RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 NELL2Q99435 816 aa7.5□□□□□ -1.21
COPS3-216ENST00000579716 CYP4F11Q9HBI6 524 aa7.5□□□□□ -1.21
COPS3-216ENST00000579716 EPB41L4AQ9HCS5 686 aaPredicted RBP7.5□□□□□ -1.21
COPS3-216ENST00000579716 ABCB6Q9NP58 842 aa7.5□□□□□ -1.21
COPS3-216ENST00000579716 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.5□□□□□ -1.21
COPS3-216ENST00000579716 ITM2BQ9Y287 266 aa7.5□□□□□ -1.21
COPS3-216ENST00000579716 MAGED1Q9Y5V3 778 aaPredicted RBP7.5□□□□□ -1.21
COPS3-216ENST00000579716 TRIM64A6NGJ6 449 aa7.49□□□□□ -1.21
COPS3-216ENST00000579716 TRIM64BA6NI03 449 aa7.49□□□□□ -1.21
COPS3-216ENST00000579716 AKAP10O43572 662 aa7.49□□□□□ -1.21
COPS3-216ENST00000579716 TMCC2O75069 709 aa7.49□□□□□ -1.21
COPS3-216ENST00000579716 SKAP2O75563 359 aaPredicted RBP7.49□□□□□ -1.21
COPS3-216ENST00000579716 CCNCP24863 283 aa7.49□□□□□ -1.21
COPS3-216ENST00000579716 CTNNA1P35221 906 aaKnown RBP7.49□□□□□ -1.21
COPS3-216ENST00000579716 MAPK8P45983 427 aa7.49□□□□□ -1.21
COPS3-216ENST00000579716 CCT5P48643 541 aa7.49□□□□□ -1.21
COPS3-216ENST00000579716 SESN3P58005 492 aa7.49□□□□□ -1.21
COPS3-216ENST00000579716 SARNPP82979 210 aaKnown RBP7.49□□□□□ -1.21
COPS3-216ENST00000579716 PFKPQ01813 784 aa7.49□□□□□ -1.21
COPS3-216ENST00000579716 ATP2B2Q01814 1243 aa7.49□□□□□ -1.21
COPS3-216ENST00000579716 PLCB3Q01970 1234 aa7.49□□□□□ -1.21
COPS3-216ENST00000579716 CCDC15Q0P6D6 951 aa7.49□□□□□ -1.21
COPS3-216ENST00000579716 ORC1Q13415 861 aa7.49□□□□□ -1.21
COPS3-216ENST00000579716 RAB33AQ14088 237 aa7.49□□□□□ -1.21
COPS3-216ENST00000579716 WTAPQ15007 396 aa7.49□□□□□ -1.21
COPS3-216ENST00000579716 NXNQ6DKJ4 435 aa7.49□□□□□ -1.21
COPS3-216ENST00000579716 ANKS3Q6ZW76 656 aa7.49□□□□□ -1.21
COPS3-216ENST00000579716 RASGRP2Q7LDG7 609 aa7.49□□□□□ -1.21
COPS3-216ENST00000579716 CATSPER4Q7RTX7 472 aa7.49□□□□□ -1.21
COPS3-216ENST00000579716 PNMA8AQ86V59 439 aaPredicted RBP7.49□□□□□ -1.21
COPS3-216ENST00000579716 LILRB2Q8N423 598 aa7.49□□□□□ -1.21
COPS3-216ENST00000579716 NUP133Q8WUM0 1156 aa7.49□□□□□ -1.21
COPS3-216ENST00000579716 CHAC2Q8WUX2 184 aa7.49□□□□□ -1.21
COPS3-216ENST00000579716 FAM168AQ92567 244 aa7.49□□□□□ -1.21
COPS3-216ENST00000579716 MISP3Q96FF7 219 aa7.49□□□□□ -1.21
COPS3-216ENST00000579716 ELAC2Q9BQ52 826 aaKnown RBP7.49□□□□□ -1.21
COPS3-216ENST00000579716 ZNF408Q9H9D4 720 aa7.49□□□□□ -1.21
COPS3-216ENST00000579716 ZNHIT6Q9NWK9 470 aaKnown RBP7.49□□□□□ -1.21
COPS3-216ENST00000579716 VAV3Q9UKW4 847 aa7.49□□□□□ -1.21
COPS3-216ENST00000579716 PA2G4Q9UQ80 394 aaKnown RBP7.49□□□□□ -1.21
COPS3-216ENST00000579716 MORC2Q9Y6X9 1032 aaPredicted RBP7.49□□□□□ -1.21
COPS3-216ENST00000579716 GPRASP1Q5JY77 1395 aa7.48□□□□□ -1.21
COPS3-216ENST00000579716 E2F8A0AVK6 867 aa7.48□□□□□ -1.21
COPS3-216ENST00000579716 BOLA2-SMG1P6H3BVE0 249 aa7.48□□□□□ -1.21
COPS3-216ENST00000579716 NBNO60934 754 aa7.48□□□□□ -1.21
COPS3-216ENST00000579716 GLULP15104 373 aa7.48□□□□□ -1.21
COPS3-216ENST00000579716 VCAM1P19320 739 aa7.48□□□□□ -1.21
COPS3-216ENST00000579716 RENBPP51606 427 aa7.48□□□□□ -1.21
COPS3-216ENST00000579716 ZNF157P51786 506 aaPredicted RBP7.48□□□□□ -1.21
COPS3-216ENST00000579716 APBA1Q02410 837 aa7.48□□□□□ -1.21
COPS3-216ENST00000579716 PRKCQQ04759 706 aa7.48□□□□□ -1.21
COPS3-216ENST00000579716 MRPL28Q13084 256 aaKnown RBP7.48□□□□□ -1.21
COPS3-216ENST00000579716 SF3B3Q15393 1217 aaKnown RBP7.48□□□□□ -1.21
COPS3-216ENST00000579716 CYP27C1Q4G0S4 372 aa7.48□□□□□ -1.21
COPS3-216ENST00000579716 ARMC4Q5T2S8 1044 aa7.48□□□□□ -1.21
COPS3-216ENST00000579716 CDCA2Q69YH5 1023 aaPredicted RBP7.48□□□□□ -1.21
COPS3-216ENST00000579716 ELOA2Q8IYF1 753 aaPredicted RBP7.48□□□□□ -1.21
COPS3-216ENST00000579716 JMYQ8N9B5 988 aa7.48□□□□□ -1.21
COPS3-216ENST00000579716 TDRD7Q8NHU6 1098 aaKnown RBP7.48□□□□□ -1.21
COPS3-216ENST00000579716 GPRASP2Q96D09 838 aa7.48□□□□□ -1.21
COPS3-216ENST00000579716 STRBPQ96SI9 672 aaKnown RBP7.48□□□□□ -1.21
COPS3-216ENST00000579716 TRIM8Q9BZR9 551 aa7.48□□□□□ -1.21
COPS3-216ENST00000579716 ZC3H12CQ9C0D7 883 aaKnown RBP7.48□□□□□ -1.21
COPS3-216ENST00000579716 IQCGQ9H095 443 aaKnown RBP7.48□□□□□ -1.21
COPS3-216ENST00000579716 CNNM2Q9H8M5 875 aa7.48□□□□□ -1.21
COPS3-216ENST00000579716 RC3H2Q9HBD1 1191 aaKnown RBP7.48□□□□□ -1.21
COPS3-216ENST00000579716 KIAA1586Q9HCI6 787 aa7.48□□□□□ -1.21
COPS3-216ENST00000579716 PLCB1Q9NQ66 1216 aa7.48□□□□□ -1.21
COPS3-216ENST00000579716 RASSF1Q9NS23 344 aa7.48□□□□□ -1.21
COPS3-216ENST00000579716 ZMAT5Q9UDW3 170 aaKnown RBP7.48□□□□□ -1.21
COPS3-216ENST00000579716 DGKBQ9Y6T7 804 aa7.48□□□□□ -1.21
COPS3-216ENST00000579716 TMCO5BA8MYB1 307 aa7.47□□□□□ -1.21
COPS3-216ENST00000579716 TOR1BO14657 336 aa7.47□□□□□ -1.21
COPS3-216ENST00000579716 AKR1B10O60218 316 aa7.47□□□□□ -1.21
COPS3-216ENST00000579716 FARP2O94887 1054 aaPredicted RBP7.47□□□□□ -1.21
COPS3-216ENST00000579716 KCNA6P17658 529 aa7.47□□□□□ -1.21
COPS3-216ENST00000579716 HPDP32754 393 aaPredicted RBP7.47□□□□□ -1.21
COPS3-216ENST00000579716 NEK2P51955 445 aa7.47□□□□□ -1.21
COPS3-216ENST00000579716 PTPN12Q05209 780 aaKnown RBP7.47□□□□□ -1.21
COPS3-216ENST00000579716 CHAF1AQ13111 956 aaPredicted RBP7.47□□□□□ -1.21
COPS3-216ENST00000579716 PRKG2Q13237 762 aa7.47□□□□□ -1.21
COPS3-216ENST00000579716 PDE3AQ14432 1141 aa7.47□□□□□ -1.21
COPS3-216ENST00000579716 KRT72Q14CN4 511 aa7.47□□□□□ -1.21
COPS3-216ENST00000579716 KIF4BQ2VIQ3 1234 aa7.47□□□□□ -1.21
COPS3-216ENST00000579716 FAM102BQ5T8I3 360 aa7.47□□□□□ -1.21
COPS3-216ENST00000579716 IRGCQ6NXR0 463 aa7.47□□□□□ -1.21
COPS3-216ENST00000579716 CCBE1Q6UXH8 406 aaPredicted RBP7.47□□□□□ -1.21
COPS3-216ENST00000579716 MYOCDQ8IZQ8 938 aa7.47□□□□□ -1.21
COPS3-216ENST00000579716 PJA1Q8NG27 643 aa7.47□□□□□ -1.21
COPS3-216ENST00000579716 GSDMBQ8TAX9 411 aa7.47□□□□□ -1.21
COPS3-216ENST00000579716 TMEM40Q8WWA1 233 aa7.47□□□□□ -1.21
COPS3-216ENST00000579716 IPCEF1Q8WWN9 437 aaPredicted RBP7.47□□□□□ -1.21
COPS3-216ENST00000579716 HVCN1Q96D96 273 aa7.47□□□□□ -1.21
COPS3-216ENST00000579716 HEXIM2Q96MH2 286 aaKnown RBP7.47□□□□□ -1.21
COPS3-216ENST00000579716 DNAJC7Q99615 494 aa7.47□□□□□ -1.21
COPS3-216ENST00000579716 DUSP23Q9BVJ7 150 aa7.47□□□□□ -1.21
COPS3-216ENST00000579716 TEX13AQ9BXU3 409 aaPredicted RBP7.47□□□□□ -1.21
COPS3-216ENST00000579716 DEF6Q9H4E7 631 aa7.47□□□□□ -1.21
COPS3-216ENST00000579716 PLEKHA5Q9HAU0 1116 aa7.47□□□□□ -1.21
COPS3-216ENST00000579716 ZFYVE1Q9HBF4 777 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms