RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 CCDC62Q6P9F0 684 aa14.35□□□□□ -0.11
CDK5RAP3-216ENST00000579853 RASGRP2Q7LDG7 609 aa14.35□□□□□ -0.11
CDK5RAP3-216ENST00000579853 SPRED2Q7Z698 418 aa14.35□□□□□ -0.11
CDK5RAP3-216ENST00000579853 ALYREFQ86V81 257 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-216ENST00000579853 SAMD11Q96NU1 681 aa14.35□□□□□ -0.11
CDK5RAP3-216ENST00000579853 TCP11L1Q9NUJ3 509 aa14.35□□□□□ -0.11
CDK5RAP3-216ENST00000579853 GTF2IRD1Q9UHL9 959 aa14.35□□□□□ -0.11
CDK5RAP3-216ENST00000579853 MTUS1Q9ULD2 1270 aa14.35□□□□□ -0.11
CDK5RAP3-216ENST00000579853 SIP14410 1827 aa14.35□□□□□ -0.11
CDK5RAP3-216ENST00000579853 FGRP09769 529 aa14.34□□□□□ -0.11
CDK5RAP3-216ENST00000579853 CKBP12277 381 aa14.34□□□□□ -0.11
CDK5RAP3-216ENST00000579853 PTK7Q13308 1070 aa14.34□□□□□ -0.11
CDK5RAP3-216ENST00000579853 GPNMBQ14956 572 aa14.34□□□□□ -0.11
CDK5RAP3-216ENST00000579853 PTCRAQ6ISU1 281 aaPredicted RBP14.34□□□□□ -0.11
CDK5RAP3-216ENST00000579853 C7orf31Q8N865 590 aa14.34□□□□□ -0.11
CDK5RAP3-216ENST00000579853 FBXO22Q8NEZ5 403 aa14.34□□□□□ -0.11
CDK5RAP3-216ENST00000579853 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.34□□□□□ -0.11
CDK5RAP3-216ENST00000579853 PPP1R13LQ8WUF5 828 aa14.34□□□□□ -0.11
CDK5RAP3-216ENST00000579853 AFG1LQ8WV93 481 aa14.34□□□□□ -0.11
CDK5RAP3-216ENST00000579853 CTAGE1Q96RT6 745 aa14.34□□□□□ -0.11
CDK5RAP3-216ENST00000579853 GPCPD1Q9NPB8 672 aa14.34□□□□□ -0.11
CDK5RAP3-216ENST00000579853 TOMM22Q9NS69 142 aa14.34□□□□□ -0.11
CDK5RAP3-216ENST00000579853 EMSYQ7Z589 1322 aa14.34□□□□□ -0.11
CDK5RAP3-216ENST00000579853 MYO7AQ13402 2215 aa14.34□□□□□ -0.11
CDK5RAP3-216ENST00000579853 ZNF318Q5VUA4 2279 aa14.34□□□□□ -0.11
CDK5RAP3-216ENST00000579853 GRXCR2A6NFK2 248 aa14.33□□□□□ -0.12
CDK5RAP3-216ENST00000579853 NBNO60934 754 aa14.33□□□□□ -0.12
CDK5RAP3-216ENST00000579853 ARIH2O95376 493 aa14.33□□□□□ -0.12
CDK5RAP3-216ENST00000579853 STXBP2Q15833 593 aa14.33□□□□□ -0.12
CDK5RAP3-216ENST00000579853 TIGD5Q53EQ6 642 aa14.33□□□□□ -0.12
CDK5RAP3-216ENST00000579853 TMCO2Q7Z6W1 182 aaPredicted RBP14.33□□□□□ -0.12
CDK5RAP3-216ENST00000579853 NSUN6Q8TEA1 469 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-216ENST00000579853 TTC14Q96N46 770 aa14.33□□□□□ -0.12
CDK5RAP3-216ENST00000579853 UIMC1Q96RL1 719 aa14.33□□□□□ -0.12
CDK5RAP3-216ENST00000579853 IWS1Q96ST2 819 aa14.33□□□□□ -0.12
CDK5RAP3-216ENST00000579853 TMEM47Q9BQJ4 181 aa14.33□□□□□ -0.12
CDK5RAP3-216ENST00000579853 CFAP54Q96N23 3096 aa14.33□□□□□ -0.12
CDK5RAP3-216ENST00000579853 ZFHX2Q9C0A1 2572 aaPredicted RBP14.33□□□□□ -0.12
CDK5RAP3-216ENST00000579853 SPTBN4Q9H254 2564 aa14.33□□□□□ -0.12
CDK5RAP3-216ENST00000579853 CACNA1HO95180 2353 aa14.33□□□□□ -0.12
CDK5RAP3-216ENST00000579853 FRMPD2Q68DX3 1309 aaPredicted RBP14.33□□□□□ -0.12
CDK5RAP3-216ENST00000579853 ZDBF2Q9HCK1 2354 aa14.32□□□□□ -0.12
CDK5RAP3-216ENST00000579853 DCXO43602 365 aa14.32□□□□□ -0.12
CDK5RAP3-216ENST00000579853 AMHP03971 560 aa14.32□□□□□ -0.12
CDK5RAP3-216ENST00000579853 PDHBP11177 359 aa14.32□□□□□ -0.12
CDK5RAP3-216ENST00000579853 ARHGAP1Q07960 439 aa14.32□□□□□ -0.12
CDK5RAP3-216ENST00000579853 ZNF543Q08ER8 600 aa14.32□□□□□ -0.12
CDK5RAP3-216ENST00000579853 ALX1Q15699 326 aa14.32□□□□□ -0.12
CDK5RAP3-216ENST00000579853 GPATCH4Q5T3I0 446 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP3-216ENST00000579853 NEK9Q8TD19 979 aa14.32□□□□□ -0.12
CDK5RAP3-216ENST00000579853 DHX38Q92620 1227 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP3-216ENST00000579853 KAT2BQ92831 832 aa14.32□□□□□ -0.12
CDK5RAP3-216ENST00000579853 EMID1Q96A84 441 aaPredicted RBP14.32□□□□□ -0.12
CDK5RAP3-216ENST00000579853 MRPL38Q96DV4 380 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP3-216ENST00000579853 INCENPQ9NQS7 918 aa14.32□□□□□ -0.12
CDK5RAP3-216ENST00000579853 PRKAG3Q9UGI9 489 aa14.32□□□□□ -0.12
CDK5RAP3-216ENST00000579853 LGR5O75473 907 aa14.31□□□□□ -0.12
CDK5RAP3-216ENST00000579853 SNHG28P0DPA3 235 aa14.31□□□□□ -0.12
CDK5RAP3-216ENST00000579853 PCP11498 1178 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-216ENST00000579853 IL9P15248 144 aa14.31□□□□□ -0.12
CDK5RAP3-216ENST00000579853 MRE11P49959 708 aa14.31□□□□□ -0.12
CDK5RAP3-216ENST00000579853 LY6KQ17RY6 165 aa14.31□□□□□ -0.12
CDK5RAP3-216ENST00000579853 SEPT14Q6ZU15 432 aa14.31□□□□□ -0.12
CDK5RAP3-216ENST00000579853 CHST3Q7LGC8 479 aa14.31□□□□□ -0.12
CDK5RAP3-216ENST00000579853 MCF2L2Q86YR7 1114 aa14.31□□□□□ -0.12
CDK5RAP3-216ENST00000579853 PI4K2BQ8TCG2 481 aa14.31□□□□□ -0.12
CDK5RAP3-216ENST00000579853 UPF3BQ9BZI7 483 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-216ENST00000579853 HDAC6Q9UBN7 1215 aa14.31□□□□□ -0.12
CDK5RAP3-216ENST00000579853 MICAL3Q7RTP6 2002 aa14.31□□□□□ -0.12
CDK5RAP3-216ENST00000579853 FOXP2O15409 715 aa14.3□□□□□ -0.12
CDK5RAP3-216ENST00000579853 NCK2O43639 380 aa14.3□□□□□ -0.12
CDK5RAP3-216ENST00000579853 F2P00734 622 aa14.3□□□□□ -0.12
CDK5RAP3-216ENST00000579853 PSEN2P49810 448 aa14.3□□□□□ -0.12
CDK5RAP3-216ENST00000579853 HTRA4P83105 476 aaPredicted RBP14.3□□□□□ -0.12
CDK5RAP3-216ENST00000579853 LAMC2Q13753 1193 aa14.3□□□□□ -0.12
CDK5RAP3-216ENST00000579853 FAM117BQ6P1L5 589 aa14.3□□□□□ -0.12
CDK5RAP3-216ENST00000579853 PPTC7Q8NI37 304 aa14.3□□□□□ -0.12
CDK5RAP3-216ENST00000579853 SP7Q8TDD2 431 aaPredicted RBP14.3□□□□□ -0.12
CDK5RAP3-216ENST00000579853 PABPC5Q96DU9 382 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP3-216ENST00000579853 KIAA1217Q5T5P2 1943 aa14.3□□□□□ -0.12
CDK5RAP3-216ENST00000579853 ABCB11O95342 1321 aa14.3□□□□□ -0.12
CDK5RAP3-216ENST00000579853 POTEB3A0JP26 581 aa14.29□□□□□ -0.12
CDK5RAP3-216ENST00000579853 EIF3JO75822 258 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP3-216ENST00000579853 NT5C2P49902 561 aa14.29□□□□□ -0.12
CDK5RAP3-216ENST00000579853 NHLH1Q02575 133 aa14.29□□□□□ -0.12
CDK5RAP3-216ENST00000579853 MFSD10Q14728 455 aa14.29□□□□□ -0.12
CDK5RAP3-216ENST00000579853 KIAA0753Q2KHM9 967 aa14.29□□□□□ -0.12
CDK5RAP3-216ENST00000579853 TRIM71Q2Q1W2 868 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP3-216ENST00000579853 USH1GQ495M9 461 aa14.29□□□□□ -0.12
CDK5RAP3-216ENST00000579853 RRP12Q5JTH9 1297 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP3-216ENST00000579853 ZNF618Q5T7W0 954 aa14.29□□□□□ -0.12
CDK5RAP3-216ENST00000579853 KCNV1Q6PIU1 500 aa14.29□□□□□ -0.12
CDK5RAP3-216ENST00000579853 POTEBQ6S5H4 581 aa14.29□□□□□ -0.12
CDK5RAP3-216ENST00000579853 TICAM2Q86XR7 235 aa14.29□□□□□ -0.12
CDK5RAP3-216ENST00000579853 MYOCDQ8IZQ8 938 aa14.29□□□□□ -0.12
CDK5RAP3-216ENST00000579853 BANK1Q8NDB2 785 aa14.29□□□□□ -0.12
CDK5RAP3-216ENST00000579853 RMDN3Q96TC7 470 aa14.29□□□□□ -0.12
CDK5RAP3-216ENST00000579853 C17orf80Q9BSJ5 609 aa14.29□□□□□ -0.12
CDK5RAP3-216ENST00000579853 ALG1Q9BT22 464 aa14.29□□□□□ -0.12
CDK5RAP3-216ENST00000579853 HELLSQ9NRZ9 838 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 232.4 ms