RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 JARID2Q92833 1246 aaPredicted RBP4.25□□□□□ -1.73
KPNB1-208ENST00000580019 TMX1Q9H3N1 280 aa4.25□□□□□ -1.73
KPNB1-208ENST00000580019 DDX41Q9UJV9 622 aaKnown RBP4.25□□□□□ -1.73
KPNB1-208ENST00000580019 NUDT5Q9UKK9 219 aa4.25□□□□□ -1.73
KPNB1-208ENST00000580019 PPP1R12AO14974 1030 aaPredicted RBP4.24□□□□□ -1.73
KPNB1-208ENST00000580019 ONECUT2O95948 504 aa4.24□□□□□ -1.73
KPNB1-208ENST00000580019 CYP1A1P04798 512 aaPredicted RBP4.24□□□□□ -1.73
KPNB1-208ENST00000580019 C8BP07358 591 aa4.24□□□□□ -1.73
KPNB1-208ENST00000580019 ADH4P08319 380 aa4.24□□□□□ -1.73
KPNB1-208ENST00000580019 GLI4P10075 376 aa4.24□□□□□ -1.73
KPNB1-208ENST00000580019 GNA15P30679 374 aa4.24□□□□□ -1.73
KPNB1-208ENST00000580019 CTSKP43235 329 aa4.24□□□□□ -1.73
KPNB1-208ENST00000580019 CCDC85BQ15834 202 aaPredicted RBP4.24□□□□□ -1.73
KPNB1-208ENST00000580019 PRR31Q5SQ13 230 aa4.24□□□□□ -1.73
KPNB1-208ENST00000580019 NBPF6Q5VWK0 638 aa4.24□□□□□ -1.73
KPNB1-208ENST00000580019 CYP2R1Q6VVX0 501 aa4.24□□□□□ -1.73
KPNB1-208ENST00000580019 CABP7Q86V35 215 aa4.24□□□□□ -1.73
KPNB1-208ENST00000580019 PEX11GQ96HA9 241 aa4.24□□□□□ -1.73
KPNB1-208ENST00000580019 NBPF4Q96M43 638 aa4.24□□□□□ -1.73
KPNB1-208ENST00000580019 PTPN18Q99952 460 aa4.24□□□□□ -1.73
KPNB1-208ENST00000580019 KLHL42Q9P2K6 505 aa4.24□□□□□ -1.73
KPNB1-208ENST00000580019 WWC3Q9ULE0 1092 aa4.24□□□□□ -1.73
KPNB1-208ENST00000580019 ERCC6Q03468 1493 aa4.24□□□□□ -1.73
KPNB1-208ENST00000580019 ZBTB7AO95365 584 aa4.23□□□□□ -1.73
KPNB1-208ENST00000580019 LIG3P49916 1009 aa4.23□□□□□ -1.73
KPNB1-208ENST00000580019 RTP2Q5QGT7 225 aa4.23□□□□□ -1.73
KPNB1-208ENST00000580019 PKN3Q6P5Z2 889 aa4.23□□□□□ -1.73
KPNB1-208ENST00000580019 HS2ST1Q7LGA3 356 aa4.23□□□□□ -1.73
KPNB1-208ENST00000580019 FILIP1Q7Z7B0 1213 aa4.23□□□□□ -1.73
KPNB1-208ENST00000580019 JAZF1Q86VZ6 243 aa4.23□□□□□ -1.73
KPNB1-208ENST00000580019 TICAM2Q86XR7 235 aa4.23□□□□□ -1.73
KPNB1-208ENST00000580019 MCF2L2Q86YR7 1114 aa4.23□□□□□ -1.73
KPNB1-208ENST00000580019 NLGN2Q8NFZ4 835 aa4.23□□□□□ -1.73
KPNB1-208ENST00000580019 MORC4Q8TE76 937 aa4.23□□□□□ -1.73
KPNB1-208ENST00000580019 MKL1Q969V6 931 aa4.23□□□□□ -1.73
KPNB1-208ENST00000580019 MBD6Q96DN6 1003 aa4.23□□□□□ -1.73
KPNB1-208ENST00000580019 ADOQ96SZ5 270 aa4.23□□□□□ -1.73
KPNB1-208ENST00000580019 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.23□□□□□ -1.735e-9■□□□□ 8.6
KPNB1-208ENST00000580019 C12orf49Q9H741 205 aa4.23□□□□□ -1.73
KPNB1-208ENST00000580019 SPC25Q9HBM1 224 aa4.23□□□□□ -1.73
KPNB1-208ENST00000580019 RXFP1Q9HBX9 757 aa4.23□□□□□ -1.73
KPNB1-208ENST00000580019 IFT57Q9NWB7 429 aa4.23□□□□□ -1.73
KPNB1-208ENST00000580019 SLC52A1Q9NWF4 448 aa4.23□□□□□ -1.73
KPNB1-208ENST00000580019 COL4A3BPQ9Y5P4 624 aa4.23□□□□□ -1.73
KPNB1-208ENST00000580019 AK5Q9Y6K8 562 aa4.23□□□□□ -1.73
KPNB1-208ENST00000580019 EIF4G1Q04637 1599 aaKnown RBP4.23□□□□□ -1.73
KPNB1-208ENST00000580019 PRR36Q9H6K5 1346 aa4.22□□□□□ -1.73
KPNB1-208ENST00000580019 DNAJC6O75061 913 aa4.22□□□□□ -1.73
KPNB1-208ENST00000580019 UBOX5O94941 541 aa4.22□□□□□ -1.73
KPNB1-208ENST00000580019 PARNO95453 639 aaKnown RBP4.22□□□□□ -1.73
KPNB1-208ENST00000580019 BPNT1O95861 308 aa4.22□□□□□ -1.73
KPNB1-208ENST00000580019 TFE3P19532 575 aaPredicted RBP4.22□□□□□ -1.73
KPNB1-208ENST00000580019 DGCR2P98153 550 aa4.22□□□□□ -1.73
KPNB1-208ENST00000580019 ZKSCAN2Q63HK3 967 aa4.22□□□□□ -1.73
KPNB1-208ENST00000580019 CRTC3Q6UUV7 619 aa4.22□□□□□ -1.73
KPNB1-208ENST00000580019 PCSK4Q6UW60 755 aa4.22□□□□□ -1.73
KPNB1-208ENST00000580019 EXOC8Q8IYI6 725 aa4.22□□□□□ -1.73
KPNB1-208ENST00000580019 SLKQ9H2G2 1235 aaPredicted RBP4.22□□□□□ -1.73
KPNB1-208ENST00000580019 RNF19AQ9NV58 838 aa4.22□□□□□ -1.73
KPNB1-208ENST00000580019 CHPF2Q9P2E5 772 aa4.22□□□□□ -1.73
KPNB1-208ENST00000580019 PRKAB1Q9Y478 270 aa4.22□□□□□ -1.73
KPNB1-208ENST00000580019 MRPL42Q9Y6G3 142 aaKnown RBP4.22□□□□□ -1.73
KPNB1-208ENST00000580019 ENPP3O14638 875 aa4.21□□□□□ -1.74
KPNB1-208ENST00000580019 GSTM1P09488 218 aa4.21□□□□□ -1.74
KPNB1-208ENST00000580019 FGRP09769 529 aa4.21□□□□□ -1.74
KPNB1-208ENST00000580019 ATF4P18848 351 aaPredicted RBP4.21□□□□□ -1.74
KPNB1-208ENST00000580019 RACK1P63244 317 aaKnown RBP4.21□□□□□ -1.74
KPNB1-208ENST00000580019 ZNF394Q53GI3 561 aa4.21□□□□□ -1.74
KPNB1-208ENST00000580019 CCAR1Q8IX12 1150 aaKnown RBP4.21□□□□□ -1.74
KPNB1-208ENST00000580019 KBTBD2Q8IY47 623 aa4.21□□□□□ -1.74
KPNB1-208ENST00000580019 EXTL1Q92935 676 aa4.21□□□□□ -1.74
KPNB1-208ENST00000580019 CCDC136Q96JN2 1154 aa4.21□□□□□ -1.74
KPNB1-208ENST00000580019 MEGF9Q9H1U4 602 aa4.21□□□□□ -1.74
KPNB1-208ENST00000580019 PCDH12Q9NPG4 1184 aa4.21□□□□□ -1.74
KPNB1-208ENST00000580019 BCCIPQ9P287 314 aaKnown RBP eCLIP4.21□□□□□ -1.74
KPNB1-208ENST00000580019 SPG7Q9UQ90 795 aa4.21□□□□□ -1.74
KPNB1-208ENST00000580019 CCDC194A0A1B0GVG4 234 aa4.2□□□□□ -1.74
KPNB1-208ENST00000580019 HMGB1P1B2RPK0 211 aaPredicted RBP4.2□□□□□ -1.74
KPNB1-208ENST00000580019 HTR3BO95264 441 aa4.2□□□□□ -1.74
KPNB1-208ENST00000580019 EIF4BP23588 611 aaKnown RBP4.2□□□□□ -1.74
KPNB1-208ENST00000580019 GJA8P48165 433 aa4.2□□□□□ -1.74
KPNB1-208ENST00000580019 KRTAP10-6P60371 365 aaPredicted RBP4.2□□□□□ -1.74
KPNB1-208ENST00000580019 MAP3K11Q16584 847 aa4.2□□□□□ -1.74
KPNB1-208ENST00000580019 PRAMEF18Q5VWM3 479 aa4.2□□□□□ -1.74
KPNB1-208ENST00000580019 TMED8Q6PL24 325 aaPredicted RBP4.2□□□□□ -1.74
KPNB1-208ENST00000580019 SMC5Q8IY18 1101 aa4.2□□□□□ -1.74
KPNB1-208ENST00000580019 NETO2Q8NC67 525 aa4.2□□□□□ -1.74
KPNB1-208ENST00000580019 LARP4BQ92615 738 aaKnown RBP4.2□□□□□ -1.74
KPNB1-208ENST00000580019 PCGF6Q9BYE7 350 aa4.2□□□□□ -1.74
KPNB1-208ENST00000580019 TMEM168Q9H0V1 697 aa4.2□□□□□ -1.74
KPNB1-208ENST00000580019 PRDM16Q9HAZ2 1276 aa4.2□□□□□ -1.74
KPNB1-208ENST00000580019 GFOD1Q9NXC2 390 aa4.2□□□□□ -1.74
KPNB1-208ENST00000580019 SIRPGQ9P1W8 387 aa4.2□□□□□ -1.74
KPNB1-208ENST00000580019 GGT7Q9UJ14 662 aa4.2□□□□□ -1.74
KPNB1-208ENST00000580019 PCDHGB7Q9Y5F8 929 aa4.2□□□□□ -1.74
KPNB1-208ENST00000580019 U2SURPO15042 1029 aaKnown RBP4.19□□□□□ -1.74
KPNB1-208ENST00000580019 DNAJA2O60884 412 aa4.19□□□□□ -1.74
KPNB1-208ENST00000580019 RAMP2O60895 175 aa4.19□□□□□ -1.74
KPNB1-208ENST00000580019 EIF3JO75822 258 aaKnown RBP4.19□□□□□ -1.74
KPNB1-208ENST00000580019 MAP4K4O95819 1239 aaPredicted RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms