RNA–Protein interactions for RNA: ENST00000580299.1

CTC1-207, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 5

Gene CTC1, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-207ENST00000580299 C2CD4DB7Z1M9 353 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 H7C1W4 665 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 CAPN9O14815 690 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 PPP1R37O75864 691 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 FLOT1O75955 427 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 UPP2O95045 317 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 GDF11O95390 407 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 SNAI1O95863 264 aaPredicted RBP2.94□□□□□ -1.94
CTC1-207ENST00000580299 CXCL10P02778 98 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 HLA-DOAP06340 250 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 SLURP2P0DP57 97 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 NPR3P17342 541 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 HOXB8P17481 243 aaPredicted RBP2.94□□□□□ -1.94
CTC1-207ENST00000580299 PRDX5P30044 214 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 RDXP35241 583 aaKnown RBP2.94□□□□□ -1.94
CTC1-207ENST00000580299 BMPR1AP36894 532 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 BTDP43251 543 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 MAGEA9P43362 315 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 CCR10P46092 362 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 CPT1AP50416 773 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 NOVA1P51513 510 aaKnown RBP2.94□□□□□ -1.94
CTC1-207ENST00000580299 NRLP54845 237 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 CSTF1Q05048 431 aaKnown RBP2.94□□□□□ -1.94
CTC1-207ENST00000580299 SRSF1Q07955 248 aaKnown RBP eCLIP2.94□□□□□ -1.94
CTC1-207ENST00000580299 PPP2R5DQ14738 602 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 RAB3GAP1Q15042 981 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 NAALADL2Q58DX5 795 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 METTL24Q5JXM2 366 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 SPTY2D1Q68D10 685 aaPredicted RBP2.94□□□□□ -1.94
CTC1-207ENST00000580299 SNRNP48Q6IEG0 339 aaKnown RBP2.94□□□□□ -1.94
CTC1-207ENST00000580299 PSAPL1Q6NUJ1 521 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 XRRA1Q6P2D8 792 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 NFRKBQ6P4R8 1299 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.94□□□□□ -1.94
CTC1-207ENST00000580299 RBM23Q86U06 439 aaKnown RBP2.94□□□□□ -1.94
CTC1-207ENST00000580299 PROSER1Q86XN7 944 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 RIOX2Q8IUF8 465 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 IL17RAQ96F46 866 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 LRIG1Q96JA1 1093 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 BBC3Q96PG8 261 aaPredicted RBP2.94□□□□□ -1.94
CTC1-207ENST00000580299 SCNM1Q9BWG6 230 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 BCO2Q9BYV7 579 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 IFIH1Q9BYX4 1025 aaKnown RBP2.94□□□□□ -1.94
CTC1-207ENST00000580299 SMOC2Q9H3U7 446 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 BCAS3Q9H6U6 928 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 TBC1D17Q9HA65 648 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 CABP5Q9NP86 173 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 DDX4Q9NQI0 724 aaKnown RBP2.94□□□□□ -1.94
CTC1-207ENST00000580299 CYP26B1Q9NR63 512 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 NEUROG3Q9Y4Z2 214 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 FREM2Q5SZK8 3169 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 GRIN2DO15399 1336 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 ADGRA3Q8IWK6 1321 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 MYH4Q9Y623 1939 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 SEMA3EO15041 775 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 WDR46O15213 610 aaKnown RBP2.93□□□□□ -1.94
CTC1-207ENST00000580299 CTAGE5O15320 804 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 DYNC1LI2O43237 492 aaPredicted RBP2.93□□□□□ -1.94
CTC1-207ENST00000580299 ADCY6O43306 1168 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 KPNA6O60684 536 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 LGR5O75473 907 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 GLP2RO95838 553 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 GH2P01242 217 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 IGKV5-2P06315 115 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 DCNP07585 359 aaKnown RBP2.93□□□□□ -1.94
CTC1-207ENST00000580299 LDHCP07864 332 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 MMP3P08254 477 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 MYL3P08590 195 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 SPINK2P20155 84 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 TGM1P22735 817 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 TECP42680 631 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 GSTO1P78417 241 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 ITIH3Q06033 890 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 PUM3Q15397 648 aaKnown RBP2.93□□□□□ -1.94
CTC1-207ENST00000580299 PTGISQ16647 500 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 CWF19L2Q2TBE0 894 aaKnown RBP2.93□□□□□ -1.94
CTC1-207ENST00000580299 PDE12Q6L8Q7 609 aaKnown RBP2.93□□□□□ -1.94
CTC1-207ENST00000580299 PHLDB3Q6NSJ2 640 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 ANKRD54Q6NXT1 300 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 KSR2Q6VAB6 950 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 ARMCX2Q7L311 632 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 ADGRD2Q7Z7M1 963 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 FOXP4Q8IVH2 680 aaPredicted RBP2.93□□□□□ -1.94
CTC1-207ENST00000580299 TEX11Q8IYF3 940 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 CELF5Q8N6W0 485 aaKnown RBP2.93□□□□□ -1.94
CTC1-207ENST00000580299 ZBTB44Q8NCP5 570 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 MICAL1Q8TDZ2 1067 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 CASP10Q92851 521 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 P2RX5Q93086 422 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 SHDQ96IW2 340 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 ZNF594Q96JF6 807 aaPredicted RBP2.93□□□□□ -1.94
CTC1-207ENST00000580299 GPR20Q99678 358 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 MYL10Q9BUA6 226 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 SH2D4AQ9H788 454 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 PHAXQ9H814 394 aaKnown RBP2.93□□□□□ -1.94
CTC1-207ENST00000580299 WNT16Q9UBV4 365 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 LIMD1Q9UGP4 676 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 DBR1Q9UK59 544 aaKnown RBP2.93□□□□□ -1.94
CTC1-207ENST00000580299 DENND2AQ9ULE3 1009 aa2.93□□□□□ -1.94
CTC1-207ENST00000580299 CA14Q9ULX7 337 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms