RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 SCG2P13521 617 aa25.5■■□□□ 1.67
SMARCD2-206ENST00000577990 CCND2P30279 289 aa25.5■■□□□ 1.67
SMARCD2-206ENST00000577990 AK2P54819 239 aa25.5■■□□□ 1.67
SMARCD2-206ENST00000577990 AKAP17AQ02040 695 aaKnown RBP25.5■■□□□ 1.67
SMARCD2-206ENST00000577990 STK3Q13188 491 aa25.5■■□□□ 1.67
SMARCD2-206ENST00000577990 TTLL4Q14679 1199 aa25.5■■□□□ 1.67
SMARCD2-206ENST00000577990 KCNA10Q16322 511 aa25.5■■□□□ 1.67
SMARCD2-206ENST00000577990 GNASQ5JWF2 1037 aa25.5■■□□□ 1.67
SMARCD2-206ENST00000577990 VSIG10LQ86VR7 867 aa25.5■■□□□ 1.67
SMARCD2-206ENST00000577990 PCSK9Q8NBP7 692 aaKnown RBP25.5■■□□□ 1.67
SMARCD2-206ENST00000577990 RNF26Q9BY78 433 aaPredicted RBP25.5■■□□□ 1.67
SMARCD2-206ENST00000577990 TXNP10599 105 aaKnown RBP25.49■■□□□ 1.67
SMARCD2-206ENST00000577990 ACLYP53396 1101 aa25.49■■□□□ 1.67
SMARCD2-206ENST00000577990 FSCN1Q16658 493 aaKnown RBP25.49■■□□□ 1.67
SMARCD2-206ENST00000577990 UBE2SQ16763 222 aa25.49■■□□□ 1.67
SMARCD2-206ENST00000577990 SLC26A6Q9BXS9 759 aa25.49■■□□□ 1.67
SMARCD2-206ENST00000577990 TPCN1Q9ULQ1 816 aa25.49■■□□□ 1.67
SMARCD2-206ENST00000577990 A0A1W2PQ45 241 aaPredicted RBP25.48■■□□□ 1.67
SMARCD2-206ENST00000577990 A0A1W2PQY0 241 aa25.48■■□□□ 1.67
SMARCD2-206ENST00000577990 CPLX1O14810 134 aa25.48■■□□□ 1.67
SMARCD2-206ENST00000577990 ARIH2O95376 493 aa25.48■■□□□ 1.67
SMARCD2-206ENST00000577990 NEK4P51957 841 aa25.48■■□□□ 1.67
SMARCD2-206ENST00000577990 BEX3Q00994 111 aa25.48■■□□□ 1.67
SMARCD2-206ENST00000577990 PKN1Q16512 942 aa25.48■■□□□ 1.67
SMARCD2-206ENST00000577990 TEX2Q8IWB9 1127 aa25.48■■□□□ 1.67
SMARCD2-206ENST00000577990 RIC8AQ9NPQ8 531 aa25.48■■□□□ 1.67
SMARCD2-206ENST00000577990 LTBP2Q14767 1821 aa25.48■■□□□ 1.67
SMARCD2-206ENST00000577990 SOX1O00570 391 aaPredicted RBP25.47■■□□□ 1.67
SMARCD2-206ENST00000577990 PPFIA3O75145 1194 aa25.47■■□□□ 1.67
SMARCD2-206ENST00000577990 ASGR1P07306 291 aa25.47■■□□□ 1.67
SMARCD2-206ENST00000577990 ADCY7P51828 1080 aa25.47■■□□□ 1.67
SMARCD2-206ENST00000577990 RTP1P59025 263 aa25.47■■□□□ 1.67
SMARCD2-206ENST00000577990 CCDC62Q6P9F0 684 aa25.47■■□□□ 1.67
SMARCD2-206ENST00000577990 CPLX2Q6PUV4 134 aaKnown RBP25.47■■□□□ 1.67
SMARCD2-206ENST00000577990 SLC39A5Q6ZMH5 540 aa25.47■■□□□ 1.67
SMARCD2-206ENST00000577990 OR6J1Q8NGC5 347 aa25.47■■□□□ 1.67
SMARCD2-206ENST00000577990 C22orf23Q9BZE7 217 aa25.47■■□□□ 1.67
SMARCD2-206ENST00000577990 SLKQ9H2G2 1235 aaPredicted RBP25.47■■□□□ 1.67
SMARCD2-206ENST00000577990 A0A1W2PPC1 479 aa25.46■■□□□ 1.67
SMARCD2-206ENST00000577990 SMCO2A6NFE2 343 aa25.46■■□□□ 1.67
SMARCD2-206ENST00000577990 ZEB2O60315 1214 aa25.46■■□□□ 1.67
SMARCD2-206ENST00000577990 TRIM22Q8IYM9 498 aa25.46■■□□□ 1.67
SMARCD2-206ENST00000577990 CCDC12Q8WUD4 166 aaPredicted RBP25.46■■□□□ 1.67
SMARCD2-206ENST00000577990 COPS5Q92905 334 aa25.46■■□□□ 1.67
SMARCD2-206ENST00000577990 GLT8D2Q9H1C3 349 aa25.46■■□□□ 1.67
SMARCD2-206ENST00000577990 ATP11BQ9Y2G3 1177 aa25.46■■□□□ 1.67
SMARCD2-206ENST00000577990 MRVI1Q9Y6F6 885 aa25.46■■□□□ 1.67
SMARCD2-206ENST00000577990 SPDYE3A6NKU9 549 aa25.45■■□□□ 1.66
SMARCD2-206ENST00000577990 PFKFB2O60825 505 aa25.45■■□□□ 1.66
SMARCD2-206ENST00000577990 STAM2O75886 525 aa25.45■■□□□ 1.66
SMARCD2-206ENST00000577990 RGS20O76081 388 aa25.45■■□□□ 1.66
SMARCD2-206ENST00000577990 BMP8BP34820 402 aa25.45■■□□□ 1.66
SMARCD2-206ENST00000577990 MDM2Q00987 491 aaPredicted RBP25.45■■□□□ 1.66
SMARCD2-206ENST00000577990 SSRP1Q08945 709 aaKnown RBP25.45■■□□□ 1.66
SMARCD2-206ENST00000577990 SCRN1Q12765 414 aa25.45■■□□□ 1.66
SMARCD2-206ENST00000577990 SNX17Q15036 470 aa25.45■■□□□ 1.66
SMARCD2-206ENST00000577990 STARD7Q9NQZ5 370 aa25.45■■□□□ 1.66
SMARCD2-206ENST00000577990 LAMA2P24043 3122 aaKnown RBP25.44■■□□□ 1.66
SMARCD2-206ENST00000577990 RBM25P49756 843 aaKnown RBP25.44■■□□□ 1.66
SMARCD2-206ENST00000577990 CPT1AP50416 773 aa25.44■■□□□ 1.66
SMARCD2-206ENST00000577990 MRPS9P82933 396 aaKnown RBP25.44■■□□□ 1.66
SMARCD2-206ENST00000577990 LY6KQ17RY6 165 aa25.44■■□□□ 1.66
SMARCD2-206ENST00000577990 PCNX4Q63HM2 1172 aa25.44■■□□□ 1.66
SMARCD2-206ENST00000577990 XRRA1Q6P2D8 792 aa25.44■■□□□ 1.66
SMARCD2-206ENST00000577990 LRCH3Q96II8 777 aa25.44■■□□□ 1.66
SMARCD2-206ENST00000577990 ZFP91Q96JP5 570 aaPredicted RBP25.44■■□□□ 1.66
SMARCD2-206ENST00000577990 GLT1D1Q96MS3 346 aa25.44■■□□□ 1.66
SMARCD2-206ENST00000577990 DDX41Q9UJV9 622 aaKnown RBP25.44■■□□□ 1.66
SMARCD2-206ENST00000577990 PCDHA6Q9UN73 950 aa25.44■■□□□ 1.66
SMARCD2-206ENST00000577990 PCDHA8Q9Y5H6 950 aa25.44■■□□□ 1.66
SMARCD2-206ENST00000577990 ESYT2A0FGR8 921 aa25.43■■□□□ 1.66
SMARCD2-206ENST00000577990 GH1P01241 217 aa25.43■■□□□ 1.66
SMARCD2-206ENST00000577990 GNPTABQ3T906 1256 aa25.43■■□□□ 1.66
SMARCD2-206ENST00000577990 C1orf53Q5VUE5 145 aa25.43■■□□□ 1.66
SMARCD2-206ENST00000577990 KCNV1Q6PIU1 500 aa25.43■■□□□ 1.66
SMARCD2-206ENST00000577990 UBE2OQ9C0C9 1292 aaKnown RBP25.43■■□□□ 1.66
SMARCD2-206ENST00000577990 EHMT1Q9H9B1 1298 aa25.43■■□□□ 1.66
SMARCD2-206ENST00000577990 UPF2Q9HAU5 1272 aaKnown RBP25.43■■□□□ 1.66
SMARCD2-206ENST00000577990 ELP1O95163 1332 aa25.42■■□□□ 1.66
SMARCD2-206ENST00000577990 CDKL5O76039 1030 aa25.42■■□□□ 1.66
SMARCD2-206ENST00000577990 TRIM60Q495X7 471 aa25.42■■□□□ 1.66
SMARCD2-206ENST00000577990 BRDTQ58F21 947 aaPredicted RBP25.42■■□□□ 1.66
SMARCD2-206ENST00000577990 CCDC148Q8NFR7 591 aa25.42■■□□□ 1.66
SMARCD2-206ENST00000577990 INPP4AQ96PE3 977 aaPredicted RBP25.42■■□□□ 1.66
SMARCD2-206ENST00000577990 KIF2CQ99661 725 aa25.42■■□□□ 1.66
SMARCD2-206ENST00000577990 ZMYND12Q9H0C1 365 aa25.42■■□□□ 1.66
SMARCD2-206ENST00000577990 CABYRO75952 493 aa25.41■■□□□ 1.66
SMARCD2-206ENST00000577990 DEXIO95424 95 aa25.41■■□□□ 1.66
SMARCD2-206ENST00000577990 FOSP01100 380 aaPredicted RBP25.41■■□□□ 1.66
SMARCD2-206ENST00000577990 ARHGAP1Q07960 439 aa25.41■■□□□ 1.66
SMARCD2-206ENST00000577990 AP3B2Q13367 1082 aa25.41■■□□□ 1.66
SMARCD2-206ENST00000577990 CXCL17Q6UXB2 119 aa25.41■■□□□ 1.66
SMARCD2-206ENST00000577990 VTI1AQ96AJ9 217 aa25.41■■□□□ 1.66
SMARCD2-206ENST00000577990 C6orf50Q9HD87 102 aa25.41■■□□□ 1.66
SMARCD2-206ENST00000577990 RTEL1Q9NZ71 1219 aa25.41■■□□□ 1.66
SMARCD2-206ENST00000577990 A6NJR5 290 aa25.4■■□□□ 1.66
SMARCD2-206ENST00000577990 LARGE1O95461 756 aa25.4■■□□□ 1.66
SMARCD2-206ENST00000577990 CLK2P49760 499 aaKnown RBP25.4■■□□□ 1.66
SMARCD2-206ENST00000577990 ME3Q16798 604 aa25.4■■□□□ 1.66
SMARCD2-206ENST00000577990 ANO3Q9BYT9 981 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms