RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 MYO1BO43795 1136 aa5.6□□□□□ -1.51
VAPA-206ENST00000583475 BUB1BO60566 1050 aaPredicted RBP5.6□□□□□ -1.51
VAPA-206ENST00000583475 MSCO60682 206 aa5.6□□□□□ -1.51
VAPA-206ENST00000583475 ZBTB7AO95365 584 aa5.6□□□□□ -1.51
VAPA-206ENST00000583475 FAM153BP0C7A2 387 aa5.6□□□□□ -1.51
VAPA-206ENST00000583475 ATF2P15336 505 aa5.6□□□□□ -1.51
VAPA-206ENST00000583475 SSRP1Q08945 709 aaKnown RBP5.6□□□□□ -1.51
VAPA-206ENST00000583475 SLC9A5Q14940 896 aa5.6□□□□□ -1.51
VAPA-206ENST00000583475 RSPO2Q6UXX9 243 aaPredicted RBP5.6□□□□□ -1.51
VAPA-206ENST00000583475 AMIGO3Q86WK7 504 aa5.6□□□□□ -1.51
VAPA-206ENST00000583475 RIOX2Q8IUF8 465 aa5.6□□□□□ -1.51
VAPA-206ENST00000583475 TMEM169Q96HH4 297 aa5.6□□□□□ -1.51
VAPA-206ENST00000583475 DEPDC7Q96QD5 511 aa5.6□□□□□ -1.51
VAPA-206ENST00000583475 IRF2BPLQ9H1B7 796 aa5.6□□□□□ -1.51
VAPA-206ENST00000583475 NUDT5Q9UKK9 219 aa5.6□□□□□ -1.51
VAPA-206ENST00000583475 BLACEA4D250 179 aa5.59□□□□□ -1.51
VAPA-206ENST00000583475 H7BY64 318 aa5.59□□□□□ -1.51
VAPA-206ENST00000583475 ASGR2P07307 311 aa5.59□□□□□ -1.51
VAPA-206ENST00000583475 NCAM1P13591 858 aa5.59□□□□□ -1.51
VAPA-206ENST00000583475 PI3P19957 117 aa5.59□□□□□ -1.51
VAPA-206ENST00000583475 TARBP2Q15633 366 aaKnown RBP5.59□□□□□ -1.51
VAPA-206ENST00000583475 ZNF385BQ569K4 471 aa5.59□□□□□ -1.51
VAPA-206ENST00000583475 FAM209AQ5JX71 171 aa5.59□□□□□ -1.51
VAPA-206ENST00000583475 MROH9Q5TGP6 573 aa5.59□□□□□ -1.51
VAPA-206ENST00000583475 CIAPIN1Q6FI81 312 aa5.59□□□□□ -1.51
VAPA-206ENST00000583475 KCNT2Q6UVM3 1135 aa5.59□□□□□ -1.51
VAPA-206ENST00000583475 LCNL1Q6ZST4 164 aa5.59□□□□□ -1.51
VAPA-206ENST00000583475 FAM129CQ86XR2 697 aa5.59□□□□□ -1.51
VAPA-206ENST00000583475 SCUBE1Q8IWY4 988 aa5.59□□□□□ -1.51
VAPA-206ENST00000583475 ZSCAN18Q8TBC5 510 aaPredicted RBP5.59□□□□□ -1.51
VAPA-206ENST00000583475 DCAF4Q8WV16 495 aa5.59□□□□□ -1.51
VAPA-206ENST00000583475 DACT3Q96B18 629 aaPredicted RBP5.59□□□□□ -1.51
VAPA-206ENST00000583475 CHAMP1Q96JM3 812 aa5.59□□□□□ -1.51
VAPA-206ENST00000583475 DNAJC7Q99615 494 aa5.59□□□□□ -1.51
VAPA-206ENST00000583475 PHF20Q9BVI0 1012 aa5.59□□□□□ -1.51
VAPA-206ENST00000583475 KDM2BQ8NHM5 1336 aa5.58□□□□□ -1.52
VAPA-206ENST00000583475 NUAK1O60285 661 aa5.58□□□□□ -1.52
VAPA-206ENST00000583475 PFKLP17858 780 aa5.58□□□□□ -1.52
VAPA-206ENST00000583475 PMLP29590 882 aa5.58□□□□□ -1.52
VAPA-206ENST00000583475 SLC6A11P48066 632 aa5.58□□□□□ -1.52
VAPA-206ENST00000583475 IFRD2Q12894 506 aaPredicted RBP5.58□□□□□ -1.52
VAPA-206ENST00000583475 KRTAP19-4Q3LI73 84 aa5.58□□□□□ -1.52
VAPA-206ENST00000583475 DCP2Q8IU60 420 aaKnown RBP5.58□□□□□ -1.52
VAPA-206ENST00000583475 SIAH1Q8IUQ4 282 aa5.58□□□□□ -1.52
VAPA-206ENST00000583475 ALG3Q92685 438 aa5.58□□□□□ -1.52
VAPA-206ENST00000583475 DRC1Q96MC2 740 aa5.58□□□□□ -1.52
VAPA-206ENST00000583475 SRPK1Q96SB4 655 aaKnown RBP5.58□□□□□ -1.52
VAPA-206ENST00000583475 RNF38Q9H0F5 515 aa5.58□□□□□ -1.52
VAPA-206ENST00000583475 CLDND1Q9NY35 253 aa5.58□□□□□ -1.52
VAPA-206ENST00000583475 ASXL2Q76L83 1435 aa5.57□□□□□ -1.52
VAPA-206ENST00000583475 ZSCAN22P10073 491 aaPredicted RBP5.57□□□□□ -1.52
VAPA-206ENST00000583475 MC3RP41968 323 aa5.57□□□□□ -1.52
VAPA-206ENST00000583475 FOXO4P98177 505 aa5.57□□□□□ -1.52
VAPA-206ENST00000583475 LONRF2Q1L5Z9 754 aa5.57□□□□□ -1.52
VAPA-206ENST00000583475 STYK1Q6J9G0 422 aa5.57□□□□□ -1.52
VAPA-206ENST00000583475 CNKSR3Q6P9H4 555 aa5.57□□□□□ -1.52
VAPA-206ENST00000583475 LBX2Q6XYB7 198 aa5.57□□□□□ -1.52
VAPA-206ENST00000583475 JMYQ8N9B5 988 aa5.57□□□□□ -1.52
VAPA-206ENST00000583475 CPA5Q8WXQ8 436 aa5.57□□□□□ -1.52
VAPA-206ENST00000583475 SEC14L1Q92503 715 aa5.57□□□□□ -1.52
VAPA-206ENST00000583475 CDC6Q99741 560 aa5.57□□□□□ -1.52
VAPA-206ENST00000583475 JAM3Q9BX67 310 aa5.57□□□□□ -1.52
VAPA-206ENST00000583475 PPARGC1AQ9UBK2 798 aaKnown RBP5.57□□□□□ -1.52
VAPA-206ENST00000583475 PALD1Q9ULE6 856 aa5.57□□□□□ -1.52
VAPA-206ENST00000583475 TRBV23-1A0A0A0MS06 115 aa5.56□□□□□ -1.52
VAPA-206ENST00000583475 TADA3O75528 432 aa5.56□□□□□ -1.52
VAPA-206ENST00000583475 C6orf222P0C671 652 aaPredicted RBP5.56□□□□□ -1.52
VAPA-206ENST00000583475 LIMS1P48059 325 aa5.56□□□□□ -1.52
VAPA-206ENST00000583475 GPR85P60893 370 aa5.56□□□□□ -1.52
VAPA-206ENST00000583475 CACNB2Q08289 660 aaPredicted RBP5.56□□□□□ -1.52
VAPA-206ENST00000583475 SPOCD1Q6ZMY3 1216 aa5.56□□□□□ -1.52
VAPA-206ENST00000583475 MILR1Q7Z6M3 343 aa5.56□□□□□ -1.52
VAPA-206ENST00000583475 LILRB2Q8N423 598 aa5.56□□□□□ -1.52
VAPA-206ENST00000583475 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.56□□□□□ -1.52
VAPA-206ENST00000583475 EXOC2Q96KP1 924 aa5.56□□□□□ -1.52
VAPA-206ENST00000583475 PWWP2AQ96N64 755 aa5.56□□□□□ -1.52
VAPA-206ENST00000583475 ZFYVE21Q9BQ24 234 aa5.56□□□□□ -1.52
VAPA-206ENST00000583475 AP5M1Q9H0R1 490 aa5.56□□□□□ -1.52
VAPA-206ENST00000583475 OSBPL2Q9H1P3 480 aa5.56□□□□□ -1.52
VAPA-206ENST00000583475 COA3Q9Y2R0 106 aaPredicted RBP5.56□□□□□ -1.52
VAPA-206ENST00000583475 RFXAPO00287 272 aa5.55□□□□□ -1.52
VAPA-206ENST00000583475 HGSO14964 777 aaPredicted RBP5.55□□□□□ -1.52
VAPA-206ENST00000583475 B3GNT8Q7Z7M8 397 aa5.55□□□□□ -1.52
VAPA-206ENST00000583475 IFNL3Q8IZI9 196 aa5.55□□□□□ -1.52
VAPA-206ENST00000583475 KISS1RQ969F8 398 aaPredicted RBP5.55□□□□□ -1.52
VAPA-206ENST00000583475 DHRS4Q9BTZ2 278 aa5.55□□□□□ -1.52
VAPA-206ENST00000583475 CDK11AQ9UQ88 783 aaPredicted RBP5.55□□□□□ -1.52
VAPA-206ENST00000583475 TRAF6Q9Y4K3 522 aa5.55□□□□□ -1.52
VAPA-206ENST00000583475 DGKIO75912 1065 aa5.54□□□□□ -1.52
VAPA-206ENST00000583475 PLA2G1BP04054 148 aaKnown RBP5.54□□□□□ -1.52
VAPA-206ENST00000583475 AFF3P51826 1226 aaKnown RBP5.54□□□□□ -1.52
VAPA-206ENST00000583475 SUMO1P63165 101 aaKnown RBP5.54□□□□□ -1.52
VAPA-206ENST00000583475 EMC4Q5J8M3 183 aa5.54□□□□□ -1.52
VAPA-206ENST00000583475 TCERG1LQ5VWI1 586 aa5.54□□□□□ -1.52
VAPA-206ENST00000583475 DPH6Q7L8W6 267 aa5.54□□□□□ -1.52
VAPA-206ENST00000583475 MIB1Q86YT6 1006 aa5.54□□□□□ -1.52
VAPA-206ENST00000583475 TMEM151BQ8IW70 566 aa5.54□□□□□ -1.52
VAPA-206ENST00000583475 FNIP1Q8TF40 1166 aa5.54□□□□□ -1.52
VAPA-206ENST00000583475 UBXN4Q92575 508 aa5.54□□□□□ -1.52
VAPA-206ENST00000583475 PTPRN2Q92932 1015 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms