RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 XRRA1Q6P2D8 792 aa18.69■□□□□ 0.58
ERBB2-222ENST00000584908 FERMT2Q96AC1 680 aa18.69■□□□□ 0.58
ERBB2-222ENST00000584908 GLT8D2Q9H1C3 349 aa18.69■□□□□ 0.58
ERBB2-222ENST00000584908 NCOA5Q9HCD5 579 aaKnown RBP18.69■□□□□ 0.58
ERBB2-222ENST00000584908 RIC8AQ9NPQ8 531 aa18.69■□□□□ 0.58
ERBB2-222ENST00000584908 ESYT2A0FGR8 921 aa18.68■□□□□ 0.58
ERBB2-222ENST00000584908 ATN1P54259 1190 aaPredicted RBP18.68■□□□□ 0.58
ERBB2-222ENST00000584908 CCT2P78371 535 aaKnown RBP18.68■□□□□ 0.58
ERBB2-222ENST00000584908 MRPS9P82933 396 aaKnown RBP18.68■□□□□ 0.58
ERBB2-222ENST00000584908 BEX3Q00994 111 aa18.68■□□□□ 0.58
ERBB2-222ENST00000584908 PCNX4Q63HM2 1172 aa18.68■□□□□ 0.58
ERBB2-222ENST00000584908 KCNV1Q6PIU1 500 aa18.68■□□□□ 0.58
ERBB2-222ENST00000584908 SEPT14Q6ZU15 432 aa18.68■□□□□ 0.58
ERBB2-222ENST00000584908 PHKBQ93100 1093 aa18.68■□□□□ 0.58
ERBB2-222ENST00000584908 INPP4AQ96PE3 977 aaPredicted RBP18.68■□□□□ 0.58
ERBB2-222ENST00000584908 DDX41Q9UJV9 622 aaKnown RBP18.68■□□□□ 0.58
ERBB2-222ENST00000584908 SCN10AQ9Y5Y9 1956 aa18.67■□□□□ 0.58
ERBB2-222ENST00000584908 A6NJR5 290 aa18.67■□□□□ 0.58
ERBB2-222ENST00000584908 CABYRO75952 493 aa18.67■□□□□ 0.58
ERBB2-222ENST00000584908 TGFB3P10600 412 aa18.67■□□□□ 0.58
ERBB2-222ENST00000584908 MYCLP12524 364 aaPredicted RBP18.67■□□□□ 0.58
ERBB2-222ENST00000584908 CPT1AP50416 773 aa18.67■□□□□ 0.58
ERBB2-222ENST00000584908 AK2P54819 239 aa18.67■□□□□ 0.58
ERBB2-222ENST00000584908 RTP1P59025 263 aa18.67■□□□□ 0.58
ERBB2-222ENST00000584908 C7orf61Q8IZ16 206 aa18.67■□□□□ 0.58
ERBB2-222ENST00000584908 EMID1Q96A84 441 aaPredicted RBP18.67■□□□□ 0.58
ERBB2-222ENST00000584908 GLT1D1Q96MS3 346 aa18.67■□□□□ 0.58
ERBB2-222ENST00000584908 LARP6Q9BRS8 491 aaKnown RBP18.67■□□□□ 0.58
ERBB2-222ENST00000584908 STARD7Q9NQZ5 370 aa18.67■□□□□ 0.58
ERBB2-222ENST00000584908 TPCN1Q9ULQ1 816 aa18.67■□□□□ 0.58
ERBB2-222ENST00000584908 RANBP2P49792 3224 aaKnown RBP18.66■□□□□ 0.58
ERBB2-222ENST00000584908 ZEB2O60315 1214 aa18.66■□□□□ 0.58
ERBB2-222ENST00000584908 PFKFB2O60825 505 aa18.66■□□□□ 0.58
ERBB2-222ENST00000584908 CLK2P49760 499 aaKnown RBP18.66■□□□□ 0.58
ERBB2-222ENST00000584908 ADCY7P51828 1080 aa18.66■□□□□ 0.58
ERBB2-222ENST00000584908 UBE2SQ16763 222 aa18.66■□□□□ 0.58
ERBB2-222ENST00000584908 LY6KQ17RY6 165 aa18.66■□□□□ 0.58
ERBB2-222ENST00000584908 OR6J1Q8NGC5 347 aa18.66■□□□□ 0.58
ERBB2-222ENST00000584908 COPS5Q92905 334 aa18.66■□□□□ 0.58
ERBB2-222ENST00000584908 ZMYND12Q9H0C1 365 aa18.66■□□□□ 0.58
ERBB2-222ENST00000584908 SMCO2A6NFE2 343 aa18.65■□□□□ 0.58
ERBB2-222ENST00000584908 FOSP01100 380 aaPredicted RBP18.65■□□□□ 0.58
ERBB2-222ENST00000584908 GH1P01241 217 aa18.65■□□□□ 0.58
ERBB2-222ENST00000584908 ICAM3P32942 547 aa18.65■□□□□ 0.58
ERBB2-222ENST00000584908 RBM25P49756 843 aaKnown RBP18.65■□□□□ 0.58
ERBB2-222ENST00000584908 CDK7P50613 346 aa18.65■□□□□ 0.58
ERBB2-222ENST00000584908 NEK4P51957 841 aa18.65■□□□□ 0.58
ERBB2-222ENST00000584908 AKAP17AQ02040 695 aaKnown RBP18.65■□□□□ 0.58
ERBB2-222ENST00000584908 ARHGAP1Q07960 439 aa18.65■□□□□ 0.58
ERBB2-222ENST00000584908 ANKRD33Q7Z3H0 272 aa18.65■□□□□ 0.58
ERBB2-222ENST00000584908 SLC43A3Q8NBI5 491 aa18.65■□□□□ 0.58
ERBB2-222ENST00000584908 CCDC12Q8WUD4 166 aaPredicted RBP18.65■□□□□ 0.58
ERBB2-222ENST00000584908 TOX2Q96NM4 488 aa18.65■□□□□ 0.58
ERBB2-222ENST00000584908 KIF2CQ99661 725 aa18.65■□□□□ 0.58
ERBB2-222ENST00000584908 SLC26A6Q9BXS9 759 aa18.65■□□□□ 0.58
ERBB2-222ENST00000584908 SEZ6LQ9BYH1 1024 aa18.65■□□□□ 0.58
ERBB2-222ENST00000584908 PCDHA6Q9UN73 950 aa18.65■□□□□ 0.58
ERBB2-222ENST00000584908 PCDHA8Q9Y5H6 950 aa18.65■□□□□ 0.58
ERBB2-222ENST00000584908 MRVI1Q9Y6F6 885 aa18.65■□□□□ 0.58
ERBB2-222ENST00000584908 LTBP2Q14767 1821 aa18.64■□□□□ 0.57
ERBB2-222ENST00000584908 A0A0U1RQG5 324 aaPredicted RBP18.64■□□□□ 0.57
ERBB2-222ENST00000584908 SPDYE3A6NKU9 549 aa18.64■□□□□ 0.57
ERBB2-222ENST00000584908 CPLX1O14810 134 aa18.64■□□□□ 0.57
ERBB2-222ENST00000584908 PURAQ00577 322 aaKnown RBP18.64■□□□□ 0.57
ERBB2-222ENST00000584908 SCRN1Q12765 414 aa18.64■□□□□ 0.57
ERBB2-222ENST00000584908 AP3B2Q13367 1082 aa18.64■□□□□ 0.57
ERBB2-222ENST00000584908 GNPTABQ3T906 1256 aa18.64■□□□□ 0.57
ERBB2-222ENST00000584908 TRIM60Q495X7 471 aa18.64■□□□□ 0.57
ERBB2-222ENST00000584908 BRDTQ58F21 947 aaPredicted RBP18.64■□□□□ 0.57
ERBB2-222ENST00000584908 CXCL17Q6UXB2 119 aa18.64■□□□□ 0.57
ERBB2-222ENST00000584908 TRIM22Q8IYM9 498 aa18.64■□□□□ 0.57
ERBB2-222ENST00000584908 FAM177A1Q8N128 213 aaPredicted RBP18.64■□□□□ 0.57
ERBB2-222ENST00000584908 SH3GLB2Q9NR46 395 aa18.64■□□□□ 0.57
ERBB2-222ENST00000584908 POLR3EQ9NVU0 708 aa18.64■□□□□ 0.57
ERBB2-222ENST00000584908 ATP11BQ9Y2G3 1177 aa18.64■□□□□ 0.57
ERBB2-222ENST00000584908 SPATA31C2B4DYI2 1134 aa18.63■□□□□ 0.57
ERBB2-222ENST00000584908 KPNA6O60684 536 aa18.63■□□□□ 0.57
ERBB2-222ENST00000584908 SSRP1Q08945 709 aaKnown RBP18.63■□□□□ 0.57
ERBB2-222ENST00000584908 STK3Q13188 491 aa18.63■□□□□ 0.57
ERBB2-222ENST00000584908 CPLX2Q6PUV4 134 aaKnown RBP18.63■□□□□ 0.57
ERBB2-222ENST00000584908 C22orf23Q9BZE7 217 aa18.63■□□□□ 0.57
ERBB2-222ENST00000584908 SLKQ9H2G2 1235 aaPredicted RBP18.63■□□□□ 0.57
ERBB2-222ENST00000584908 PRO3102Q9H379 93 aa18.63■□□□□ 0.57
ERBB2-222ENST00000584908 EHMT1Q9H9B1 1298 aa18.63■□□□□ 0.57
ERBB2-222ENST00000584908 DOCK5Q9H7D0 1870 aa18.62■□□□□ 0.57
ERBB2-222ENST00000584908 MROH7Q68CQ1 1323 aa18.62■□□□□ 0.57
ERBB2-222ENST00000584908 ARVCFO00192 962 aa18.62■□□□□ 0.57
ERBB2-222ENST00000584908 DEXIO95424 95 aa18.62■□□□□ 0.57
ERBB2-222ENST00000584908 HOXD8P13378 290 aaPredicted RBP18.62■□□□□ 0.57
ERBB2-222ENST00000584908 SP2Q02086 613 aa18.62■□□□□ 0.57
ERBB2-222ENST00000584908 TLE2Q04725 743 aa18.62■□□□□ 0.57
ERBB2-222ENST00000584908 SEMA3FQ13275 785 aa18.62■□□□□ 0.57
ERBB2-222ENST00000584908 LAMC2Q13753 1193 aa18.62■□□□□ 0.57
ERBB2-222ENST00000584908 MYSM1Q5VVJ2 828 aa18.62■□□□□ 0.57
ERBB2-222ENST00000584908 MCTP2Q6DN12 878 aa18.62■□□□□ 0.57
ERBB2-222ENST00000584908 CCDC148Q8NFR7 591 aa18.62■□□□□ 0.57
ERBB2-222ENST00000584908 GRIN2DO15399 1336 aa18.61■□□□□ 0.57
ERBB2-222ENST00000584908 STK36Q9NRP7 1315 aa18.61■□□□□ 0.57
ERBB2-222ENST00000584908 FIBPO43427 364 aa18.61■□□□□ 0.57
ERBB2-222ENST00000584908 PPFIA3O75145 1194 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms