RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 GRIN3BO60391 1043 aa16.68■□□□□ 0.26
CDK5RAP3-218ENST00000580391 PTMAP06454 111 aaKnown RBP16.68■□□□□ 0.26
CDK5RAP3-218ENST00000580391 CD44P16070 742 aaKnown RBP16.68■□□□□ 0.26
CDK5RAP3-218ENST00000580391 ZNF76P36508 570 aa16.68■□□□□ 0.26
CDK5RAP3-218ENST00000580391 IREB2P48200 963 aaKnown RBP16.68■□□□□ 0.26
CDK5RAP3-218ENST00000580391 SPIRE1Q08AE8 756 aa16.68■□□□□ 0.26
CDK5RAP3-218ENST00000580391 ECM1Q16610 540 aa16.68■□□□□ 0.26
CDK5RAP3-218ENST00000580391 TMEM119Q4V9L6 283 aa16.68■□□□□ 0.26
CDK5RAP3-218ENST00000580391 SLFN12Q8IYM2 578 aa16.68■□□□□ 0.26
CDK5RAP3-218ENST00000580391 CDK5RAP3Q96JB5 506 aa16.68■□□□□ 0.26
CDK5RAP3-218ENST00000580391 ZFP91Q96JP5 570 aaPredicted RBP16.68■□□□□ 0.26
CDK5RAP3-218ENST00000580391 CLMNQ96JQ2 1002 aa16.68■□□□□ 0.26
CDK5RAP3-218ENST00000580391 EHMT1Q9H9B1 1298 aa16.68■□□□□ 0.26
CDK5RAP3-218ENST00000580391 ELP3Q9H9T3 547 aa16.68■□□□□ 0.26
CDK5RAP3-218ENST00000580391 DACH1Q9UI36 760 aa16.68■□□□□ 0.26
CDK5RAP3-218ENST00000580391 TBX3O15119 743 aa16.67■□□□□ 0.26
CDK5RAP3-218ENST00000580391 DSG3P32926 999 aa16.67■□□□□ 0.26
CDK5RAP3-218ENST00000580391 GHRHRQ02643 423 aa16.67■□□□□ 0.26
CDK5RAP3-218ENST00000580391 SH3D19Q5HYK7 790 aa16.67■□□□□ 0.26
CDK5RAP3-218ENST00000580391 CATSPERGQ6ZRH7 1159 aa16.67■□□□□ 0.26
CDK5RAP3-218ENST00000580391 KCNK18Q7Z418 384 aa16.67■□□□□ 0.26
CDK5RAP3-218ENST00000580391 SPC24Q8NBT2 197 aa16.67■□□□□ 0.26
CDK5RAP3-218ENST00000580391 KLRC4O43908 158 aa16.66■□□□□ 0.26
CDK5RAP3-218ENST00000580391 DHX8Q14562 1220 aaKnown RBP16.66■□□□□ 0.26
CDK5RAP3-218ENST00000580391 SLC30A10Q6XR72 485 aa16.66■□□□□ 0.26
CDK5RAP3-218ENST00000580391 MED15Q96RN5 788 aa16.66■□□□□ 0.26
CDK5RAP3-218ENST00000580391 STK17AQ9UEE5 414 aa16.66■□□□□ 0.26
CDK5RAP3-218ENST00000580391 RIPK3Q9Y572 518 aa16.66■□□□□ 0.26
CDK5RAP3-218ENST00000580391 RPTORQ8N122 1335 aa16.66■□□□□ 0.26
CDK5RAP3-218ENST00000580391 IQCA1LA6NCM1 817 aa16.66■□□□□ 0.26
CDK5RAP3-218ENST00000580391 FDX1P10109 184 aa16.66■□□□□ 0.26
CDK5RAP3-218ENST00000580391 ATP1A3P13637 1013 aa16.66■□□□□ 0.26
CDK5RAP3-218ENST00000580391 NF2P35240 595 aa16.66■□□□□ 0.26
CDK5RAP3-218ENST00000580391 MCM6Q14566 821 aa16.66■□□□□ 0.26
CDK5RAP3-218ENST00000580391 KLHL10Q6JEL2 608 aa16.66■□□□□ 0.26
CDK5RAP3-218ENST00000580391 MCF2L2Q86YR7 1114 aa16.66■□□□□ 0.26
CDK5RAP3-218ENST00000580391 IL31RAQ8NI17 732 aa16.66■□□□□ 0.26
CDK5RAP3-218ENST00000580391 LARP4BQ92615 738 aaKnown RBP16.66■□□□□ 0.26
CDK5RAP3-218ENST00000580391 TRERF1Q96PN7 1200 aa16.66■□□□□ 0.26
CDK5RAP3-218ENST00000580391 TRIM9Q9C026 710 aa16.66■□□□□ 0.26
CDK5RAP3-218ENST00000580391 RNF146Q9NTX7 359 aa16.66■□□□□ 0.26
CDK5RAP3-218ENST00000580391 ZNF214Q9UL59 606 aaPredicted RBP16.66■□□□□ 0.26
CDK5RAP3-218ENST00000580391 ADAMTS5Q9UNA0 930 aa16.66■□□□□ 0.26
CDK5RAP3-218ENST00000580391 KIAA1217Q5T5P2 1943 aa16.65■□□□□ 0.26
CDK5RAP3-218ENST00000580391 SPDYE16A6NNV3 312 aaPredicted RBP16.65■□□□□ 0.26
CDK5RAP3-218ENST00000580391 MYL1P05976 194 aa16.65■□□□□ 0.26
CDK5RAP3-218ENST00000580391 POTEIP0CG38 1075 aa16.65■□□□□ 0.26
CDK5RAP3-218ENST00000580391 POTEJP0CG39 1038 aa16.65■□□□□ 0.26
CDK5RAP3-218ENST00000580391 CCT6AP40227 531 aaKnown RBP16.65■□□□□ 0.26
CDK5RAP3-218ENST00000580391 TPM4P67936 248 aa16.65■□□□□ 0.26
CDK5RAP3-218ENST00000580391 TTLL12Q14166 644 aaPredicted RBP16.65■□□□□ 0.26
CDK5RAP3-218ENST00000580391 COG2Q14746 738 aa16.65■□□□□ 0.26
CDK5RAP3-218ENST00000580391 TREML2Q5T2D2 321 aa16.65■□□□□ 0.26
CDK5RAP3-218ENST00000580391 NCAPH2Q6IBW4 605 aa16.65■□□□□ 0.26
CDK5RAP3-218ENST00000580391 SNRNP48Q6IEG0 339 aaKnown RBP16.65■□□□□ 0.26
CDK5RAP3-218ENST00000580391 RBM46Q8TBY0 533 aaKnown RBP16.65■□□□□ 0.26
CDK5RAP3-218ENST00000580391 SYTL5Q8TDW5 730 aaPredicted RBP16.65■□□□□ 0.26
CDK5RAP3-218ENST00000580391 OTUD5Q96G74 571 aa16.65■□□□□ 0.26
CDK5RAP3-218ENST00000580391 FAM20AQ96MK3 541 aa16.65■□□□□ 0.26
CDK5RAP3-218ENST00000580391 RMND1Q9NWS8 449 aa16.65■□□□□ 0.26
CDK5RAP3-218ENST00000580391 VAV3Q9UKW4 847 aa16.65■□□□□ 0.26
CDK5RAP3-218ENST00000580391 GDAQ9Y2T3 454 aa16.65■□□□□ 0.26
CDK5RAP3-218ENST00000580391 POTEB3A0JP26 581 aa16.64■□□□□ 0.25
CDK5RAP3-218ENST00000580391 PPP1R3GB7ZBB8 358 aa16.64■□□□□ 0.25
CDK5RAP3-218ENST00000580391 RPS6P62753 249 aaKnown RBP16.64■□□□□ 0.25
CDK5RAP3-218ENST00000580391 KMT5BQ4FZB7 885 aa16.64■□□□□ 0.25
CDK5RAP3-218ENST00000580391 HS1BP3Q53T59 392 aa16.64■□□□□ 0.25
CDK5RAP3-218ENST00000580391 HYIQ5T013 277 aa16.64■□□□□ 0.25
CDK5RAP3-218ENST00000580391 POTEBQ6S5H4 581 aa16.64■□□□□ 0.25
CDK5RAP3-218ENST00000580391 RAD54LQ92698 747 aa16.64■□□□□ 0.25
CDK5RAP3-218ENST00000580391 SYNRGQ9UMZ2 1314 aa16.64■□□□□ 0.25
CDK5RAP3-218ENST00000580391 KDM3AQ9Y4C1 1321 aa16.64■□□□□ 0.25
CDK5RAP3-218ENST00000580391 IRF6O14896 467 aa16.64■□□□□ 0.25
CDK5RAP3-218ENST00000580391 MED24O75448 989 aa16.64■□□□□ 0.25
CDK5RAP3-218ENST00000580391 ASIC1P78348 528 aa16.64■□□□□ 0.25
CDK5RAP3-218ENST00000580391 TMEM132BQ14DG7 1078 aa16.64■□□□□ 0.25
CDK5RAP3-218ENST00000580391 CEP55Q53EZ4 464 aa16.64■□□□□ 0.25
CDK5RAP3-218ENST00000580391 ZNF658Q5TYW1 1059 aaPredicted RBP16.64■□□□□ 0.25
CDK5RAP3-218ENST00000580391 NSMFQ6X4W1 530 aa16.64■□□□□ 0.25
CDK5RAP3-218ENST00000580391 ANKRD13AQ8IZ07 590 aa16.64■□□□□ 0.25
CDK5RAP3-218ENST00000580391 FANCLQ9NW38 375 aa16.64■□□□□ 0.25
CDK5RAP3-218ENST00000580391 NFE2L3Q9Y4A8 694 aa16.64■□□□□ 0.25
CDK5RAP3-218ENST00000580391 ERCC5P28715 1186 aaPredicted RBP16.63■□□□□ 0.25
CDK5RAP3-218ENST00000580391 STX17P56962 302 aa16.63■□□□□ 0.25
CDK5RAP3-218ENST00000580391 KCNB1Q14721 858 aa16.63■□□□□ 0.25
CDK5RAP3-218ENST00000580391 HSP90AA4PQ58FG1 418 aa16.63■□□□□ 0.25
CDK5RAP3-218ENST00000580391 SV2BQ7L1I2 683 aa16.63■□□□□ 0.25
CDK5RAP3-218ENST00000580391 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.63■□□□□ 0.25
CDK5RAP3-218ENST00000580391 ENOX1Q8TC92 643 aaKnown RBP16.63■□□□□ 0.25
CDK5RAP3-218ENST00000580391 MRFAP1L1Q96HT8 127 aa16.63■□□□□ 0.25
CDK5RAP3-218ENST00000580391 C7orf25Q9BPX7 421 aa16.63■□□□□ 0.25
CDK5RAP3-218ENST00000580391 PNMA2Q9UL42 364 aa16.63■□□□□ 0.25
CDK5RAP3-218ENST00000580391 CTNND2Q9UQB3 1225 aa16.63■□□□□ 0.25
CDK5RAP3-218ENST00000580391 FRMPD4Q14CM0 1322 aa16.63■□□□□ 0.25
CDK5RAP3-218ENST00000580391 MYPNQ86TC9 1320 aa16.62■□□□□ 0.25
CDK5RAP3-218ENST00000580391 MYMKA6NI61 221 aa16.62■□□□□ 0.25
CDK5RAP3-218ENST00000580391 SPDYE5A6NIY4 337 aa16.62■□□□□ 0.25
CDK5RAP3-218ENST00000580391 CDC25BP30305 580 aa16.62■□□□□ 0.25
CDK5RAP3-218ENST00000580391 OAZ1P54368 228 aa16.62■□□□□ 0.25
CDK5RAP3-218ENST00000580391 GADL1Q6ZQY3 521 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms