RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 HOMER1Q86YM7 354 aa6.86□□□□□ -1.31
SMCHD1-205ENST00000581383 LZTR1Q8N653 840 aa6.86□□□□□ -1.31
SMCHD1-205ENST00000581383 APPBP2Q92624 585 aa6.86□□□□□ -1.31
SMCHD1-205ENST00000581383 MRGPRX3Q96LB0 322 aa6.86□□□□□ -1.31
SMCHD1-205ENST00000581383 EPB41L4AQ9HCS5 686 aaPredicted RBP6.86□□□□□ -1.31
SMCHD1-205ENST00000581383 RWDD3Q9Y3V2 267 aa6.86□□□□□ -1.31
SMCHD1-205ENST00000581383 ENPP3O14638 875 aa6.85□□□□□ -1.31
SMCHD1-205ENST00000581383 SRGAP3O43295 1099 aa6.85□□□□□ -1.31
SMCHD1-205ENST00000581383 FOXO4P98177 505 aa6.85□□□□□ -1.31
SMCHD1-205ENST00000581383 FOXB2Q5VYV0 432 aa6.85□□□□□ -1.31
SMCHD1-205ENST00000581383 EGFLAMQ63HQ2 1017 aa6.85□□□□□ -1.31
SMCHD1-205ENST00000581383 ZNF662Q6ZS27 426 aa6.85□□□□□ -1.31
SMCHD1-205ENST00000581383 TRIM59Q8IWR1 403 aa6.85□□□□□ -1.31
SMCHD1-205ENST00000581383 CRACR2BQ8N4Y2 399 aaPredicted RBP6.85□□□□□ -1.31
SMCHD1-205ENST00000581383 BTN2A2Q8WVV5 523 aa6.85□□□□□ -1.31
SMCHD1-205ENST00000581383 CDC6Q99741 560 aa6.85□□□□□ -1.31
SMCHD1-205ENST00000581383 AARSD1Q9BTE6 412 aaKnown RBP6.85□□□□□ -1.31
SMCHD1-205ENST00000581383 RXFP1Q9HBX9 757 aa6.85□□□□□ -1.31
SMCHD1-205ENST00000581383 TMEM260Q9NX78 707 aa6.85□□□□□ -1.31
SMCHD1-205ENST00000581383 RTEL1Q9NZ71 1219 aa6.85□□□□□ -1.31
SMCHD1-205ENST00000581383 BACE2Q9Y5Z0 518 aa6.85□□□□□ -1.31
SMCHD1-205ENST00000581383 HCFC2Q9Y5Z7 792 aa6.85□□□□□ -1.31
SMCHD1-205ENST00000581383 TRAV20A0A0B4J274 112 aa6.84□□□□□ -1.31
SMCHD1-205ENST00000581383 NPHP3-ACAD11A0A0J9YXS1 232 aa6.84□□□□□ -1.31
SMCHD1-205ENST00000581383 C2orf71A6NGG8 1288 aa6.84□□□□□ -1.31
SMCHD1-205ENST00000581383 PRODHO43272 600 aa6.84□□□□□ -1.31
SMCHD1-205ENST00000581383 PAMP19021 973 aa6.84□□□□□ -1.31
SMCHD1-205ENST00000581383 CANXP27824 592 aaKnown RBP6.84□□□□□ -1.31
SMCHD1-205ENST00000581383 LONRF2Q1L5Z9 754 aa6.84□□□□□ -1.31
SMCHD1-205ENST00000581383 FAM209AQ5JX71 171 aa6.84□□□□□ -1.31
SMCHD1-205ENST00000581383 GTF2IRD2BQ6EKJ0 949 aa6.84□□□□□ -1.31
SMCHD1-205ENST00000581383 GTF2IRD2Q86UP8 949 aa6.84□□□□□ -1.31
SMCHD1-205ENST00000581383 CPNE8Q86YQ8 564 aa6.84□□□□□ -1.31
SMCHD1-205ENST00000581383 ZSWIM2Q8NEG5 633 aa6.84□□□□□ -1.31
SMCHD1-205ENST00000581383 XYLT2Q9H1B5 865 aa6.84□□□□□ -1.31
SMCHD1-205ENST00000581383 LUC7LQ9NQ29 371 aaKnown RBP6.84□□□□□ -1.31
SMCHD1-205ENST00000581383 TRBV23OR9-2A0A075B6M9 112 aa6.83□□□□□ -1.32
SMCHD1-205ENST00000581383 CLSTN1O94985 981 aa6.83□□□□□ -1.32
SMCHD1-205ENST00000581383 PLP2Q04941 152 aa6.83□□□□□ -1.32
SMCHD1-205ENST00000581383 SF1Q15637 639 aaKnown RBP6.83□□□□□ -1.32
SMCHD1-205ENST00000581383 RCSD1Q6JBY9 416 aa6.83□□□□□ -1.32
SMCHD1-205ENST00000581383 PRRT2Q7Z6L0 340 aaPredicted RBP6.83□□□□□ -1.32
SMCHD1-205ENST00000581383 PEX11GQ96HA9 241 aa6.83□□□□□ -1.32
SMCHD1-205ENST00000581383 IPO9Q96P70 1041 aaKnown RBP6.83□□□□□ -1.32
SMCHD1-205ENST00000581383 IER2Q9BTL4 223 aa6.83□□□□□ -1.32
SMCHD1-205ENST00000581383 ADAM7Q9H2U9 754 aa6.83□□□□□ -1.32
SMCHD1-205ENST00000581383 SBNO2Q9Y2G9 1366 aa6.82□□□□□ -1.32
SMCHD1-205ENST00000581383 AURKAO14965 403 aa6.82□□□□□ -1.32
SMCHD1-205ENST00000581383 PPP1R12AO14974 1030 aaPredicted RBP6.82□□□□□ -1.32
SMCHD1-205ENST00000581383 NPHS1O60500 1241 aa6.82□□□□□ -1.32
SMCHD1-205ENST00000581383 ASMTLO95671 621 aa6.82□□□□□ -1.32
SMCHD1-205ENST00000581383 CAPNS1P04632 268 aa6.82□□□□□ -1.32
SMCHD1-205ENST00000581383 PABPC1P11940 636 aaKnown RBP6.82□□□□□ -1.32
SMCHD1-205ENST00000581383 KCNJ6P48051 423 aa6.82□□□□□ -1.32
SMCHD1-205ENST00000581383 RBM10P98175 930 aaKnown RBP6.82□□□□□ -1.32
SMCHD1-205ENST00000581383 GRB10Q13322 594 aa6.82□□□□□ -1.32
SMCHD1-205ENST00000581383 NSMFQ6X4W1 530 aa6.82□□□□□ -1.32
SMCHD1-205ENST00000581383 C16orf86Q6ZW13 317 aa6.82□□□□□ -1.32
SMCHD1-205ENST00000581383 SCUBE1Q8IWY4 988 aa6.82□□□□□ -1.32
SMCHD1-205ENST00000581383 CXorf38Q8TB03 319 aa6.82□□□□□ -1.32
SMCHD1-205ENST00000581383 EXOC2Q96KP1 924 aa6.82□□□□□ -1.32
SMCHD1-205ENST00000581383 DHRS4Q9BTZ2 278 aa6.82□□□□□ -1.32
SMCHD1-205ENST00000581383 RNF38Q9H0F5 515 aa6.82□□□□□ -1.32
SMCHD1-205ENST00000581383 NKX2-4Q9H2Z4 354 aa6.82□□□□□ -1.32
SMCHD1-205ENST00000581383 BTG4Q9NY30 223 aa6.82□□□□□ -1.32
SMCHD1-205ENST00000581383 GULP1Q9UBP9 304 aa6.82□□□□□ -1.32
SMCHD1-205ENST00000581383 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.82□□□□□ -1.32
SMCHD1-205ENST00000581383 TRBV23-1A0A0A0MS06 115 aa6.81□□□□□ -1.32
SMCHD1-205ENST00000581383 SNRPB2P08579 225 aaKnown RBP6.81□□□□□ -1.32
SMCHD1-205ENST00000581383 FGFR1P11362 822 aa6.81□□□□□ -1.32
SMCHD1-205ENST00000581383 CEBPAP49715 358 aaPredicted RBP6.81□□□□□ -1.32
SMCHD1-205ENST00000581383 TKFCQ3LXA3 575 aa6.81□□□□□ -1.32
SMCHD1-205ENST00000581383 ZC3H12BQ5HYM0 836 aaKnown RBP6.81□□□□□ -1.32
SMCHD1-205ENST00000581383 UBXN11Q5T124 520 aa6.81□□□□□ -1.32
SMCHD1-205ENST00000581383 NLGN2Q8NFZ4 835 aa6.81□□□□□ -1.32
SMCHD1-205ENST00000581383 OSBP2Q969R2 916 aa6.81□□□□□ -1.32
SMCHD1-205ENST00000581383 MCMBPQ9BTE3 642 aa6.81□□□□□ -1.32
SMCHD1-205ENST00000581383 BDH2Q9BUT1 245 aa6.81□□□□□ -1.32
SMCHD1-205ENST00000581383 BCAS3Q9H6U6 928 aa6.81□□□□□ -1.32
SMCHD1-205ENST00000581383 CYP26B1Q9NR63 512 aa6.81□□□□□ -1.32
SMCHD1-205ENST00000581383 IRS2Q9Y4H2 1338 aa6.8□□□□□ -1.32
SMCHD1-205ENST00000581383 ADAMTS20P59510 1910 aa6.8□□□□□ -1.32
SMCHD1-205ENST00000581383 DLX3O60479 287 aa6.8□□□□□ -1.32
SMCHD1-205ENST00000581383 FUCA1P04066 466 aa6.8□□□□□ -1.32
SMCHD1-205ENST00000581383 HOXC12P31275 282 aa6.8□□□□□ -1.32
SMCHD1-205ENST00000581383 MC3RP41968 323 aa6.8□□□□□ -1.32
SMCHD1-205ENST00000581383 ECI1P42126 302 aa6.8□□□□□ -1.32
SMCHD1-205ENST00000581383 SLURP1P55000 103 aa6.8□□□□□ -1.32
SMCHD1-205ENST00000581383 PLEKHG4Q58EX7 1191 aa6.8□□□□□ -1.32
SMCHD1-205ENST00000581383 NT5DC1Q5TFE4 455 aa6.8□□□□□ -1.32
SMCHD1-205ENST00000581383 ADGRG2Q8IZP9 1017 aa6.8□□□□□ -1.32
SMCHD1-205ENST00000581383 KISS1RQ969F8 398 aaPredicted RBP6.8□□□□□ -1.32
SMCHD1-205ENST00000581383 DDX11Q96FC9 970 aa6.8□□□□□ -1.32
SMCHD1-205ENST00000581383 CCDC140Q96MF4 163 aa6.8□□□□□ -1.32
SMCHD1-205ENST00000581383 TEPSINQ96N21 525 aa6.8□□□□□ -1.32
SMCHD1-205ENST00000581383 MRPS23Q9Y3D9 190 aaKnown RBP6.8□□□□□ -1.32
SMCHD1-205ENST00000581383 FFAR3O14843 346 aa6.79□□□□□ -1.32
SMCHD1-205ENST00000581383 ZBTB7AO95365 584 aa6.79□□□□□ -1.32
SMCHD1-205ENST00000581383 ASGR2P07307 311 aa6.79□□□□□ -1.32
SMCHD1-205ENST00000581383 ATF2P15336 505 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms