RNA–Protein interactions for RNA: ENST00000579969.1

SNORD53-201, Transcript of small nucleolar RNA, C/D box 53, humanhuman

BASIC

Gene SNORD53, Length 78 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53-201ENST00000579969 MICAL1Q8TDZ2 1067 aa2.93□□□□□ -1.94
SNORD53-201ENST00000579969 SECISBP2LQ93073 1101 aaKnown RBP2.93□□□□□ -1.94
SNORD53-201ENST00000579969 BORCS6Q96GS4 357 aa2.93□□□□□ -1.94
SNORD53-201ENST00000579969 CTAGE1Q96RT6 745 aa2.93□□□□□ -1.94
SNORD53-201ENST00000579969 PLVAPQ9BX97 442 aa2.93□□□□□ -1.94
SNORD53-201ENST00000579969 WDR11Q9BZH6 1224 aa2.93□□□□□ -1.94
SNORD53-201ENST00000579969 ZMYND15Q9H091 742 aa2.93□□□□□ -1.94
SNORD53-201ENST00000579969 USP44Q9H0E7 712 aa2.93□□□□□ -1.94
SNORD53-201ENST00000579969 EHD4Q9H223 541 aa2.93□□□□□ -1.94
SNORD53-201ENST00000579969 S1PR5Q9H228 398 aa2.93□□□□□ -1.94
SNORD53-201ENST00000579969 SH2D4AQ9H788 454 aa2.93□□□□□ -1.94
SNORD53-201ENST00000579969 TLE6Q9H808 572 aa2.93□□□□□ -1.94
SNORD53-201ENST00000579969 ARHGEF10LQ9HCE6 1279 aa2.93□□□□□ -1.94
SNORD53-201ENST00000579969 RAVER2Q9HCJ3 691 aaKnown RBP2.93□□□□□ -1.94
SNORD53-201ENST00000579969 TSHZ2Q9NRE2 1034 aa2.93□□□□□ -1.94
SNORD53-201ENST00000579969 FBXO40Q9UH90 709 aa2.93□□□□□ -1.94
SNORD53-201ENST00000579969 ZMIZ1Q9ULJ6 1067 aa2.93□□□□□ -1.94
SNORD53-201ENST00000579969 BARX2Q9UMQ3 279 aaPredicted RBP2.93□□□□□ -1.94
SNORD53-201ENST00000579969 USP18Q9UMW8 372 aa2.93□□□□□ -1.94
SNORD53-201ENST00000579969 PLAGL2Q9UPG8 496 aa2.93□□□□□ -1.94
SNORD53-201ENST00000579969 LHX6Q9UPM6 363 aa2.93□□□□□ -1.94
SNORD53-201ENST00000579969 AKAP2Q9Y2D5 859 aa2.93□□□□□ -1.94
SNORD53-201ENST00000579969 RWDD3Q9Y3V2 267 aa2.93□□□□□ -1.94
SNORD53-201ENST00000579969 NR2E1Q9Y466 385 aa2.93□□□□□ -1.94
SNORD53-201ENST00000579969 CTDP1Q9Y5B0 961 aaPredicted RBP2.93□□□□□ -1.94
SNORD53-201ENST00000579969 DDX49Q9Y6V7 483 aaKnown RBP2.93□□□□□ -1.94
SNORD53-201ENST00000579969 ASH1LQ9NR48 2969 aaKnown RBP2.93□□□□□ -1.94
SNORD53-201ENST00000579969 GCN1Q92616 2671 aaKnown RBP2.93□□□□□ -1.94
SNORD53-201ENST00000579969 USP9XQ93008 2570 aaPredicted RBP2.92□□□□□ -1.94
SNORD53-201ENST00000579969 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.92□□□□□ -1.94
SNORD53-201ENST00000579969 A6NJR5 290 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 C2CD4DB7Z1M9 353 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 TAF4O00268 1085 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 SLC30A4O14863 429 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 KINO60870 393 aaKnown RBP2.92□□□□□ -1.94
SNORD53-201ENST00000579969 PPFIA3O75145 1194 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 MMP1P03956 469 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 PTMAP06454 111 aaKnown RBP2.92□□□□□ -1.94
SNORD53-201ENST00000579969 EEF2P13639 858 aaKnown RBP2.92□□□□□ -1.94
SNORD53-201ENST00000579969 CYP7A1P22680 504 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 TGM1P22735 817 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 DNAJB1P25685 340 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 PMLP29590 882 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 SHC2P98077 582 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 ICA1Q05084 483 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 GABPAQ06546 454 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 RING1Q06587 406 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 RBL2Q08999 1139 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 TBC1D8BQ0IIM8 1120 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 MBTPS1Q14703 1052 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 NAALADL2Q58DX5 795 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 PLEKHG4Q58EX7 1191 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 FAM83BQ5T0W9 1011 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 N4BP2L1Q5TBK1 243 aaPredicted RBP2.92□□□□□ -1.94
SNORD53-201ENST00000579969 TRAF7Q6Q0C0 670 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 DHX30Q7L2E3 1194 aaKnown RBP eCLIP2.92□□□□□ -1.94
SNORD53-201ENST00000579969 FBXO16Q8IX29 292 aaPredicted RBP2.92□□□□□ -1.94
SNORD53-201ENST00000579969 MIGA1Q8NAN2 632 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 KDF1Q8NAX2 398 aaPredicted RBP2.92□□□□□ -1.94
SNORD53-201ENST00000579969 OR6J1Q8NGC5 347 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 ATP8B4Q8TF62 1192 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 SEPT8Q92599 483 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 DHX38Q92620 1227 aaKnown RBP2.92□□□□□ -1.94
SNORD53-201ENST00000579969 CLP1Q92989 425 aaKnown RBP2.92□□□□□ -1.94
SNORD53-201ENST00000579969 NEK1Q96PY6 1258 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 SLF1Q9BQI6 1058 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 APOL5Q9BWW9 433 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 IFIH1Q9BYX4 1025 aaKnown RBP2.92□□□□□ -1.94
SNORD53-201ENST00000579969 ERVK-5Q9HDB9 667 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 VTA1Q9NP79 307 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 SNRKQ9NRH2 765 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 RNF216Q9NWF9 866 aaPredicted RBP2.92□□□□□ -1.94
SNORD53-201ENST00000579969 FBXL21Q9UKT6 434 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 PA2G4Q9UQ80 394 aaKnown RBP2.92□□□□□ -1.94
SNORD53-201ENST00000579969 COG6Q9Y2V7 657 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 HELZ2Q9BYK8 2649 aaKnown RBP2.92□□□□□ -1.94
SNORD53-201ENST00000579969 MICAL3Q7RTP6 2002 aa2.92□□□□□ -1.94
SNORD53-201ENST00000579969 SMG1Q96Q15 3661 aaKnown RBP2.91□□□□□ -1.94
SNORD53-201ENST00000579969 ZNF462Q96JM2 2506 aa2.91□□□□□ -1.94
SNORD53-201ENST00000579969 SIPA1L1O43166 1804 aa2.91□□□□□ -1.94
SNORD53-201ENST00000579969 MYO18BQ8IUG5 2567 aa2.91□□□□□ -1.94
SNORD53-201ENST00000579969 RALGAPA2Q2PPJ7 1873 aa2.91□□□□□ -1.94
SNORD53-201ENST00000579969 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.91□□□□□ -1.94
SNORD53-201ENST00000579969 RBM47A0AV96 593 aaKnown RBP2.91□□□□□ -1.94
SNORD53-201ENST00000579969 SRRM3A6NNA2 597 aaPredicted RBP2.91□□□□□ -1.94
SNORD53-201ENST00000579969 RSPH10B2B2RC85 870 aa2.91□□□□□ -1.94
SNORD53-201ENST00000579969 C1QTNF9BB2RNN3 333 aa2.91□□□□□ -1.94
SNORD53-201ENST00000579969 ITGB1P05556 798 aa2.91□□□□□ -1.94
SNORD53-201ENST00000579969 UQCRFS1P1P0C7P4 283 aa2.91□□□□□ -1.94
SNORD53-201ENST00000579969 LINC00271P0C7V0 271 aa2.91□□□□□ -1.94
SNORD53-201ENST00000579969 C1QTNF9P0C862 333 aa2.91□□□□□ -1.94
SNORD53-201ENST00000579969 RSPH10BP0C881 870 aa2.91□□□□□ -1.94
SNORD53-201ENST00000579969 AKR1B1P15121 316 aa2.91□□□□□ -1.94
SNORD53-201ENST00000579969 HOXB8P17481 243 aaPredicted RBP2.91□□□□□ -1.94
SNORD53-201ENST00000579969 TECP42680 631 aa2.91□□□□□ -1.94
SNORD53-201ENST00000579969 EXOSC9Q06265 439 aaKnown RBP2.91□□□□□ -1.94
SNORD53-201ENST00000579969 TFCP2Q12800 502 aa2.91□□□□□ -1.94
SNORD53-201ENST00000579969 PTK7Q13308 1070 aa2.91□□□□□ -1.94
SNORD53-201ENST00000579969 BTG3Q14201 252 aaPredicted RBP2.91□□□□□ -1.94
SNORD53-201ENST00000579969 RALBP1Q15311 655 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms