RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 FLRT1Q9NZU1 646 aa10.85□□□□□ -0.67
RFFL-210ENST00000582308 CLIC4Q9Y696 253 aa10.85□□□□□ -0.67
RFFL-210ENST00000582308 LOC102724159A0A0B4J2E5 919 aa10.84□□□□□ -0.67
RFFL-210ENST00000582308 FOXN1O15353 648 aa10.84□□□□□ -0.67
RFFL-210ENST00000582308 SLC37A4O43826 429 aa10.84□□□□□ -0.67
RFFL-210ENST00000582308 CCNT1O60563 726 aaKnown RBP10.84□□□□□ -0.67
RFFL-210ENST00000582308 IGHA2P01877 340 aa10.84□□□□□ -0.67
RFFL-210ENST00000582308 ITGB5P18084 799 aa10.84□□□□□ -0.67
RFFL-210ENST00000582308 MCM7P33993 719 aa10.84□□□□□ -0.67
RFFL-210ENST00000582308 FLT3LGP49771 235 aa10.84□□□□□ -0.67
RFFL-210ENST00000582308 PRKCZQ05513 592 aa10.84□□□□□ -0.67
RFFL-210ENST00000582308 PWP2Q15269 919 aaKnown RBP10.84□□□□□ -0.67
RFFL-210ENST00000582308 CCL14Q16627 93 aa10.84□□□□□ -0.67
RFFL-210ENST00000582308 ANO1Q5XXA6 986 aa10.84□□□□□ -0.67
RFFL-210ENST00000582308 PPP4R3AQ6IN85 833 aa10.84□□□□□ -0.67
RFFL-210ENST00000582308 XRRA1Q6P2D8 792 aa10.84□□□□□ -0.67
RFFL-210ENST00000582308 MOXD1Q6UVY6 613 aa10.84□□□□□ -0.67
RFFL-210ENST00000582308 MAMDC4Q6UXC1 1216 aa10.84□□□□□ -0.67
RFFL-210ENST00000582308 C4orf32Q8N8J7 132 aa10.84□□□□□ -0.67
RFFL-210ENST00000582308 LENG9Q96B70 501 aa10.84□□□□□ -0.67
RFFL-210ENST00000582308 ZNF396Q96N95 335 aaPredicted RBP10.84□□□□□ -0.67
RFFL-210ENST00000582308 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.84□□□□□ -0.67
RFFL-210ENST00000582308 SLC5A4Q9NY91 659 aa10.84□□□□□ -0.67
RFFL-210ENST00000582308 RTEL1Q9NZ71 1219 aa10.84□□□□□ -0.67
RFFL-210ENST00000582308 SRRDQ9UH36 339 aa10.84□□□□□ -0.67
RFFL-210ENST00000582308 ATP6V1DQ9Y5K8 247 aa10.84□□□□□ -0.67
RFFL-210ENST00000582308 UBIAD1Q9Y5Z9 338 aa10.84□□□□□ -0.67
RFFL-210ENST00000582308 IGLV3-22A0A075B6J6 115 aa10.83□□□□□ -0.68
RFFL-210ENST00000582308 ASB14A6NK59 587 aa10.83□□□□□ -0.68
RFFL-210ENST00000582308 MEIS1O00470 390 aa10.83□□□□□ -0.68
RFFL-210ENST00000582308 EIF3JO75822 258 aaKnown RBP10.83□□□□□ -0.68
RFFL-210ENST00000582308 RGS20O76081 388 aa10.83□□□□□ -0.68
RFFL-210ENST00000582308 SNAI1O95863 264 aaPredicted RBP10.83□□□□□ -0.68
RFFL-210ENST00000582308 GNRH1P01148 92 aa10.83□□□□□ -0.68
RFFL-210ENST00000582308 HSPA8P11142 646 aaKnown RBP10.83□□□□□ -0.68
RFFL-210ENST00000582308 XRCC5P13010 732 aaKnown RBP10.83□□□□□ -0.68
RFFL-210ENST00000582308 GCFC2P16383 781 aaKnown RBP10.83□□□□□ -0.68
RFFL-210ENST00000582308 ZNF76P36508 570 aa10.83□□□□□ -0.68
RFFL-210ENST00000582308 NASPP49321 788 aaPredicted RBP10.83□□□□□ -0.68
RFFL-210ENST00000582308 CEBPZQ03701 1054 aaKnown RBP10.83□□□□□ -0.68
RFFL-210ENST00000582308 PDE4DQ08499 809 aa10.83□□□□□ -0.68
RFFL-210ENST00000582308 PTPAQ15257 358 aa10.83□□□□□ -0.68
RFFL-210ENST00000582308 SF3A1Q15459 793 aaKnown RBP10.83□□□□□ -0.68
RFFL-210ENST00000582308 STXBP2Q15833 593 aa10.83□□□□□ -0.68
RFFL-210ENST00000582308 Q4G0T1 1027 aa10.83□□□□□ -0.68
RFFL-210ENST00000582308 CEP55Q53EZ4 464 aa10.83□□□□□ -0.68
RFFL-210ENST00000582308 PRR16Q569H4 304 aa10.83□□□□□ -0.68
RFFL-210ENST00000582308 ATL3Q6DD88 541 aa10.83□□□□□ -0.68
RFFL-210ENST00000582308 ARMCX2Q7L311 632 aa10.83□□□□□ -0.68
RFFL-210ENST00000582308 APBA2Q99767 749 aa10.83□□□□□ -0.68
RFFL-210ENST00000582308 MXRA8Q9BRK3 442 aa10.83□□□□□ -0.68
RFFL-210ENST00000582308 TINF2Q9BSI4 451 aa10.83□□□□□ -0.68
RFFL-210ENST00000582308 WDR11Q9BZH6 1224 aa10.83□□□□□ -0.68
RFFL-210ENST00000582308 TMEM60Q9H2L4 133 aa10.83□□□□□ -0.68
RFFL-210ENST00000582308 JADE2Q9NQC1 790 aa10.83□□□□□ -0.68
RFFL-210ENST00000582308 DDX25Q9UHL0 483 aaKnown RBP10.83□□□□□ -0.68
RFFL-210ENST00000582308 MRVI1Q9Y6F6 885 aa10.83□□□□□ -0.68
RFFL-210ENST00000582308 SYNGAP1Q96PV0 1343 aa10.83□□□□□ -0.68
RFFL-210ENST00000582308 HTTP42858 3142 aa10.82□□□□□ -0.68
RFFL-210ENST00000582308 B4DLN1 442 aa10.82□□□□□ -0.68
RFFL-210ENST00000582308 STAM2O75886 525 aa10.82□□□□□ -0.68
RFFL-210ENST00000582308 BAG4O95429 457 aaKnown RBP10.82□□□□□ -0.68
RFFL-210ENST00000582308 HSPA1AP0DMV8 641 aaKnown RBP10.82□□□□□ -0.68
RFFL-210ENST00000582308 HSPA1BP0DMV9 641 aaKnown RBP10.82□□□□□ -0.68
RFFL-210ENST00000582308 ARP10275 920 aa10.82□□□□□ -0.68
RFFL-210ENST00000582308 HOXD10P28358 340 aa10.82□□□□□ -0.68
RFFL-210ENST00000582308 PTGDRQ13258 359 aa10.82□□□□□ -0.68
RFFL-210ENST00000582308 SEMA3FQ13275 785 aa10.82□□□□□ -0.68
RFFL-210ENST00000582308 IRF5Q13568 498 aa10.82□□□□□ -0.68
RFFL-210ENST00000582308 ARHGEF6Q15052 776 aa10.82□□□□□ -0.68
RFFL-210ENST00000582308 OLFML2BQ68BL8 750 aa10.82□□□□□ -0.68
RFFL-210ENST00000582308 CLEC17AQ6ZS10 378 aa10.82□□□□□ -0.68
RFFL-210ENST00000582308 OTOP1Q7RTM1 612 aa10.82□□□□□ -0.68
RFFL-210ENST00000582308 NIPA1Q7RTP0 329 aa10.82□□□□□ -0.68
RFFL-210ENST00000582308 PLA2G4DQ86XP0 818 aa10.82□□□□□ -0.68
RFFL-210ENST00000582308 POTEDQ86YR6 584 aa10.82□□□□□ -0.68
RFFL-210ENST00000582308 MSL3Q8N5Y2 521 aaKnown RBP10.82□□□□□ -0.68
RFFL-210ENST00000582308 INPP4AQ96PE3 977 aaPredicted RBP10.82□□□□□ -0.68
RFFL-210ENST00000582308 UIMC1Q96RL1 719 aa10.82□□□□□ -0.68
RFFL-210ENST00000582308 MPHOSPH6Q99547 160 aaKnown RBP10.82□□□□□ -0.68
RFFL-210ENST00000582308 NAP1L4Q99733 375 aaKnown RBP10.82□□□□□ -0.68
RFFL-210ENST00000582308 KATNBL1Q9H079 304 aa10.82□□□□□ -0.68
RFFL-210ENST00000582308 POLR3EQ9NVU0 708 aa10.82□□□□□ -0.68
RFFL-210ENST00000582308 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.82□□□□□ -0.68
RFFL-210ENST00000582308 RCOR1Q9UKL0 485 aa10.82□□□□□ -0.68
RFFL-210ENST00000582308 CNPY2Q9Y2B0 182 aa10.82□□□□□ -0.68
RFFL-210ENST00000582308 NEMFO60524 1076 aa10.81□□□□□ -0.68
RFFL-210ENST00000582308 NCLP19338 710 aaKnown RBP10.81□□□□□ -0.68
RFFL-210ENST00000582308 CYP2C19P33261 490 aa10.81□□□□□ -0.68
RFFL-210ENST00000582308 KRT85P78386 507 aa10.81□□□□□ -0.68
RFFL-210ENST00000582308 ATP2C1P98194 919 aaPredicted RBP10.81□□□□□ -0.68
RFFL-210ENST00000582308 ORC2Q13416 577 aaPredicted RBP10.81□□□□□ -0.68
RFFL-210ENST00000582308 SLC39A14Q15043 492 aa10.81□□□□□ -0.68
RFFL-210ENST00000582308 SEPT14Q6ZU15 432 aa10.81□□□□□ -0.68
RFFL-210ENST00000582308 EEPD1Q7L9B9 569 aa10.81□□□□□ -0.68
RFFL-210ENST00000582308 FBXO16Q8IX29 292 aaPredicted RBP10.81□□□□□ -0.68
RFFL-210ENST00000582308 LINC00301Q8NCQ3 95 aa10.81□□□□□ -0.68
RFFL-210ENST00000582308 ETNPPLQ8TBG4 499 aa10.81□□□□□ -0.68
RFFL-210ENST00000582308 LEO1Q8WVC0 666 aaPredicted RBP10.81□□□□□ -0.68
RFFL-210ENST00000582308 TRIB2Q92519 343 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms