RNA–Protein interactions for RNA: ENST00000585098.5

NDEL1-219, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3 BASIC

Gene NDEL1, Length 454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-219ENST00000585098 NAPAP54920 295 aa27.23■■□□□ 1.95
NDEL1-219ENST00000585098 CCT2P78371 535 aaKnown RBP27.23■■□□□ 1.95
NDEL1-219ENST00000585098 LARP6Q9BRS8 491 aaKnown RBP27.23■■□□□ 1.95
NDEL1-219ENST00000585098 MRVI1Q9Y6F6 885 aa27.23■■□□□ 1.95
NDEL1-219ENST00000585098 PQBP1O60828 265 aaKnown RBP27.22■■□□□ 1.95
NDEL1-219ENST00000585098 CABYRO75952 493 aa27.22■■□□□ 1.95
NDEL1-219ENST00000585098 RGS20O76081 388 aa27.22■■□□□ 1.95
NDEL1-219ENST00000585098 UBE2SQ16763 222 aa27.22■■□□□ 1.95
NDEL1-219ENST00000585098 TYW1BQ6NUM6 668 aa27.22■■□□□ 1.95
NDEL1-219ENST00000585098 PRDM5Q9NQX1 630 aaPredicted RBP27.22■■□□□ 1.95
NDEL1-219ENST00000585098 PRKAG2Q9UGJ0 569 aa27.22■■□□□ 1.95
NDEL1-219ENST00000585098 DDX41Q9UJV9 622 aaKnown RBP27.22■■□□□ 1.95
NDEL1-219ENST00000585098 A0A0U1RQG5 324 aaPredicted RBP27.21■■□□□ 1.95
NDEL1-219ENST00000585098 STXBP3O00186 592 aa27.21■■□□□ 1.95
NDEL1-219ENST00000585098 GH1P01241 217 aa27.21■■□□□ 1.95
NDEL1-219ENST00000585098 PPP1R18Q6NYC8 613 aa27.21■■□□□ 1.95
NDEL1-219ENST00000585098 NCOA5Q9HCD5 579 aaKnown RBP27.21■■□□□ 1.95
NDEL1-219ENST00000585098 BARHL2Q9NY43 387 aa27.21■■□□□ 1.95
NDEL1-219ENST00000585098 hCG_1984214I3L0E3 225 aa27.2■■□□□ 1.94
NDEL1-219ENST00000585098 MYL3P08590 195 aa27.2■■□□□ 1.94
NDEL1-219ENST00000585098 PFKFB3Q16875 520 aaPredicted RBP27.2■■□□□ 1.94
NDEL1-219ENST00000585098 BRDTQ58F21 947 aaPredicted RBP27.2■■□□□ 1.94
NDEL1-219ENST00000585098 ANKRD33Q7Z3H0 272 aa27.2■■□□□ 1.94
NDEL1-219ENST00000585098 ZNF713Q8N859 430 aaPredicted RBP27.2■■□□□ 1.94
NDEL1-219ENST00000585098 PHKBQ93100 1093 aa27.2■■□□□ 1.94
NDEL1-219ENST00000585098 PDLIM7Q9NR12 457 aa27.2■■□□□ 1.94
NDEL1-219ENST00000585098 POLR3EQ9NVU0 708 aa27.2■■□□□ 1.94
NDEL1-219ENST00000585098 RBM27Q9P2N5 1060 aaKnown RBP27.2■■□□□ 1.94
NDEL1-219ENST00000585098 A6NJR5 290 aa27.19■■□□□ 1.94
NDEL1-219ENST00000585098 ARVCFO00192 962 aa27.19■■□□□ 1.94
NDEL1-219ENST00000585098 MAGEA10P43363 369 aaPredicted RBP27.19■■□□□ 1.94
NDEL1-219ENST00000585098 CDK7P50613 346 aa27.19■■□□□ 1.94
NDEL1-219ENST00000585098 MRPS9P82933 396 aaKnown RBP27.19■■□□□ 1.94
NDEL1-219ENST00000585098 ARHGAP1Q07960 439 aa27.19■■□□□ 1.94
NDEL1-219ENST00000585098 NTRK3Q16288 839 aa27.19■■□□□ 1.94
NDEL1-219ENST00000585098 ZNF274Q96GC6 653 aaPredicted RBP27.19■■□□□ 1.94
NDEL1-219ENST00000585098 TOX2Q96NM4 488 aa27.19■■□□□ 1.94
NDEL1-219ENST00000585098 GDF15Q99988 308 aa27.19■■□□□ 1.94
NDEL1-219ENST00000585098 PRO3102Q9H379 93 aa27.19■■□□□ 1.94
NDEL1-219ENST00000585098 DCDC2CA8MYV0 355 aa27.18■■□□□ 1.94
NDEL1-219ENST00000585098 PRPF3O43395 683 aaKnown RBP27.18■■□□□ 1.94
NDEL1-219ENST00000585098 PPFIA3O75145 1194 aa27.18■■□□□ 1.94
NDEL1-219ENST00000585098 CLTBP09497 229 aa27.18■■□□□ 1.94
NDEL1-219ENST00000585098 SCG2P13521 617 aa27.18■■□□□ 1.94
NDEL1-219ENST00000585098 PSMC6P62333 389 aa27.18■■□□□ 1.94
NDEL1-219ENST00000585098 PURAQ00577 322 aaKnown RBP27.18■■□□□ 1.94
NDEL1-219ENST00000585098 AKAP17AQ02040 695 aaKnown RBP27.18■■□□□ 1.94
NDEL1-219ENST00000585098 KCNV1Q6PIU1 500 aa27.18■■□□□ 1.94
NDEL1-219ENST00000585098 SH3RF1Q7Z6J0 888 aa27.18■■□□□ 1.94
NDEL1-219ENST00000585098 AFG1LQ8WV93 481 aa27.18■■□□□ 1.94
NDEL1-219ENST00000585098 RIC8AQ9NPQ8 531 aa27.18■■□□□ 1.94
NDEL1-219ENST00000585098 RTEL1Q9NZ71 1219 aa27.18■■□□□ 1.94
NDEL1-219ENST00000585098 MROH7Q68CQ1 1323 aa27.17■■□□□ 1.94
NDEL1-219ENST00000585098 SMCO2A6NFE2 343 aa27.17■■□□□ 1.94
NDEL1-219ENST00000585098 SPDYE3A6NKU9 549 aa27.17■■□□□ 1.94
NDEL1-219ENST00000585098 STAM2O75886 525 aa27.17■■□□□ 1.94
NDEL1-219ENST00000585098 IFNAR1P17181 557 aa27.17■■□□□ 1.94
NDEL1-219ENST00000585098 ADCY7P51828 1080 aa27.17■■□□□ 1.94
NDEL1-219ENST00000585098 MDM2Q00987 491 aaPredicted RBP27.17■■□□□ 1.94
NDEL1-219ENST00000585098 STK3Q13188 491 aa27.17■■□□□ 1.94
NDEL1-219ENST00000585098 ITGA7Q13683 1181 aa27.17■■□□□ 1.94
NDEL1-219ENST00000585098 C8orf34Q49A92 452 aa27.17■■□□□ 1.94
NDEL1-219ENST00000585098 HABP4Q5JVS0 413 aaKnown RBP27.17■■□□□ 1.94
NDEL1-219ENST00000585098 PCNX4Q63HM2 1172 aa27.17■■□□□ 1.94
NDEL1-219ENST00000585098 IL17RAQ96F46 866 aa27.17■■□□□ 1.94
NDEL1-219ENST00000585098 LBHD1Q9BQE6 289 aaPredicted RBP27.17■■□□□ 1.94
NDEL1-219ENST00000585098 PCDHA6Q9UN73 950 aa27.17■■□□□ 1.94
NDEL1-219ENST00000585098 PCDHA8Q9Y5H6 950 aa27.17■■□□□ 1.94
NDEL1-219ENST00000585098 GRIN2DO15399 1336 aa27.16■■□□□ 1.94
NDEL1-219ENST00000585098 KIAA1217Q5T5P2 1943 aa27.16■■□□□ 1.94
NDEL1-219ENST00000585098 TRIM43BA6NCK2 446 aa27.16■■□□□ 1.94
NDEL1-219ENST00000585098 KPNA6O60684 536 aa27.16■■□□□ 1.94
NDEL1-219ENST00000585098 FAAP100Q0VG06 881 aa27.16■■□□□ 1.94
NDEL1-219ENST00000585098 PKN1Q16512 942 aa27.16■■□□□ 1.94
NDEL1-219ENST00000585098 GNPTABQ3T906 1256 aa27.16■■□□□ 1.94
NDEL1-219ENST00000585098 XRRA1Q6P2D8 792 aa27.16■■□□□ 1.94
NDEL1-219ENST00000585098 DHX37Q8IY37 1157 aaKnown RBP27.16■■□□□ 1.94
NDEL1-219ENST00000585098 TRIM43Q96BQ3 446 aaPredicted RBP27.16■■□□□ 1.94
NDEL1-219ENST00000585098 INPP4AQ96PE3 977 aaPredicted RBP27.16■■□□□ 1.94
NDEL1-219ENST00000585098 MTG1Q9BT17 334 aaPredicted RBP27.16■■□□□ 1.94
NDEL1-219ENST00000585098 SLC26A6Q9BXS9 759 aa27.16■■□□□ 1.94
NDEL1-219ENST00000585098 RNF26Q9BY78 433 aaPredicted RBP27.16■■□□□ 1.94
NDEL1-219ENST00000585098 MMP3P08254 477 aa27.15■■□□□ 1.94
NDEL1-219ENST00000585098 TGFB3P10600 412 aa27.15■■□□□ 1.94
NDEL1-219ENST00000585098 LAMC2Q13753 1193 aa27.15■■□□□ 1.94
NDEL1-219ENST00000585098 SLC43A3Q8NBI5 491 aa27.15■■□□□ 1.94
NDEL1-219ENST00000585098 EMID1Q96A84 441 aaPredicted RBP27.15■■□□□ 1.94
NDEL1-219ENST00000585098 ALDH8A1Q9H2A2 487 aaPredicted RBP27.15■■□□□ 1.94
NDEL1-219ENST00000585098 TMEM39AQ9NV64 488 aa27.15■■□□□ 1.94
NDEL1-219ENST00000585098 SORBS3O60504 671 aa27.14■■□□□ 1.94
NDEL1-219ENST00000585098 SP2Q02086 613 aa27.14■■□□□ 1.94
NDEL1-219ENST00000585098 TEX2Q8IWB9 1127 aa27.14■■□□□ 1.94
NDEL1-219ENST00000585098 FAM126BQ8IXS8 530 aa27.14■■□□□ 1.94
NDEL1-219ENST00000585098 SPATA31C2B4DYI2 1134 aa27.13■■□□□ 1.93
NDEL1-219ENST00000585098 CPLX1O14810 134 aa27.13■■□□□ 1.93
NDEL1-219ENST00000585098 GGPS1O95749 300 aa27.13■■□□□ 1.93
NDEL1-219ENST00000585098 UBA1P22314 1058 aaKnown RBP27.13■■□□□ 1.93
NDEL1-219ENST00000585098 ICAM3P32942 547 aa27.13■■□□□ 1.93
NDEL1-219ENST00000585098 BMP8BP34820 402 aa27.13■■□□□ 1.93
NDEL1-219ENST00000585098 CELF3Q5SZQ8 465 aaKnown RBP27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms