RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 DDX19BQ9UMR2 479 aa21.37■■□□□ 1.01
TOP3A-220ENST00000585031 TSPY2A6NKD2 308 aa21.36■■□□□ 1.01
TOP3A-220ENST00000585031 ZFYP08048 801 aaPredicted RBP21.36■■□□□ 1.01
TOP3A-220ENST00000585031 ZP2Q05996 745 aa21.36■■□□□ 1.01
TOP3A-220ENST00000585031 TRIM71Q2Q1W2 868 aaKnown RBP21.36■■□□□ 1.01
TOP3A-220ENST00000585031 DCAF4Q8WV16 495 aa21.36■■□□□ 1.01
TOP3A-220ENST00000585031 PHOX2BQ99453 314 aa21.36■■□□□ 1.01
TOP3A-220ENST00000585031 PRKAG3Q9UGI9 489 aa21.36■■□□□ 1.01
TOP3A-220ENST00000585031 RAD50Q92878 1312 aa21.35■■□□□ 1.01
TOP3A-220ENST00000585031 NLRC5Q86WI3 1866 aa21.35■■□□□ 1.01
TOP3A-220ENST00000585031 ABHD14A-ACY1A0A1B0GW23 586 aa21.35■■□□□ 1.01
TOP3A-220ENST00000585031 PARNO95453 639 aaKnown RBP21.35■■□□□ 1.01
TOP3A-220ENST00000585031 MMP3P08254 477 aa21.35■■□□□ 1.01
TOP3A-220ENST00000585031 ARHGAP1Q07960 439 aa21.35■■□□□ 1.01
TOP3A-220ENST00000585031 MKRN4PQ13434 485 aaPredicted RBP21.35■■□□□ 1.01
TOP3A-220ENST00000585031 HIC1Q14526 733 aa21.35■■□□□ 1.01
TOP3A-220ENST00000585031 COL19A1Q14993 1142 aa21.35■■□□□ 1.01
TOP3A-220ENST00000585031 LY6KQ17RY6 165 aa21.35■■□□□ 1.01
TOP3A-220ENST00000585031 TBC1D5Q92609 795 aa21.35■■□□□ 1.01
TOP3A-220ENST00000585031 MRPL38Q96DV4 380 aaKnown RBP21.35■■□□□ 1.01
TOP3A-220ENST00000585031 HDAC6Q9UBN7 1215 aa21.35■■□□□ 1.01
TOP3A-220ENST00000585031 ZNF200P98182 395 aaPredicted RBP21.34■■□□□ 1.01
TOP3A-220ENST00000585031 ZMYM1Q5SVZ6 1142 aa21.34■■□□□ 1.01
TOP3A-220ENST00000585031 CCDC155Q8N6L0 562 aa21.34■■□□□ 1.01
TOP3A-220ENST00000585031 FBXO22Q8NEZ5 403 aa21.34■■□□□ 1.01
TOP3A-220ENST00000585031 MFSD14AQ96MC6 490 aa21.34■■□□□ 1.01
TOP3A-220ENST00000585031 NACAP1Q9BZK3 213 aa21.34■■□□□ 1.01
TOP3A-220ENST00000585031 GTF2IRD1Q9UHL9 959 aa21.34■■□□□ 1.01
TOP3A-220ENST00000585031 TECTAO75443 2155 aa21.33■■□□□ 1.01
TOP3A-220ENST00000585031 SLC3A2P08195 630 aaKnown RBP21.33■■□□□ 1.01
TOP3A-220ENST00000585031 ZNF618Q5T7W0 954 aa21.33■■□□□ 1.01
TOP3A-220ENST00000585031 CHST3Q7LGC8 479 aa21.33■■□□□ 1.01
TOP3A-220ENST00000585031 TMEM47Q9BQJ4 181 aa21.33■■□□□ 1.01
TOP3A-220ENST00000585031 CTNNA3Q9UI47 895 aa21.33■■□□□ 1.01
TOP3A-220ENST00000585031 RANBP6O60518 1105 aaKnown RBP21.32■■□□□ 1
TOP3A-220ENST00000585031 IKBKEQ14164 716 aa21.32■■□□□ 1
TOP3A-220ENST00000585031 VPS53Q5VIR6 699 aa21.32■■□□□ 1
TOP3A-220ENST00000585031 ADHFE1Q8IWW8 467 aa21.32■■□□□ 1
TOP3A-220ENST00000585031 DNERQ8NFT8 737 aa21.32■■□□□ 1
TOP3A-220ENST00000585031 PABPC5Q96DU9 382 aaKnown RBP21.32■■□□□ 1
TOP3A-220ENST00000585031 OSBPL7Q9BZF2 842 aa21.32■■□□□ 1
TOP3A-220ENST00000585031 ST18O60284 1047 aa21.31■■□□□ 1
TOP3A-220ENST00000585031 EFCAB14O75071 495 aa21.31■■□□□ 1
TOP3A-220ENST00000585031 HTRA4P83105 476 aaPredicted RBP21.31■■□□□ 1
TOP3A-220ENST00000585031 PPP4R3BQ5MIZ7 849 aa21.31■■□□□ 1
TOP3A-220ENST00000585031 SEPT14Q6ZU15 432 aa21.31■■□□□ 1
TOP3A-220ENST00000585031 SP7Q8TDD2 431 aaPredicted RBP21.31■■□□□ 1
TOP3A-220ENST00000585031 ALG1Q9BT22 464 aa21.31■■□□□ 1
TOP3A-220ENST00000585031 COL20A1Q9P218 1284 aa21.31■■□□□ 1
TOP3A-220ENST00000585031 FAM50BQ9Y247 325 aa21.31■■□□□ 1
TOP3A-220ENST00000585031 INSL6Q9Y581 213 aa21.31■■□□□ 1
TOP3A-220ENST00000585031 FGRP09769 529 aa21.3■■□□□ 1
TOP3A-220ENST00000585031 PDHBP11177 359 aa21.3■■□□□ 1
TOP3A-220ENST00000585031 IRS1P35568 1242 aa21.3■■□□□ 1
TOP3A-220ENST00000585031 PSEN2P49810 448 aa21.3■■□□□ 1
TOP3A-220ENST00000585031 EPC2Q52LR7 807 aa21.3■■□□□ 1
TOP3A-220ENST00000585031 TCEAL5Q5H9L2 206 aa21.3■■□□□ 1
TOP3A-220ENST00000585031 TAAR1Q96RJ0 339 aa21.3■■□□□ 1
TOP3A-220ENST00000585031 UPF3BQ9BZI7 483 aaKnown RBP21.3■■□□□ 1
TOP3A-220ENST00000585031 CPVLQ9H3G5 476 aa21.3■■□□□ 1
TOP3A-220ENST00000585031 ANAPC4Q9UJX5 808 aa21.3■■□□□ 1
TOP3A-220ENST00000585031 HAS3O00219 553 aa21.29■■□□□ 1
TOP3A-220ENST00000585031 LGR5O75473 907 aa21.29■■□□□ 1
TOP3A-220ENST00000585031 GH1P01241 217 aa21.29■■□□□ 1
TOP3A-220ENST00000585031 MS4A1P11836 297 aa21.29■■□□□ 1
TOP3A-220ENST00000585031 LTBRP36941 435 aa21.29■■□□□ 1
TOP3A-220ENST00000585031 PTPROQ16827 1216 aa21.29■■□□□ 1
TOP3A-220ENST00000585031 C20orf194Q5TEA3 1177 aa21.29■■□□□ 1
TOP3A-220ENST00000585031 DBF4BQ8NFT6 615 aa21.29■■□□□ 1
TOP3A-220ENST00000585031 PI4K2BQ8TCG2 481 aa21.29■■□□□ 1
TOP3A-220ENST00000585031 OTUD7AQ8TE49 926 aaPredicted RBP21.29■■□□□ 1
TOP3A-220ENST00000585031 CRBNQ96SW2 442 aa21.29■■□□□ 1
TOP3A-220ENST00000585031 ORC4O43929 436 aa21.28■■□□□ 1
TOP3A-220ENST00000585031 ZNF286BP0CG31 522 aa21.28■■□□□ 1
TOP3A-220ENST00000585031 TOP1P11387 765 aaKnown RBP21.28■■□□□ 1
TOP3A-220ENST00000585031 PTK7Q13308 1070 aa21.28■■□□□ 1
TOP3A-220ENST00000585031 HERC4Q5GLZ8 1057 aaPredicted RBP21.28■■□□□ 1
TOP3A-220ENST00000585031 BMP8AQ7Z5Y6 402 aa21.28■■□□□ 1
TOP3A-220ENST00000585031 BANK1Q8NDB2 785 aa21.28■■□□□ 1
TOP3A-220ENST00000585031 PRSS33Q8NF86 280 aa21.28■■□□□ 1
TOP3A-220ENST00000585031 CASTP20810 708 aaKnown RBP21.27■■□□□ 1
TOP3A-220ENST00000585031 ZNF543Q08ER8 600 aa21.27■■□□□ 1
TOP3A-220ENST00000585031 USH1GQ495M9 461 aa21.27■■□□□ 1
TOP3A-220ENST00000585031 TIGD5Q53EQ6 642 aa21.27■■□□□ 1
TOP3A-220ENST00000585031 MYOCDQ8IZQ8 938 aa21.27■■□□□ 1
TOP3A-220ENST00000585031 C7orf31Q8N865 590 aa21.27■■□□□ 1
TOP3A-220ENST00000585031 DCTPP1Q9H773 170 aa21.27■■□□□ 1
TOP3A-220ENST00000585031 DDX41Q9UJV9 622 aaKnown RBP21.27■■□□□ 1
TOP3A-220ENST00000585031 WDR19Q8NEZ3 1342 aa21.27■□□□□ 0.99
TOP3A-220ENST00000585031 MYH6P13533 1939 aa21.26■□□□□ 0.99
TOP3A-220ENST00000585031 H3BNC9 293 aa21.26■□□□□ 0.99
TOP3A-220ENST00000585031 GPM6BQ13491 265 aa21.26■□□□□ 0.99
TOP3A-220ENST00000585031 MFSD10Q14728 455 aa21.26■□□□□ 0.99
TOP3A-220ENST00000585031 DGKDQ16760 1214 aa21.26■□□□□ 0.99
TOP3A-220ENST00000585031 KIAA0753Q2KHM9 967 aa21.26■□□□□ 0.99
TOP3A-220ENST00000585031 IER5LQ5T953 404 aa21.26■□□□□ 0.99
TOP3A-220ENST00000585031 RGS22Q8NE09 1264 aa21.26■□□□□ 0.99
TOP3A-220ENST00000585031 SAMD11Q96NU1 681 aa21.26■□□□□ 0.99
TOP3A-220ENST00000585031 RALGAPA2Q2PPJ7 1873 aa21.26■□□□□ 0.99
TOP3A-220ENST00000585031 MYO15AQ9UKN7 3530 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms