RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 OLFML2BQ68BL8 750 aa14.31□□□□□ -0.12
SRSF1-204ENST00000581979 DPP9Q86TI2 863 aa14.31□□□□□ -0.12
SRSF1-204ENST00000581979 FAM160B2Q86V87 743 aa14.31□□□□□ -0.12
SRSF1-204ENST00000581979 FSIP1Q8NA03 581 aa14.31□□□□□ -0.12
SRSF1-204ENST00000581979 MRPS27Q92552 414 aaKnown RBP14.31□□□□□ -0.12
SRSF1-204ENST00000581979 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.31□□□□□ -0.12
SRSF1-204ENST00000581979 PRR12Q9ULL5 1215 aa14.31□□□□□ -0.12
SRSF1-204ENST00000581979 COL11A1P12107 1806 aaPredicted RBP14.31□□□□□ -0.12
SRSF1-204ENST00000581979 SYCE3A1L190 88 aa14.3□□□□□ -0.12
SRSF1-204ENST00000581979 COBLO75128 1261 aa14.3□□□□□ -0.12
SRSF1-204ENST00000581979 BMP15O95972 392 aa14.3□□□□□ -0.12
SRSF1-204ENST00000581979 PLS1Q14651 629 aa14.3□□□□□ -0.12
SRSF1-204ENST00000581979 ZNF174Q15697 407 aa14.3□□□□□ -0.12
SRSF1-204ENST00000581979 KRT25Q7Z3Z0 450 aa14.3□□□□□ -0.12
SRSF1-204ENST00000581979 NCAPG2Q86XI2 1143 aa14.3□□□□□ -0.12
SRSF1-204ENST00000581979 REXO1Q8N1G1 1221 aaKnown RBP14.3□□□□□ -0.12
SRSF1-204ENST00000581979 REPS2Q8NFH8 660 aa14.3□□□□□ -0.12
SRSF1-204ENST00000581979 AMNQ9BXJ7 453 aa14.3□□□□□ -0.12
SRSF1-204ENST00000581979 PRO3102Q9H379 93 aa14.3□□□□□ -0.12
SRSF1-204ENST00000581979 C11orf49Q9H6J7 331 aa14.3□□□□□ -0.12
SRSF1-204ENST00000581979 DACT1Q9NYF0 836 aa14.3□□□□□ -0.12
SRSF1-204ENST00000581979 FEM1BQ9UK73 627 aa14.3□□□□□ -0.12
SRSF1-204ENST00000581979 PCDHA1Q9Y5I3 950 aa14.3□□□□□ -0.12
SRSF1-204ENST00000581979 TRIOBPQ9H2D6 2365 aa14.3□□□□□ -0.12
SRSF1-204ENST00000581979 CUTAO60888 179 aa14.29□□□□□ -0.12
SRSF1-204ENST00000581979 LETM1O95202 739 aaPredicted RBP14.29□□□□□ -0.12
SRSF1-204ENST00000581979 COL6A1P12109 1028 aa14.29□□□□□ -0.12
SRSF1-204ENST00000581979 ZNF445P59923 1031 aa14.29□□□□□ -0.12
SRSF1-204ENST00000581979 NONOQ15233 471 aaKnown RBP eCLIP14.29□□□□□ -0.12
SRSF1-204ENST00000581979 CHRDL2Q6WN34 429 aa14.29□□□□□ -0.12
SRSF1-204ENST00000581979 FBXO11Q86XK2 927 aa14.29□□□□□ -0.12
SRSF1-204ENST00000581979 RIOX2Q8IUF8 465 aa14.29□□□□□ -0.12
SRSF1-204ENST00000581979 KRI1Q8N9T8 703 aaKnown RBP14.29□□□□□ -0.12
SRSF1-204ENST00000581979 CUL5Q93034 780 aa14.29□□□□□ -0.12
SRSF1-204ENST00000581979 KIFC2Q96AC6 838 aa14.29□□□□□ -0.12
SRSF1-204ENST00000581979 GOLPH3LQ9H4A5 285 aa14.29□□□□□ -0.12
SRSF1-204ENST00000581979 RIC8AQ9NPQ8 531 aa14.29□□□□□ -0.12
SRSF1-204ENST00000581979 DDX19AQ9NUU7 478 aaKnown RBP14.29□□□□□ -0.12
SRSF1-204ENST00000581979 SLC5A4Q9NY91 659 aa14.29□□□□□ -0.12
SRSF1-204ENST00000581979 ZNF214Q9UL59 606 aaPredicted RBP14.29□□□□□ -0.12
SRSF1-204ENST00000581979 PFASO15067 1338 aa14.29□□□□□ -0.12
SRSF1-204ENST00000581979 MSCO60682 206 aa14.29□□□□□ -0.12
SRSF1-204ENST00000581979 PLA2G6O60733 806 aa14.29□□□□□ -0.12
SRSF1-204ENST00000581979 NR1I2O75469 434 aa14.29□□□□□ -0.12
SRSF1-204ENST00000581979 FCER1AP12319 257 aa14.29□□□□□ -0.12
SRSF1-204ENST00000581979 CYBAP13498 195 aa14.29□□□□□ -0.12
SRSF1-204ENST00000581979 CYP2C19P33261 490 aa14.29□□□□□ -0.12
SRSF1-204ENST00000581979 STAT3P40763 770 aa14.29□□□□□ -0.12
SRSF1-204ENST00000581979 FXR1P51114 621 aaKnown RBP eCLIP14.29□□□□□ -0.12
SRSF1-204ENST00000581979 MRPL12P52815 198 aaKnown RBP14.29□□□□□ -0.12
SRSF1-204ENST00000581979 INF2Q27J81 1249 aa14.29□□□□□ -0.12
SRSF1-204ENST00000581979 AXDND1Q5T1B0 1012 aaPredicted RBP14.29□□□□□ -0.12
SRSF1-204ENST00000581979 JAKMIP3Q5VZ66 844 aa14.29□□□□□ -0.12
SRSF1-204ENST00000581979 SAMD1Q6SPF0 538 aaPredicted RBP14.29□□□□□ -0.12
SRSF1-204ENST00000581979 SLF1Q9BQI6 1058 aa14.29□□□□□ -0.12
SRSF1-204ENST00000581979 NUP62CLQ9H1M0 184 aa14.29□□□□□ -0.12
SRSF1-204ENST00000581979 DDX20Q9UHI6 824 aaKnown RBP14.29□□□□□ -0.12
SRSF1-204ENST00000581979 FRMPD3Q5JV73 1810 aa14.28□□□□□ -0.12
SRSF1-204ENST00000581979 ZNFX1Q9P2E3 1918 aaKnown RBP14.28□□□□□ -0.12
SRSF1-204ENST00000581979 A0A1B0GVL5 298 aa14.28□□□□□ -0.12
SRSF1-204ENST00000581979 COPB2P35606 906 aa14.28□□□□□ -0.12
SRSF1-204ENST00000581979 FAM160A1Q05DH4 1040 aa14.28□□□□□ -0.12
SRSF1-204ENST00000581979 TRAF1Q13077 416 aa14.28□□□□□ -0.12
SRSF1-204ENST00000581979 USH1GQ495M9 461 aa14.28□□□□□ -0.12
SRSF1-204ENST00000581979 TRPV1Q8NER1 839 aa14.28□□□□□ -0.12
SRSF1-204ENST00000581979 GLT8D2Q9H1C3 349 aa14.28□□□□□ -0.12
SRSF1-204ENST00000581979 PSTPIP2Q9H939 334 aa14.28□□□□□ -0.12
SRSF1-204ENST00000581979 TMEM260Q9NX78 707 aa14.28□□□□□ -0.12
SRSF1-204ENST00000581979 GOLGA6L3A6NEY3 463 aa14.27□□□□□ -0.12
SRSF1-204ENST00000581979 WNT7AO00755 349 aa14.27□□□□□ -0.12
SRSF1-204ENST00000581979 CMA1P23946 247 aa14.27□□□□□ -0.12
SRSF1-204ENST00000581979 MCM7P33993 719 aa14.27□□□□□ -0.12
SRSF1-204ENST00000581979 CCDC174Q6PII3 467 aa14.27□□□□□ -0.12
SRSF1-204ENST00000581979 PRPF38AQ8NAV1 312 aaKnown RBP14.27□□□□□ -0.12
SRSF1-204ENST00000581979 CLIC6Q96NY7 704 aa14.27□□□□□ -0.12
SRSF1-204ENST00000581979 RANBP17Q9H2T7 1088 aaKnown RBP14.27□□□□□ -0.12
SRSF1-204ENST00000581979 FBXO2Q9UK22 296 aaPredicted RBP14.27□□□□□ -0.12
SRSF1-204ENST00000581979 MORC2Q9Y6X9 1032 aaPredicted RBP14.27□□□□□ -0.12
SRSF1-204ENST00000581979 ATP2A1O14983 1001 aa14.27□□□□□ -0.13
SRSF1-204ENST00000581979 KINO60870 393 aaKnown RBP14.27□□□□□ -0.13
SRSF1-204ENST00000581979 UBE2SQ16763 222 aa14.27□□□□□ -0.13
SRSF1-204ENST00000581979 LRSAM1Q6UWE0 723 aa14.27□□□□□ -0.13
SRSF1-204ENST00000581979 MAML3Q96JK9 1138 aa14.27□□□□□ -0.13
SRSF1-204ENST00000581979 TNMDQ9H2S6 317 aa14.27□□□□□ -0.13
SRSF1-204ENST00000581979 CLSTN2Q9H4D0 955 aa14.27□□□□□ -0.13
SRSF1-204ENST00000581979 PCDH10Q9P2E7 1040 aa14.27□□□□□ -0.13
SRSF1-204ENST00000581979 DIS3Q9Y2L1 958 aaKnown RBP14.27□□□□□ -0.13
SRSF1-204ENST00000581979 SRPRBQ9Y5M8 271 aaKnown RBP14.27□□□□□ -0.13
SRSF1-204ENST00000581979 MRVI1Q9Y6F6 885 aa14.27□□□□□ -0.13
SRSF1-204ENST00000581979 PFKFB1P16118 471 aa14.26□□□□□ -0.13
SRSF1-204ENST00000581979 CNGA1P29973 690 aa14.26□□□□□ -0.13
SRSF1-204ENST00000581979 CLK2P49760 499 aaKnown RBP14.26□□□□□ -0.13
SRSF1-204ENST00000581979 NDUFA8P51970 172 aa14.26□□□□□ -0.13
SRSF1-204ENST00000581979 ATP2C1P98194 919 aaPredicted RBP14.26□□□□□ -0.13
SRSF1-204ENST00000581979 PTGDRQ13258 359 aa14.26□□□□□ -0.13
SRSF1-204ENST00000581979 CAMK4Q16566 473 aa14.26□□□□□ -0.13
SRSF1-204ENST00000581979 SHC4Q6S5L8 630 aa14.26□□□□□ -0.13
SRSF1-204ENST00000581979 NEK8Q86SG6 692 aa14.26□□□□□ -0.13
SRSF1-204ENST00000581979 ENGASEQ8NFI3 743 aa14.26□□□□□ -0.13
SRSF1-204ENST00000581979 TBCKQ8TEA7 893 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms