.3■■■□□ 2.12
H3F3B-202ENST00000586270 TEX2Q8IWB9 1127 aa28.3■■■□□ 2.12
H3F3B-202ENST00000586270 SPATA33Q96N06 139 aa28.3■■■□□ 2.12
H3F3B-202ENST00000586270 KATNAL1Q9BW62 490 aa28.3■■■□□ 2.12
H3F3B-202ENST00000586270 AGXT2Q9BYV1 514 aa28.3■■■□□ 2.12
H3F3B-202ENST00000586270 TM6SF1Q9BZW5 370 aa28.3■■■□□ 2.12
H3F3B-202ENST00000586270 GLT8D2Q9H1C3 349 aa28.3■■■□□ 2.12
H3F3B-202ENST00000586270 HIPK3Q9H422 1215 aa28.3■■■□□ 2.12
H3F3B-202ENST00000586270 RTEL1Q9NZ71 1219 aa28.3■■■□□ 2.12
H3F3B-202ENST00000586270 NID2Q14112 1375 aa28.29■■■□□ 2.12
H3F3B-202ENST00000586270 FIBPO43427 364 aa28.29■■■□□ 2.12
H3F3B-202ENST00000586270 UBA1P22314 1058 aaKnown RBP28.29■■■□□ 2.12
H3F3B-202ENST00000586270 ADD1P35611 737 aaKnown RBP28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms