RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 FOXD4L1Q9NU39 408 aa17.77■□□□□ 0.44
SLC6A4-205ENST00000579221 CCDC194A0A1B0GVG4 234 aa17.76■□□□□ 0.43
SLC6A4-205ENST00000579221 RBM47A0AV96 593 aaKnown RBP17.76■□□□□ 0.43
SLC6A4-205ENST00000579221 H3BQV1 296 aa17.76■□□□□ 0.43
SLC6A4-205ENST00000579221 MSCO60682 206 aa17.76■□□□□ 0.43
SLC6A4-205ENST00000579221 AKR1A1P14550 325 aa17.76■□□□□ 0.43
SLC6A4-205ENST00000579221 PDCP20941 246 aa17.76■□□□□ 0.43
SLC6A4-205ENST00000579221 ZNF76P36508 570 aa17.76■□□□□ 0.43
SLC6A4-205ENST00000579221 SREBF1P36956 1147 aa17.76■□□□□ 0.43
SLC6A4-205ENST00000579221 NONOQ15233 471 aaKnown RBP eCLIP17.76■□□□□ 0.43
SLC6A4-205ENST00000579221 CCDC144BQ3MJ40 725 aa17.76■□□□□ 0.43
SLC6A4-205ENST00000579221 GNPTABQ3T906 1256 aa17.76■□□□□ 0.43
SLC6A4-205ENST00000579221 IFFO2Q5TF58 517 aa17.76■□□□□ 0.43
SLC6A4-205ENST00000579221 SEPT14Q6ZU15 432 aa17.76■□□□□ 0.43
SLC6A4-205ENST00000579221 NLRX1Q86UT6 975 aa17.76■□□□□ 0.43
SLC6A4-205ENST00000579221 DIS3L2Q8IYB7 885 aaKnown RBP17.76■□□□□ 0.43
SLC6A4-205ENST00000579221 IL31RAQ8NI17 732 aa17.76■□□□□ 0.43
SLC6A4-205ENST00000579221 ABHD8Q96I13 439 aa17.76■□□□□ 0.43
SLC6A4-205ENST00000579221 RTEL1Q9NZ71 1219 aa17.76■□□□□ 0.43
SLC6A4-205ENST00000579221 DDX20Q9UHI6 824 aaKnown RBP17.76■□□□□ 0.43
SLC6A4-205ENST00000579221 PLXNA1Q9UIW2 1896 aa17.75■□□□□ 0.43
SLC6A4-205ENST00000579221 BTBD18B2RXH4 712 aa17.75■□□□□ 0.43
SLC6A4-205ENST00000579221 CYP3A4P08684 503 aa17.75■□□□□ 0.43
SLC6A4-205ENST00000579221 USP11P51784 963 aa17.75■□□□□ 0.43
SLC6A4-205ENST00000579221 MRPS9P82933 396 aaKnown RBP17.75■□□□□ 0.43
SLC6A4-205ENST00000579221 ARHGAP4P98171 946 aa17.75■□□□□ 0.43
SLC6A4-205ENST00000579221 TNFAIP2Q03169 654 aa17.75■□□□□ 0.43
SLC6A4-205ENST00000579221 GNL2Q13823 731 aaKnown RBP17.75■□□□□ 0.43
SLC6A4-205ENST00000579221 KCNV1Q6PIU1 500 aa17.75■□□□□ 0.43
SLC6A4-205ENST00000579221 OXER1Q8TDS5 423 aa17.75■□□□□ 0.43
SLC6A4-205ENST00000579221 SCFD2Q8WU76 684 aa17.75■□□□□ 0.43
SLC6A4-205ENST00000579221 WDR11Q9BZH6 1224 aa17.75■□□□□ 0.43
SLC6A4-205ENST00000579221 PAK6Q9NQU5 681 aaPredicted RBP17.75■□□□□ 0.43
SLC6A4-205ENST00000579221 PDGFCQ9NRA1 345 aa17.75■□□□□ 0.43
SLC6A4-205ENST00000579221 RBBP6Q7Z6E9 1792 aaKnown RBP17.75■□□□□ 0.43
SLC6A4-205ENST00000579221 GJB1P08034 283 aa17.74■□□□□ 0.43
SLC6A4-205ENST00000579221 CAPN2P17655 700 aa17.74■□□□□ 0.43
SLC6A4-205ENST00000579221 ADCYAP1R1P41586 468 aa17.74■□□□□ 0.43
SLC6A4-205ENST00000579221 TTLL4Q14679 1199 aa17.74■□□□□ 0.43
SLC6A4-205ENST00000579221 TBCKQ8TEA7 893 aa17.74■□□□□ 0.43
SLC6A4-205ENST00000579221 ZFP91Q96JP5 570 aaPredicted RBP17.74■□□□□ 0.43
SLC6A4-205ENST00000579221 FOXP1Q9H334 677 aaPredicted RBP17.74■□□□□ 0.43
SLC6A4-205ENST00000579221 UBIAD1Q9Y5Z9 338 aa17.74■□□□□ 0.43
SLC6A4-205ENST00000579221 NKRFO15226 690 aaKnown RBP eCLIP17.73■□□□□ 0.43
SLC6A4-205ENST00000579221 MAFGO15525 162 aa17.73■□□□□ 0.43
SLC6A4-205ENST00000579221 TXNP10599 105 aaKnown RBP17.73■□□□□ 0.43
SLC6A4-205ENST00000579221 TGFB3P10600 412 aa17.73■□□□□ 0.43
SLC6A4-205ENST00000579221 RARBP10826 455 aa17.73■□□□□ 0.43
SLC6A4-205ENST00000579221 NR5A1Q13285 461 aa17.73■□□□□ 0.43
SLC6A4-205ENST00000579221 PIK3AP1Q6ZUJ8 805 aa17.73■□□□□ 0.43
SLC6A4-205ENST00000579221 INPP4AQ96PE3 977 aaPredicted RBP17.73■□□□□ 0.43
SLC6A4-205ENST00000579221 DEFB118Q96PH6 123 aa17.73■□□□□ 0.43
SLC6A4-205ENST00000579221 MXRA8Q9BRK3 442 aa17.73■□□□□ 0.43
SLC6A4-205ENST00000579221 JADE2Q9NQC1 790 aa17.73■□□□□ 0.43
SLC6A4-205ENST00000579221 MRVI1Q9Y6F6 885 aa17.73■□□□□ 0.43
SLC6A4-205ENST00000579221 LCTP09848 1927 aa17.72■□□□□ 0.43
SLC6A4-205ENST00000579221 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.72■□□□□ 0.43
SLC6A4-205ENST00000579221 DUSP11O75319 330 aaKnown RBP17.72■□□□□ 0.43
SLC6A4-205ENST00000579221 RGS20O76081 388 aa17.72■□□□□ 0.43
SLC6A4-205ENST00000579221 SGPL1O95470 568 aa17.72■□□□□ 0.43
SLC6A4-205ENST00000579221 TFRCP02786 760 aaKnown RBP17.72■□□□□ 0.43
SLC6A4-205ENST00000579221 ICAM3P32942 547 aa17.72■□□□□ 0.43
SLC6A4-205ENST00000579221 DUSP28Q4G0W2 176 aa17.72■□□□□ 0.43
SLC6A4-205ENST00000579221 LHX8Q68G74 356 aa17.72■□□□□ 0.43
SLC6A4-205ENST00000579221 MCTP1Q6DN14 999 aa17.72■□□□□ 0.43
SLC6A4-205ENST00000579221 NIPA1Q7RTP0 329 aa17.72■□□□□ 0.43
SLC6A4-205ENST00000579221 SPRYD3Q8NCJ5 442 aa17.72■□□□□ 0.43
SLC6A4-205ENST00000579221 CRYGNQ8WXF5 182 aa17.72■□□□□ 0.43
SLC6A4-205ENST00000579221 TNFRSF25Q93038 417 aa17.72■□□□□ 0.43
SLC6A4-205ENST00000579221 GPRASP2Q96D09 838 aa17.72■□□□□ 0.43
SLC6A4-205ENST00000579221 CDHR1Q96JP9 859 aa17.72■□□□□ 0.43
SLC6A4-205ENST00000579221 Q9Y3F1 56 aa17.72■□□□□ 0.43
SLC6A4-205ENST00000579221 CCDC85CA6NKD9 419 aa17.71■□□□□ 0.43
SLC6A4-205ENST00000579221 SPATA31C2B4DYI2 1134 aa17.71■□□□□ 0.43
SLC6A4-205ENST00000579221 FIBPO43427 364 aa17.71■□□□□ 0.43
SLC6A4-205ENST00000579221 PDIA4P13667 645 aaKnown RBP17.71■□□□□ 0.43
SLC6A4-205ENST00000579221 SMPD1P17405 629 aa17.71■□□□□ 0.43
SLC6A4-205ENST00000579221 ITGB5P18084 799 aa17.71■□□□□ 0.43
SLC6A4-205ENST00000579221 CIITAP33076 1130 aa17.71■□□□□ 0.43
SLC6A4-205ENST00000579221 GJA8P48165 433 aa17.71■□□□□ 0.43
SLC6A4-205ENST00000579221 INF2Q27J81 1249 aa17.71■□□□□ 0.43
SLC6A4-205ENST00000579221 CEP55Q53EZ4 464 aa17.71■□□□□ 0.43
SLC6A4-205ENST00000579221 ANO1Q5XXA6 986 aa17.71■□□□□ 0.43
SLC6A4-205ENST00000579221 CCDC62Q6P9F0 684 aa17.71■□□□□ 0.43
SLC6A4-205ENST00000579221 NEK8Q86SG6 692 aa17.71■□□□□ 0.43
SLC6A4-205ENST00000579221 NAP1L4Q99733 375 aaKnown RBP17.71■□□□□ 0.43
SLC6A4-205ENST00000579221 AP5M1Q9H0R1 490 aa17.71■□□□□ 0.43
SLC6A4-205ENST00000579221 SPC25Q9HBM1 224 aa17.71■□□□□ 0.43
SLC6A4-205ENST00000579221 DDX41Q9UJV9 622 aaKnown RBP17.71■□□□□ 0.43
SLC6A4-205ENST00000579221 MEIS1O00470 390 aa17.7■□□□□ 0.42
SLC6A4-205ENST00000579221 DYNC1LI2O43237 492 aaPredicted RBP17.7■□□□□ 0.42
SLC6A4-205ENST00000579221 SYT1P21579 422 aa17.7■□□□□ 0.42
SLC6A4-205ENST00000579221 U2AF2P26368 475 aaKnown RBP eCLIP17.7■□□□□ 0.42
SLC6A4-205ENST00000579221 MTMR1Q13613 665 aa17.7■□□□□ 0.42
SLC6A4-205ENST00000579221 LY6KQ17RY6 165 aa17.7■□□□□ 0.42
SLC6A4-205ENST00000579221 PLA2G4DQ86XP0 818 aa17.7■□□□□ 0.42
SLC6A4-205ENST00000579221 ARRDC4Q8NCT1 418 aa17.7■□□□□ 0.42
SLC6A4-205ENST00000579221 U2AF1L4Q8WU68 220 aaKnown RBP17.7■□□□□ 0.42
SLC6A4-205ENST00000579221 XPNPEP3Q9NQH7 507 aa17.7■□□□□ 0.42
SLC6A4-205ENST00000579221 GNEQ9Y223 722 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms