RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 ISM2Q6H9L7 571 aa16.84■□□□□ 0.29
CDK5RAP3-236ENST00000584991 USP17L6PQ6QN14 398 aa16.84■□□□□ 0.29
CDK5RAP3-236ENST00000584991 RLFQ13129 1914 aa16.84■□□□□ 0.29
CDK5RAP3-236ENST00000584991 CDK11BP21127 795 aaKnown RBP16.83■□□□□ 0.28
CDK5RAP3-236ENST00000584991 MCM7P33993 719 aa16.83■□□□□ 0.28
CDK5RAP3-236ENST00000584991 SYT10Q6XYQ8 523 aa16.83■□□□□ 0.28
CDK5RAP3-236ENST00000584991 TBCKQ8TEA7 893 aa16.83■□□□□ 0.28
CDK5RAP3-236ENST00000584991 GSDMAQ96QA5 445 aa16.83■□□□□ 0.28
CDK5RAP3-236ENST00000584991 CTAGE1Q96RT6 745 aa16.83■□□□□ 0.28
CDK5RAP3-236ENST00000584991 FAM53CQ9NYF3 392 aa16.83■□□□□ 0.28
CDK5RAP3-236ENST00000584991 SERTAD1Q9UHV2 236 aa16.83■□□□□ 0.28
CDK5RAP3-236ENST00000584991 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.83■□□□□ 0.281e-7■■□□□ 13.3
CDK5RAP3-236ENST00000584991 OPLAHO14841 1288 aa16.82■□□□□ 0.28
CDK5RAP3-236ENST00000584991 SLFN14P0C7P3 912 aa16.82■□□□□ 0.28
CDK5RAP3-236ENST00000584991 CATSPERGQ6ZRH7 1159 aa16.82■□□□□ 0.28
CDK5RAP3-236ENST00000584991 CPXCR1Q8N123 301 aa16.82■□□□□ 0.28
CDK5RAP3-236ENST00000584991 OPTNQ96CV9 577 aa16.82■□□□□ 0.28
CDK5RAP3-236ENST00000584991 AGBL1Q96MI9 1066 aa16.82■□□□□ 0.28
CDK5RAP3-236ENST00000584991 SLC38A10Q9HBR0 1119 aa16.82■□□□□ 0.28
CDK5RAP3-236ENST00000584991 CCPG1Q9ULG6 757 aa16.82■□□□□ 0.28
CDK5RAP3-236ENST00000584991 NFE2L3Q9Y4A8 694 aa16.82■□□□□ 0.28
CDK5RAP3-236ENST00000584991 ZNF536O15090 1300 aa16.82■□□□□ 0.28
CDK5RAP3-236ENST00000584991 COL11A1P12107 1806 aaPredicted RBP16.82■□□□□ 0.28
CDK5RAP3-236ENST00000584991 MYH7BA7E2Y1 1941 aa16.82■□□□□ 0.28
CDK5RAP3-236ENST00000584991 MEIS2O14770 477 aa16.82■□□□□ 0.28
CDK5RAP3-236ENST00000584991 KIF20AO95235 890 aa16.82■□□□□ 0.28
CDK5RAP3-236ENST00000584991 ICAM1P05362 532 aa16.82■□□□□ 0.28
CDK5RAP3-236ENST00000584991 PPIL2Q13356 520 aa16.82■□□□□ 0.28
CDK5RAP3-236ENST00000584991 TRIM65Q6PJ69 517 aa16.82■□□□□ 0.28
CDK5RAP3-236ENST00000584991 SH3RF1Q7Z6J0 888 aa16.82■□□□□ 0.28
CDK5RAP3-236ENST00000584991 NEK8Q86SG6 692 aa16.82■□□□□ 0.28
CDK5RAP3-236ENST00000584991 REXO1L1PQ8IX06 675 aa16.82■□□□□ 0.28
CDK5RAP3-236ENST00000584991 ATG4CQ96DT6 458 aa16.82■□□□□ 0.28
CDK5RAP3-236ENST00000584991 BAG1Q99933 345 aaPredicted RBP16.82■□□□□ 0.28
CDK5RAP3-236ENST00000584991 NAA15Q9BXJ9 866 aaKnown RBP16.82■□□□□ 0.28
CDK5RAP3-236ENST00000584991 RAVER2Q9HCJ3 691 aaKnown RBP16.82■□□□□ 0.28
CDK5RAP3-236ENST00000584991 CTDP1Q9Y5B0 961 aaPredicted RBP16.82■□□□□ 0.28
CDK5RAP3-236ENST00000584991 VWA5AO00534 786 aa16.81■□□□□ 0.28
CDK5RAP3-236ENST00000584991 CXCL11O14625 94 aa16.81■□□□□ 0.28
CDK5RAP3-236ENST00000584991 ZBED4O75132 1171 aa16.81■□□□□ 0.28
CDK5RAP3-236ENST00000584991 DSG3P32926 999 aa16.81■□□□□ 0.28
CDK5RAP3-236ENST00000584991 PTGDRQ13258 359 aa16.81■□□□□ 0.28
CDK5RAP3-236ENST00000584991 COG2Q14746 738 aa16.81■□□□□ 0.28
CDK5RAP3-236ENST00000584991 NR1I3Q14994 352 aa16.81■□□□□ 0.28
CDK5RAP3-236ENST00000584991 LETM2Q2VYF4 491 aa16.81■□□□□ 0.28
CDK5RAP3-236ENST00000584991 TREML2Q5T2D2 321 aa16.81■□□□□ 0.28
CDK5RAP3-236ENST00000584991 GADL1Q6ZQY3 521 aa16.81■□□□□ 0.28
CDK5RAP3-236ENST00000584991 TMEM139Q8IV31 216 aa16.81■□□□□ 0.28
CDK5RAP3-236ENST00000584991 SLC10A4Q96EP9 437 aa16.81■□□□□ 0.28
CDK5RAP3-236ENST00000584991 WNK4Q96J92 1243 aa16.81■□□□□ 0.28
CDK5RAP3-236ENST00000584991 GBA2Q9HCG7 927 aaPredicted RBP16.81■□□□□ 0.28
CDK5RAP3-236ENST00000584991 PRDM4Q9UKN5 801 aa16.81■□□□□ 0.28
CDK5RAP3-236ENST00000584991 MRPL11Q9Y3B7 192 aaKnown RBP16.81■□□□□ 0.28
CDK5RAP3-236ENST00000584991 LOC285556D6RIA3 1793 aa16.81■□□□□ 0.28
CDK5RAP3-236ENST00000584991 ABCB11O95342 1321 aa16.8■□□□□ 0.28
CDK5RAP3-236ENST00000584991 A0A0G2JLL6 359 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP3-236ENST00000584991 A0A1B0GTH6 734 aa16.8■□□□□ 0.28
CDK5RAP3-236ENST00000584991 CELF2O95319 508 aaKnown RBP16.8■□□□□ 0.28
CDK5RAP3-236ENST00000584991 H2AFXP16104 143 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP3-236ENST00000584991 ATP2C1P98194 919 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP3-236ENST00000584991 SEMA3FQ13275 785 aa16.8■□□□□ 0.28
CDK5RAP3-236ENST00000584991 KMT5BQ4FZB7 885 aa16.8■□□□□ 0.28
CDK5RAP3-236ENST00000584991 SPATA1Q5VX52 437 aa16.8■□□□□ 0.28
CDK5RAP3-236ENST00000584991 PRRT2Q7Z6L0 340 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP3-236ENST00000584991 CREBRFQ8IUR6 639 aa16.8■□□□□ 0.28
CDK5RAP3-236ENST00000584991 PANX2Q96RD6 677 aa16.8■□□□□ 0.28
CDK5RAP3-236ENST00000584991 CSRNP2Q9H175 543 aa16.8■□□□□ 0.28
CDK5RAP3-236ENST00000584991 DNAI1Q9UI46 699 aa16.8■□□□□ 0.28
CDK5RAP3-236ENST00000584991 KCNH4Q9UQ05 1017 aa16.8■□□□□ 0.28
CDK5RAP3-236ENST00000584991 CCNT1O60563 726 aaKnown RBP16.8■□□□□ 0.28
CDK5RAP3-236ENST00000584991 FDX1P10109 184 aa16.8■□□□□ 0.28
CDK5RAP3-236ENST00000584991 HOXA13P31271 388 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP3-236ENST00000584991 GRIN1Q05586 938 aa16.8■□□□□ 0.28
CDK5RAP3-236ENST00000584991 KRT222Q8N1A0 295 aa16.8■□□□□ 0.28
CDK5RAP3-236ENST00000584991 TBC1D5Q92609 795 aa16.8■□□□□ 0.28
CDK5RAP3-236ENST00000584991 P2RX7Q99572 595 aaKnown RBP16.8■□□□□ 0.28
CDK5RAP3-236ENST00000584991 ARID3AQ99856 593 aa16.8■□□□□ 0.28
CDK5RAP3-236ENST00000584991 PPP2R2CQ9Y2T4 447 aa16.8■□□□□ 0.28
CDK5RAP3-236ENST00000584991 EFCAB8A8MWE9 144 aa16.79■□□□□ 0.28
CDK5RAP3-236ENST00000584991 ATP8B1O43520 1251 aa16.79■□□□□ 0.28
CDK5RAP3-236ENST00000584991 CFBP00751 764 aa16.79■□□□□ 0.28
CDK5RAP3-236ENST00000584991 GJA5P36382 358 aa16.79■□□□□ 0.28
CDK5RAP3-236ENST00000584991 FKBP1BP68106 108 aa16.79■□□□□ 0.28
CDK5RAP3-236ENST00000584991 CHADLQ6NUI6 762 aa16.79■□□□□ 0.28
CDK5RAP3-236ENST00000584991 C4orf32Q8N8J7 132 aa16.79■□□□□ 0.28
CDK5RAP3-236ENST00000584991 C2orf69Q8N8R5 385 aa16.79■□□□□ 0.28
CDK5RAP3-236ENST00000584991 PROCA1Q8NCQ7 364 aaPredicted RBP16.79■□□□□ 0.28
CDK5RAP3-236ENST00000584991 ANO3Q9BYT9 981 aa16.79■□□□□ 0.28
CDK5RAP3-236ENST00000584991 INTS13Q9NVM9 706 aa16.79■□□□□ 0.28
CDK5RAP3-236ENST00000584991 ARGLU1Q9NWB6 273 aaPredicted RBP16.79■□□□□ 0.28
CDK5RAP3-236ENST00000584991 UNCXA6NJT0 531 aa16.78■□□□□ 0.28
CDK5RAP3-236ENST00000584991 SPDYE4A6NLX3 237 aa16.78■□□□□ 0.28
CDK5RAP3-236ENST00000584991 PIK3CDO00329 1044 aa16.78■□□□□ 0.28
CDK5RAP3-236ENST00000584991 FOXN1O15353 648 aa16.78■□□□□ 0.28
CDK5RAP3-236ENST00000584991 EDIL3O43854 480 aa16.78■□□□□ 0.28
CDK5RAP3-236ENST00000584991 ALAS1P13196 640 aa16.78■□□□□ 0.28
CDK5RAP3-236ENST00000584991 TUBB4BP68371 445 aa16.78■□□□□ 0.28
CDK5RAP3-236ENST00000584991 AP3B2Q13367 1082 aa16.78■□□□□ 0.28
CDK5RAP3-236ENST00000584991 BMS1Q14692 1282 aaKnown RBP16.78■□□□□ 0.28
CDK5RAP3-236ENST00000584991 NAA30Q147X3 362 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms