RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 MARK3P27448 753 aa11.48□□□□□ -0.57
RFFL-212ENST00000584655 NAALADL2Q58DX5 795 aa11.48□□□□□ -0.57
RFFL-212ENST00000584655 LARP4BQ92615 738 aaKnown RBP11.48□□□□□ -0.57
RFFL-212ENST00000584655 BAG1Q99933 345 aaPredicted RBP11.48□□□□□ -0.57
RFFL-212ENST00000584655 DHX36Q9H2U1 1008 aaKnown RBP11.48□□□□□ -0.57
RFFL-212ENST00000584655 SPTLC3Q9NUV7 552 aa11.48□□□□□ -0.57
RFFL-212ENST00000584655 INTS13Q9NVM9 706 aa11.48□□□□□ -0.57
RFFL-212ENST00000584655 TELO2Q9Y4R8 837 aa11.48□□□□□ -0.57
RFFL-212ENST00000584655 USO1O60763 962 aaKnown RBP11.47□□□□□ -0.57
RFFL-212ENST00000584655 TPM1P09493 284 aa11.47□□□□□ -0.57
RFFL-212ENST00000584655 TEX35Q5T0J7 233 aa11.47□□□□□ -0.57
RFFL-212ENST00000584655 GPATCH4Q5T3I0 446 aaKnown RBP11.47□□□□□ -0.57
RFFL-212ENST00000584655 ANKRD40Q6AI12 368 aa11.47□□□□□ -0.57
RFFL-212ENST00000584655 SEPT14Q6ZU15 432 aa11.47□□□□□ -0.57
RFFL-212ENST00000584655 GOLGA8IPA6NC78 632 aa11.47□□□□□ -0.57
RFFL-212ENST00000584655 GOLGA8JA6NMD2 632 aa11.47□□□□□ -0.57
RFFL-212ENST00000584655 TISP43B9A030 160 aa11.47□□□□□ -0.57
RFFL-212ENST00000584655 FXR1P51114 621 aaKnown RBP eCLIP11.47□□□□□ -0.57
RFFL-212ENST00000584655 SYCP1Q15431 976 aa11.47□□□□□ -0.57
RFFL-212ENST00000584655 PHLDB2Q86SQ0 1253 aa11.47□□□□□ -0.57
RFFL-212ENST00000584655 MYCT1Q8N699 235 aa11.47□□□□□ -0.57
RFFL-212ENST00000584655 TNFRSF25Q93038 417 aa11.47□□□□□ -0.57
RFFL-212ENST00000584655 FAM212AQ96EL1 285 aa11.47□□□□□ -0.57
RFFL-212ENST00000584655 CHP1Q99653 195 aa11.47□□□□□ -0.57
RFFL-212ENST00000584655 RPAP3Q9H6T3 665 aaPredicted RBP11.47□□□□□ -0.57
RFFL-212ENST00000584655 ELP3Q9H9T3 547 aa11.47□□□□□ -0.57
RFFL-212ENST00000584655 SWAP70Q9UH65 585 aa11.47□□□□□ -0.57
RFFL-212ENST00000584655 SNED1Q8TER0 1413 aa11.47□□□□□ -0.57
RFFL-212ENST00000584655 SSTR3P32745 418 aaPredicted RBP11.47□□□□□ -0.57
RFFL-212ENST00000584655 RAPGEF1Q13905 1077 aa11.47□□□□□ -0.57
RFFL-212ENST00000584655 PPP2R5BQ15173 497 aa11.47□□□□□ -0.57
RFFL-212ENST00000584655 GRIPAP1Q4V328 841 aa11.47□□□□□ -0.57
RFFL-212ENST00000584655 KRT26Q7Z3Y9 468 aa11.47□□□□□ -0.57
RFFL-212ENST00000584655 FBXL16Q8N461 479 aa11.47□□□□□ -0.57
RFFL-212ENST00000584655 MLKLQ8NB16 471 aa11.47□□□□□ -0.57
RFFL-212ENST00000584655 CLMNQ96JQ2 1002 aa11.47□□□□□ -0.57
RFFL-212ENST00000584655 CCDC17Q96LX7 622 aa11.47□□□□□ -0.57
RFFL-212ENST00000584655 WDR11Q9BZH6 1224 aa11.47□□□□□ -0.57
RFFL-212ENST00000584655 CHORDC1Q9UHD1 332 aaPredicted RBP11.47□□□□□ -0.57
RFFL-212ENST00000584655 DACH1Q9UI36 760 aa11.47□□□□□ -0.57
RFFL-212ENST00000584655 SERPINA10Q9UK55 444 aa11.47□□□□□ -0.57
RFFL-212ENST00000584655 PAXBP1Q9Y5B6 917 aa11.47□□□□□ -0.57
RFFL-212ENST00000584655 SMCHD1A6NHR9 2005 aa11.47□□□□□ -0.57
RFFL-212ENST00000584655 CHD4Q14839 1912 aa11.47□□□□□ -0.57
RFFL-212ENST00000584655 MED24O75448 989 aa11.46□□□□□ -0.57
RFFL-212ENST00000584655 PCP11498 1178 aaKnown RBP11.46□□□□□ -0.57
RFFL-212ENST00000584655 ARHGAP29Q52LW3 1261 aa11.46□□□□□ -0.57
RFFL-212ENST00000584655 LRCH2Q5VUJ6 765 aa11.46□□□□□ -0.57
RFFL-212ENST00000584655 TMC4Q7Z404 712 aa11.46□□□□□ -0.57
RFFL-212ENST00000584655 NCAPG2Q86XI2 1143 aa11.46□□□□□ -0.57
RFFL-212ENST00000584655 SYCP3Q8IZU3 236 aa11.46□□□□□ -0.57
RFFL-212ENST00000584655 C7orf43Q8WVR3 580 aa11.46□□□□□ -0.57
RFFL-212ENST00000584655 ZBTB10Q96DT7 871 aa11.46□□□□□ -0.57
RFFL-212ENST00000584655 CCDC169A6NNP5 214 aa11.46□□□□□ -0.57
RFFL-212ENST00000584655 EML1O00423 815 aa11.46□□□□□ -0.57
RFFL-212ENST00000584655 NPEPPSP55786 919 aa11.46□□□□□ -0.57
RFFL-212ENST00000584655 MUM1L1Q5H9M0 696 aa11.46□□□□□ -0.57
RFFL-212ENST00000584655 CACNA2D4Q7Z3S7 1137 aa11.46□□□□□ -0.57
RFFL-212ENST00000584655 DYDC2Q96IM9 177 aa11.46□□□□□ -0.57
RFFL-212ENST00000584655 SPZ1Q9BXG8 430 aa11.46□□□□□ -0.57
RFFL-212ENST00000584655 MRPL44Q9H9J2 332 aaKnown RBP11.46□□□□□ -0.57
RFFL-212ENST00000584655 GPRC5CQ9NQ84 441 aa11.46□□□□□ -0.57
RFFL-212ENST00000584655 RIPK3Q9Y572 518 aa11.46□□□□□ -0.57
RFFL-212ENST00000584655 NMT1P30419 496 aaKnown RBP11.46□□□□□ -0.58
RFFL-212ENST00000584655 PRELPP51888 382 aa11.46□□□□□ -0.58
RFFL-212ENST00000584655 PLA2G4FQ68DD2 849 aa11.46□□□□□ -0.58
RFFL-212ENST00000584655 KANK3Q6NY19 840 aa11.46□□□□□ -0.58
RFFL-212ENST00000584655 RAB34Q9BZG1 259 aa11.46□□□□□ -0.58
RFFL-212ENST00000584655 AGPAT5Q9NUQ2 364 aa11.46□□□□□ -0.58
RFFL-212ENST00000584655 PANK4Q9NVE7 773 aa11.46□□□□□ -0.58
RFFL-212ENST00000584655 POTEJP0CG39 1038 aa11.45□□□□□ -0.58
RFFL-212ENST00000584655 MAP1SQ66K74 1059 aaPredicted RBP11.45□□□□□ -0.58
RFFL-212ENST00000584655 CDR2LQ86X02 465 aaPredicted RBP11.45□□□□□ -0.58
RFFL-212ENST00000584655 GCOM1H8Y6P7 765 aaPredicted RBP11.45□□□□□ -0.58
RFFL-212ENST00000584655 GTPBP6O43824 516 aaPredicted RBP11.45□□□□□ -0.58
RFFL-212ENST00000584655 POLR2MP0CAP2 368 aa11.45□□□□□ -0.58
RFFL-212ENST00000584655 GRB10Q13322 594 aa11.45□□□□□ -0.58
RFFL-212ENST00000584655 TMEM132AQ24JP5 1023 aa11.45□□□□□ -0.58
RFFL-212ENST00000584655 MNS1Q8NEH6 495 aa11.45□□□□□ -0.58
RFFL-212ENST00000584655 FAM163AQ96GL9 167 aaPredicted RBP11.45□□□□□ -0.58
RFFL-212ENST00000584655 ZNF577Q9BSK1 485 aa11.45□□□□□ -0.58
RFFL-212ENST00000584655 HSD3B7Q9H2F3 369 aa11.45□□□□□ -0.58
RFFL-212ENST00000584655 GOPCQ9HD26 462 aa11.45□□□□□ -0.58
RFFL-212ENST00000584655 ZNF215Q9UL58 517 aaPredicted RBP11.45□□□□□ -0.58
RFFL-212ENST00000584655 LAMA4Q16363 1823 aa11.45□□□□□ -0.58
RFFL-212ENST00000584655 PPP1R3GB7ZBB8 358 aa11.45□□□□□ -0.58
RFFL-212ENST00000584655 CSDE1O75534 798 aaKnown RBP11.45□□□□□ -0.58
RFFL-212ENST00000584655 PLEKP08567 350 aaPredicted RBP11.45□□□□□ -0.58
RFFL-212ENST00000584655 FGRP09769 529 aa11.45□□□□□ -0.58
RFFL-212ENST00000584655 PLA2G4BP0C869 781 aa11.45□□□□□ -0.58
RFFL-212ENST00000584655 MDM2Q00987 491 aaPredicted RBP11.45□□□□□ -0.58
RFFL-212ENST00000584655 SPECC1LQ69YQ0 1117 aa11.45□□□□□ -0.58
RFFL-212ENST00000584655 SNRNP48Q6IEG0 339 aaKnown RBP11.45□□□□□ -0.58
RFFL-212ENST00000584655 TMED8Q6PL24 325 aaPredicted RBP11.45□□□□□ -0.58
RFFL-212ENST00000584655 CYFIP1Q7L576 1253 aa11.45□□□□□ -0.58
RFFL-212ENST00000584655 PROCA1Q8NCQ7 364 aaPredicted RBP11.45□□□□□ -0.58
RFFL-212ENST00000584655 CCDC127Q96BQ5 260 aa11.45□□□□□ -0.58
RFFL-212ENST00000584655 CNOT6LQ96LI5 555 aaKnown RBP11.45□□□□□ -0.58
RFFL-212ENST00000584655 TAAR1Q96RJ0 339 aa11.45□□□□□ -0.58
RFFL-212ENST00000584655 TRIM9Q9C026 710 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms