RNA–Protein interactions for RNA: ENST00000584842.1

CTC1-213, Transcript of CST telomere replication complex component 1, humanhuman

TSL 3

Gene CTC1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-213ENST00000584842 PGM5Q15124 567 aa9.18□□□□□ -0.94
CTC1-213ENST00000584842 ANKRD1Q15327 319 aa9.18□□□□□ -0.94
CTC1-213ENST00000584842 TRIM60Q495X7 471 aa9.18□□□□□ -0.94
CTC1-213ENST00000584842 C1orf53Q5VUE5 145 aa9.18□□□□□ -0.94
CTC1-213ENST00000584842 XRRA1Q6P2D8 792 aa9.18□□□□□ -0.94
CTC1-213ENST00000584842 TRIM22Q8IYM9 498 aa9.18□□□□□ -0.94
CTC1-213ENST00000584842 GPKOWQ92917 476 aaPredicted RBP eCLIP9.18□□□□□ -0.94
CTC1-213ENST00000584842 LBHD1Q9BQE6 289 aaPredicted RBP9.18□□□□□ -0.94
CTC1-213ENST00000584842 SEZ6LQ9BYH1 1024 aa9.18□□□□□ -0.94
CTC1-213ENST00000584842 AGXT2Q9BYV1 514 aa9.18□□□□□ -0.94
CTC1-213ENST00000584842 UPF3BQ9BZI7 483 aaKnown RBP9.18□□□□□ -0.94
CTC1-213ENST00000584842 PRDM5Q9NQX1 630 aaPredicted RBP9.18□□□□□ -0.94
CTC1-213ENST00000584842 ZMYND8Q9ULU4 1186 aaPredicted RBP9.18□□□□□ -0.94
CTC1-213ENST00000584842 FRMPD4Q14CM0 1322 aa9.17□□□□□ -0.94
CTC1-213ENST00000584842 hCG_1642624A0A1W2PR95 340 aa9.17□□□□□ -0.94
CTC1-213ENST00000584842 DCDC2CA8MYV0 355 aa9.17□□□□□ -0.94
CTC1-213ENST00000584842 KPNA6O60684 536 aa9.17□□□□□ -0.94
CTC1-213ENST00000584842 PQBP1O60828 265 aaKnown RBP9.17□□□□□ -0.94
CTC1-213ENST00000584842 CDKL5O76039 1030 aa9.17□□□□□ -0.94
CTC1-213ENST00000584842 SCG2P13521 617 aa9.17□□□□□ -0.94
CTC1-213ENST00000584842 SYN1P17600 705 aa9.17□□□□□ -0.94
CTC1-213ENST00000584842 CDC27P30260 824 aa9.17□□□□□ -0.94
CTC1-213ENST00000584842 WWC2Q6AWC2 1192 aa9.17□□□□□ -0.94
CTC1-213ENST00000584842 CCSAPQ6IQ19 270 aaPredicted RBP9.17□□□□□ -0.94
CTC1-213ENST00000584842 CHRDL2Q6WN34 429 aa9.17□□□□□ -0.94
CTC1-213ENST00000584842 CCDC148Q8NFR7 591 aa9.17□□□□□ -0.94
CTC1-213ENST00000584842 UPF2Q9HAU5 1272 aaKnown RBP9.17□□□□□ -0.94
CTC1-213ENST00000584842 BARHL2Q9NY43 387 aa9.17□□□□□ -0.94
CTC1-213ENST00000584842 V9GY48 417 aaPredicted RBP9.17□□□□□ -0.94
CTC1-213ENST00000584842 DOCK5Q9H7D0 1870 aa9.17□□□□□ -0.94
CTC1-213ENST00000584842 SCN10AQ9Y5Y9 1956 aa9.16□□□□□ -0.94
CTC1-213ENST00000584842 FOSP01100 380 aaPredicted RBP9.16□□□□□ -0.94
CTC1-213ENST00000584842 MYL3P08590 195 aa9.16□□□□□ -0.94
CTC1-213ENST00000584842 CLTBP09497 229 aa9.16□□□□□ -0.94
CTC1-213ENST00000584842 TGFB3P10600 412 aa9.16□□□□□ -0.94
CTC1-213ENST00000584842 PDIA3P30101 505 aaKnown RBP9.16□□□□□ -0.94
CTC1-213ENST00000584842 ADD1P35611 737 aaKnown RBP9.16□□□□□ -0.94
CTC1-213ENST00000584842 EVCP57679 992 aa9.16□□□□□ -0.94
CTC1-213ENST00000584842 TLE2Q04725 743 aa9.16□□□□□ -0.94
CTC1-213ENST00000584842 FUT2Q10981 343 aa9.16□□□□□ -0.94
CTC1-213ENST00000584842 TOB2Q14106 344 aaPredicted RBP9.16□□□□□ -0.94
CTC1-213ENST00000584842 PFKFB3Q16875 520 aaPredicted RBP9.16□□□□□ -0.94
CTC1-213ENST00000584842 PCNX4Q63HM2 1172 aa9.16□□□□□ -0.94
CTC1-213ENST00000584842 MCTP2Q6DN12 878 aa9.16□□□□□ -0.94
CTC1-213ENST00000584842 USP17L6PQ6QN14 398 aa9.16□□□□□ -0.94
CTC1-213ENST00000584842 CXCL17Q6UXB2 119 aa9.16□□□□□ -0.94
CTC1-213ENST00000584842 NLRX1Q86UT6 975 aa9.16□□□□□ -0.94
CTC1-213ENST00000584842 VSIG10LQ86VR7 867 aa9.16□□□□□ -0.94
CTC1-213ENST00000584842 DHX37Q8IY37 1157 aaKnown RBP9.16□□□□□ -0.94
CTC1-213ENST00000584842 BICD2Q8TD16 824 aa9.16□□□□□ -0.94
CTC1-213ENST00000584842 ZNF274Q96GC6 653 aaPredicted RBP9.16□□□□□ -0.94
CTC1-213ENST00000584842 CDHR1Q96JP9 859 aa9.16□□□□□ -0.94
CTC1-213ENST00000584842 TOX2Q96NM4 488 aa9.16□□□□□ -0.94
CTC1-213ENST00000584842 MTG1Q9BT17 334 aaPredicted RBP9.16□□□□□ -0.94
CTC1-213ENST00000584842 SLC26A6Q9BXS9 759 aa9.16□□□□□ -0.94
CTC1-213ENST00000584842 RNF26Q9BY78 433 aaPredicted RBP9.16□□□□□ -0.94
CTC1-213ENST00000584842 C6orf50Q9HD87 102 aa9.16□□□□□ -0.94
CTC1-213ENST00000584842 RIC8AQ9NPQ8 531 aa9.16□□□□□ -0.94
CTC1-213ENST00000584842 TRIOBPQ9H2D6 2365 aa9.15□□□□□ -0.94
CTC1-213ENST00000584842 A0A1W2PPC1 479 aa9.15□□□□□ -0.94
CTC1-213ENST00000584842 SMCO2A6NFE2 343 aa9.15□□□□□ -0.94
CTC1-213ENST00000584842 A6NJR5 290 aa9.15□□□□□ -0.94
CTC1-213ENST00000584842 STXBP3O00186 592 aa9.15□□□□□ -0.94
CTC1-213ENST00000584842 ARVCFO00192 962 aa9.15□□□□□ -0.94
CTC1-213ENST00000584842 NOP56O00567 594 aaKnown RBP9.15□□□□□ -0.94
CTC1-213ENST00000584842 MEIS2O14770 477 aa9.15□□□□□ -0.94
CTC1-213ENST00000584842 CTAGE5O15320 804 aa9.15□□□□□ -0.94
CTC1-213ENST00000584842 PRPF3O43395 683 aaKnown RBP9.15□□□□□ -0.94
CTC1-213ENST00000584842 FIBPO43427 364 aa9.15□□□□□ -0.94
CTC1-213ENST00000584842 ARIH2O95376 493 aa9.15□□□□□ -0.94
CTC1-213ENST00000584842 IFNAR1P17181 557 aa9.15□□□□□ -0.94
CTC1-213ENST00000584842 GNA11P29992 359 aa9.15□□□□□ -0.94
CTC1-213ENST00000584842 CCT2P78371 535 aaKnown RBP9.15□□□□□ -0.94
CTC1-213ENST00000584842 SSRP1Q08945 709 aaKnown RBP9.15□□□□□ -0.94
CTC1-213ENST00000584842 AP3B2Q13367 1082 aa9.15□□□□□ -0.94
CTC1-213ENST00000584842 ITGA7Q13683 1181 aa9.15□□□□□ -0.94
CTC1-213ENST00000584842 LAMC2Q13753 1193 aa9.15□□□□□ -0.94
CTC1-213ENST00000584842 DGKDQ16760 1214 aa9.15□□□□□ -0.94
CTC1-213ENST00000584842 UBE2SQ16763 222 aa9.15□□□□□ -0.94
CTC1-213ENST00000584842 LY6KQ17RY6 165 aa9.15□□□□□ -0.94
CTC1-213ENST00000584842 CCDC62Q6P9F0 684 aa9.15□□□□□ -0.94
CTC1-213ENST00000584842 ANKRD33Q7Z3H0 272 aa9.15□□□□□ -0.94
CTC1-213ENST00000584842 GIMAP8Q8ND71 665 aaPredicted RBP9.15□□□□□ -0.94
CTC1-213ENST00000584842 IL31RAQ8NI17 732 aa9.15□□□□□ -0.94
CTC1-213ENST00000584842 PPTC7Q8NI37 304 aa9.15□□□□□ -0.94
CTC1-213ENST00000584842 EMID1Q96A84 441 aaPredicted RBP9.15□□□□□ -0.94
CTC1-213ENST00000584842 KATNAL1Q9BW62 490 aa9.15□□□□□ -0.94
CTC1-213ENST00000584842 SLKQ9H2G2 1235 aaPredicted RBP9.15□□□□□ -0.94
CTC1-213ENST00000584842 MLXIPQ9HAP2 919 aa9.15□□□□□ -0.94
CTC1-213ENST00000584842 NCOA5Q9HCD5 579 aaKnown RBP9.15□□□□□ -0.94
CTC1-213ENST00000584842 PDLIM7Q9NR12 457 aa9.15□□□□□ -0.94
CTC1-213ENST00000584842 FAM217BQ9NTX9 383 aaPredicted RBP9.15□□□□□ -0.94
CTC1-213ENST00000584842 DDX41Q9UJV9 622 aaKnown RBP9.15□□□□□ -0.94
CTC1-213ENST00000584842 KAT6AQ92794 2004 aa9.15□□□□□ -0.94
CTC1-213ENST00000584842 ESYT2A0FGR8 921 aa9.14□□□□□ -0.95
CTC1-213ENST00000584842 DEXIO95424 95 aa9.14□□□□□ -0.95
CTC1-213ENST00000584842 GGPS1O95749 300 aa9.14□□□□□ -0.95
CTC1-213ENST00000584842 MMP3P08254 477 aa9.14□□□□□ -0.95
CTC1-213ENST00000584842 RAG1P15918 1043 aa9.14□□□□□ -0.95
CTC1-213ENST00000584842 UBA1P22314 1058 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms