RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 KRT25Q7Z3Z0 450 aa16.31■□□□□ 0.2
CUEDC1-206ENST00000577830 TRIM58Q8NG06 486 aa16.31■□□□□ 0.2
CUEDC1-206ENST00000577830 OSBPL9Q96SU4 736 aa16.31■□□□□ 0.2
CUEDC1-206ENST00000577830 LSM14BQ9BX40 385 aaKnown RBP16.31■□□□□ 0.2
CUEDC1-206ENST00000577830 NFU1Q9UMS0 254 aa16.31■□□□□ 0.2
CUEDC1-206ENST00000577830 NID2Q14112 1375 aa16.31■□□□□ 0.2
CUEDC1-206ENST00000577830 EP400Q96L91 3159 aa16.31■□□□□ 0.2
CUEDC1-206ENST00000577830 KRT14P02533 472 aa16.31■□□□□ 0.2
CUEDC1-206ENST00000577830 CDK8P49336 464 aa16.31■□□□□ 0.2
CUEDC1-206ENST00000577830 DDX12PQ92771 950 aa16.31■□□□□ 0.2
CUEDC1-206ENST00000577830 COL14A1Q05707 1796 aaKnown RBP16.31■□□□□ 0.2
CUEDC1-206ENST00000577830 HSF2BPO75031 334 aa16.3■□□□□ 0.2
CUEDC1-206ENST00000577830 MIIPQ5JXC2 388 aa16.3■□□□□ 0.2
CUEDC1-206ENST00000577830 LARP4BQ92615 738 aaKnown RBP16.3■□□□□ 0.2
CUEDC1-206ENST00000577830 EPB41L5Q9HCM4 733 aa16.3■□□□□ 0.2
CUEDC1-206ENST00000577830 RBM12Q9NTZ6 932 aaKnown RBP16.3■□□□□ 0.2
CUEDC1-206ENST00000577830 SNX12Q9UMY4 172 aa16.3■□□□□ 0.2
CUEDC1-206ENST00000577830 TMCO5BA8MYB1 307 aa16.3■□□□□ 0.2
CUEDC1-206ENST00000577830 IKQ13123 557 aaPredicted RBP16.3■□□□□ 0.2
CUEDC1-206ENST00000577830 KCNB1Q14721 858 aa16.3■□□□□ 0.2
CUEDC1-206ENST00000577830 PAPD7Q5XG87 772 aaKnown RBP16.3■□□□□ 0.2
CUEDC1-206ENST00000577830 WDR93Q6P2C0 686 aa16.3■□□□□ 0.2
CUEDC1-206ENST00000577830 BARGINQ6ZT62 677 aa16.3■□□□□ 0.2
CUEDC1-206ENST00000577830 KRT12Q99456 494 aa16.3■□□□□ 0.2
CUEDC1-206ENST00000577830 TSG101Q99816 390 aa16.3■□□□□ 0.2
CUEDC1-206ENST00000577830 CCSER1Q9C0I3 900 aa16.3■□□□□ 0.2
CUEDC1-206ENST00000577830 ADAMTS1Q9UHI8 967 aa16.3■□□□□ 0.2
CUEDC1-206ENST00000577830 SALL4Q9UJQ4 1053 aa16.3■□□□□ 0.2
CUEDC1-206ENST00000577830 MYH6P13533 1939 aa16.3■□□□□ 0.2
CUEDC1-206ENST00000577830 TAF1P21675 1872 aa16.3■□□□□ 0.2
CUEDC1-206ENST00000577830 PAPPAQ13219 1627 aa16.3■□□□□ 0.2
CUEDC1-206ENST00000577830 LTBP4Q8N2S1 1624 aa16.3■□□□□ 0.2
CUEDC1-206ENST00000577830 RASA1P20936 1047 aa16.3■□□□□ 0.2
CUEDC1-206ENST00000577830 TUBB4BP68371 445 aa16.3■□□□□ 0.2
CUEDC1-206ENST00000577830 TTC31Q49AM3 519 aaPredicted RBP16.3■□□□□ 0.2
CUEDC1-206ENST00000577830 KCNK18Q7Z418 384 aa16.3■□□□□ 0.2
CUEDC1-206ENST00000577830 ARL8AQ96BM9 186 aa16.3■□□□□ 0.2
CUEDC1-206ENST00000577830 TSPYL1Q9H0U9 437 aa16.3■□□□□ 0.2
CUEDC1-206ENST00000577830 JRKLQ9Y4A0 524 aa16.3■□□□□ 0.2
CUEDC1-206ENST00000577830 COL16A1Q07092 1604 aaPredicted RBP16.29■□□□□ 0.2
CUEDC1-206ENST00000577830 UFL1O94874 794 aa16.29■□□□□ 0.2
CUEDC1-206ENST00000577830 SNAP25P60880 206 aa16.29■□□□□ 0.2
CUEDC1-206ENST00000577830 HERC4Q5GLZ8 1057 aaPredicted RBP16.29■□□□□ 0.2
CUEDC1-206ENST00000577830 TBC1D5Q92609 795 aa16.29■□□□□ 0.2
CUEDC1-206ENST00000577830 CCDC43Q96MW1 224 aaKnown RBP16.29■□□□□ 0.2
CUEDC1-206ENST00000577830 RTCBQ9Y3I0 505 aaKnown RBP16.29■□□□□ 0.2
CUEDC1-206ENST00000577830 H0YHG0 523 aa16.29■□□□□ 0.2
CUEDC1-206ENST00000577830 PCP11498 1178 aaKnown RBP16.29■□□□□ 0.2
CUEDC1-206ENST00000577830 FAM133AQ8N9E0 248 aa16.29■□□□□ 0.2
CUEDC1-206ENST00000577830 ANKRD2Q9GZV1 360 aa16.29■□□□□ 0.2
CUEDC1-206ENST00000577830 LRP6O75581 1613 aa16.29■□□□□ 0.2
CUEDC1-206ENST00000577830 TUBBP07437 444 aa16.28■□□□□ 0.2
CUEDC1-206ENST00000577830 SF3B3Q15393 1217 aaKnown RBP16.28■□□□□ 0.2
CUEDC1-206ENST00000577830 TRADDQ15628 312 aa16.28■□□□□ 0.2
CUEDC1-206ENST00000577830 CCDC170Q8IYT3 715 aa16.28■□□□□ 0.2
CUEDC1-206ENST00000577830 MTMR8Q96EF0 704 aa16.28■□□□□ 0.2
CUEDC1-206ENST00000577830 PSD3Q9NYI0 1048 aa16.28■□□□□ 0.2
CUEDC1-206ENST00000577830 ATP2C2O75185 946 aa16.28■□□□□ 0.2
CUEDC1-206ENST00000577830 RFC4P35249 363 aa16.28■□□□□ 0.2
CUEDC1-206ENST00000577830 TSEN2Q8NCE0 465 aaKnown RBP16.28■□□□□ 0.2
CUEDC1-206ENST00000577830 ARHGEF1Q92888 912 aaKnown RBP16.28■□□□□ 0.2
CUEDC1-206ENST00000577830 CAPS2Q9BXY5 557 aa16.28■□□□□ 0.2
CUEDC1-206ENST00000577830 HYOU1Q9Y4L1 999 aa16.28■□□□□ 0.2
CUEDC1-206ENST00000577830 DOT1LQ8TEK3 1739 aa16.28■□□□□ 0.2
CUEDC1-206ENST00000577830 E9PMD0 336 aa16.28■□□□□ 0.2
CUEDC1-206ENST00000577830 MEIS1O00470 390 aa16.28■□□□□ 0.2
CUEDC1-206ENST00000577830 DCAF17Q5H9S7 520 aaPredicted RBP16.28■□□□□ 0.2
CUEDC1-206ENST00000577830 RNF187Q5TA31 235 aaPredicted RBP16.28■□□□□ 0.2
CUEDC1-206ENST00000577830 TTBK2Q6IQ55 1244 aa16.28■□□□□ 0.2
CUEDC1-206ENST00000577830 KCTD1Q719H9 257 aa16.28■□□□□ 0.2
CUEDC1-206ENST00000577830 CREG2Q8IUH2 290 aa16.28■□□□□ 0.2
CUEDC1-206ENST00000577830 NOX5Q96PH1 765 aa16.28■□□□□ 0.2
CUEDC1-206ENST00000577830 EBAG9O00559 213 aa16.27■□□□□ 0.2
CUEDC1-206ENST00000577830 PALMO75781 387 aa16.27■□□□□ 0.2
CUEDC1-206ENST00000577830 CARSP49589 748 aaKnown RBP16.27■□□□□ 0.2
CUEDC1-206ENST00000577830 KIAA0753Q2KHM9 967 aa16.27■□□□□ 0.2
CUEDC1-206ENST00000577830 DPP8Q6V1X1 898 aaPredicted RBP16.27■□□□□ 0.2
CUEDC1-206ENST00000577830 ADAT2Q7Z6V5 191 aaKnown RBP16.27■□□□□ 0.2
CUEDC1-206ENST00000577830 TRIM31Q9BZY9 425 aa16.27■□□□□ 0.2
CUEDC1-206ENST00000577830 SH2D4AQ9H788 454 aa16.27■□□□□ 0.2
CUEDC1-206ENST00000577830 FAM184BQ9ULE4 1060 aa16.27■□□□□ 0.2
CUEDC1-206ENST00000577830 SHTN1A0MZ66 631 aa16.27■□□□□ 0.2
CUEDC1-206ENST00000577830 FAM196BA6NMK8 535 aa16.27■□□□□ 0.2
CUEDC1-206ENST00000577830 HEXIM1O94992 359 aaKnown RBP16.27■□□□□ 0.2
CUEDC1-206ENST00000577830 GRB10Q13322 594 aa16.27■□□□□ 0.2
CUEDC1-206ENST00000577830 MFSD14BQ5SR56 506 aa16.27■□□□□ 0.2
CUEDC1-206ENST00000577830 FAM196AQ6ZSG2 479 aa16.27■□□□□ 0.2
CUEDC1-206ENST00000577830 MMTAG2Q9BU76 263 aaKnown RBP16.27■□□□□ 0.2
CUEDC1-206ENST00000577830 PACSIN1Q9BY11 444 aa16.27■□□□□ 0.2
CUEDC1-206ENST00000577830 TSGA10Q9BZW7 698 aa16.27■□□□□ 0.2
CUEDC1-206ENST00000577830 BMP2KQ9NSY1 1161 aaPredicted RBP16.27■□□□□ 0.2
CUEDC1-206ENST00000577830 SEPT11Q9NVA2 429 aaKnown RBP16.27■□□□□ 0.2
CUEDC1-206ENST00000577830 NDUFAB1O14561 156 aa16.27■□□□□ 0.19
CUEDC1-206ENST00000577830 BACH1O14867 736 aa16.27■□□□□ 0.19
CUEDC1-206ENST00000577830 ADCY7P51828 1080 aa16.27■□□□□ 0.19
CUEDC1-206ENST00000577830 CFAP58Q5T655 872 aa16.27■□□□□ 0.19
CUEDC1-206ENST00000577830 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.27■□□□□ 0.195e-8■■■■■ 125
CUEDC1-206ENST00000577830 KIAA1024Q9UPX6 916 aa16.27■□□□□ 0.19
CUEDC1-206ENST00000577830 ECM29Q5VYK3 1845 aa16.27■□□□□ 0.19
CUEDC1-206ENST00000577830 MYH13Q9UKX3 1938 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms