RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.65■□□□□ 0.1
COPS3-214ENST00000577246 LINC01553A4QN01 128 aa15.65■□□□□ 0.1
COPS3-214ENST00000577246 FAM86C2PA6NEL3 165 aa15.65■□□□□ 0.1
COPS3-214ENST00000577246 SNHG28P0DPA3 235 aa15.65■□□□□ 0.1
COPS3-214ENST00000577246 SSTR3P32745 418 aaPredicted RBP15.65■□□□□ 0.1
COPS3-214ENST00000577246 NT5C2P49902 561 aa15.65■□□□□ 0.1
COPS3-214ENST00000577246 ARHGAP1Q07960 439 aa15.65■□□□□ 0.1
COPS3-214ENST00000577246 PTPROQ16827 1216 aa15.65■□□□□ 0.1
COPS3-214ENST00000577246 USH1GQ495M9 461 aa15.65■□□□□ 0.1
COPS3-214ENST00000577246 SEPT14Q6ZU15 432 aa15.65■□□□□ 0.1
COPS3-214ENST00000577246 SPRED2Q7Z698 418 aa15.65■□□□□ 0.1
COPS3-214ENST00000577246 TICAM2Q86XR7 235 aa15.65■□□□□ 0.1
COPS3-214ENST00000577246 FAM178BQ8IXR5 827 aa15.65■□□□□ 0.1
COPS3-214ENST00000577246 EMID1Q96A84 441 aaPredicted RBP15.65■□□□□ 0.1
COPS3-214ENST00000577246 EVI5LQ96CN4 794 aa15.65■□□□□ 0.1
COPS3-214ENST00000577246 CTAGE1Q96RT6 745 aa15.65■□□□□ 0.1
COPS3-214ENST00000577246 FAM50BQ9Y247 325 aa15.65■□□□□ 0.1
COPS3-214ENST00000577246 ABCB11O95342 1321 aa15.65■□□□□ 0.1
COPS3-214ENST00000577246 ZMYM6O95789 1325 aa15.65■□□□□ 0.1
COPS3-214ENST00000577246 NBNO60934 754 aa15.64■□□□□ 0.09
COPS3-214ENST00000577246 AMHP03971 560 aa15.64■□□□□ 0.09
COPS3-214ENST00000577246 KCNA5P22460 613 aa15.64■□□□□ 0.09
COPS3-214ENST00000577246 GPNMBQ14956 572 aa15.64■□□□□ 0.09
COPS3-214ENST00000577246 LY6KQ17RY6 165 aa15.64■□□□□ 0.09
COPS3-214ENST00000577246 CSPP1Q1MSJ5 1256 aa15.64■□□□□ 0.09
COPS3-214ENST00000577246 VPS53Q5VIR6 699 aa15.64■□□□□ 0.09
COPS3-214ENST00000577246 CHST3Q7LGC8 479 aa15.64■□□□□ 0.09
COPS3-214ENST00000577246 TMCO2Q7Z6W1 182 aaPredicted RBP15.64■□□□□ 0.09
COPS3-214ENST00000577246 FBXO22Q8NEZ5 403 aa15.64■□□□□ 0.09
COPS3-214ENST00000577246 DHX38Q92620 1227 aaKnown RBP15.64■□□□□ 0.09
COPS3-214ENST00000577246 KAT2BQ92831 832 aa15.64■□□□□ 0.09
COPS3-214ENST00000577246 KHSRPQ92945 711 aaKnown RBP eCLIP15.64■□□□□ 0.093e-8■■■■■ 29
COPS3-214ENST00000577246 SAMD11Q96NU1 681 aa15.64■□□□□ 0.09
COPS3-214ENST00000577246 RNF41Q9H4P4 317 aaPredicted RBP15.64■□□□□ 0.09
COPS3-214ENST00000577246 COL4A4P53420 1690 aaPredicted RBP15.63■□□□□ 0.09
COPS3-214ENST00000577246 F2P00734 622 aa15.63■□□□□ 0.09
COPS3-214ENST00000577246 FGAP02671 866 aa15.63■□□□□ 0.09
COPS3-214ENST00000577246 PSEN2P49810 448 aa15.63■□□□□ 0.09
COPS3-214ENST00000577246 LAMC2Q13753 1193 aa15.63■□□□□ 0.09
COPS3-214ENST00000577246 MFSD10Q14728 455 aa15.63■□□□□ 0.09
COPS3-214ENST00000577246 TIGD5Q53EQ6 642 aa15.63■□□□□ 0.09
COPS3-214ENST00000577246 PTCRAQ6ISU1 281 aaPredicted RBP15.63■□□□□ 0.09
COPS3-214ENST00000577246 MFSD6Q6ZSS7 791 aa15.63■□□□□ 0.09
COPS3-214ENST00000577246 PPTC7Q8NI37 304 aa15.63■□□□□ 0.09
COPS3-214ENST00000577246 MRPL38Q96DV4 380 aaKnown RBP15.63■□□□□ 0.09
COPS3-214ENST00000577246 RMDN3Q96TC7 470 aa15.63■□□□□ 0.09
COPS3-214ENST00000577246 HDAC6Q9UBN7 1215 aa15.63■□□□□ 0.09
COPS3-214ENST00000577246 MRVI1Q9Y6F6 885 aa15.63■□□□□ 0.09
COPS3-214ENST00000577246 LGR5O75473 907 aa15.62■□□□□ 0.09
COPS3-214ENST00000577246 EIF3JO75822 258 aaKnown RBP15.62■□□□□ 0.09
COPS3-214ENST00000577246 CDC37Q16543 378 aaPredicted RBP15.62■□□□□ 0.09
COPS3-214ENST00000577246 KIAA0753Q2KHM9 967 aa15.62■□□□□ 0.09
COPS3-214ENST00000577246 MCMDC2Q4G0Z9 681 aa15.62■□□□□ 0.09
COPS3-214ENST00000577246 CCDC178Q5BJE1 867 aa15.62■□□□□ 0.09
COPS3-214ENST00000577246 ARHGEF16Q5VV41 709 aa15.62■□□□□ 0.09
COPS3-214ENST00000577246 FAM117BQ6P1L5 589 aa15.62■□□□□ 0.09
COPS3-214ENST00000577246 DHX37Q8IY37 1157 aaKnown RBP15.62■□□□□ 0.09
COPS3-214ENST00000577246 SYTL5Q8TDW5 730 aaPredicted RBP15.62■□□□□ 0.09
COPS3-214ENST00000577246 ESR2Q92731 530 aa15.62■□□□□ 0.09
COPS3-214ENST00000577246 ALG1Q9BT22 464 aa15.62■□□□□ 0.09
COPS3-214ENST00000577246 CD320Q9NPF0 282 aa15.62■□□□□ 0.09
COPS3-214ENST00000577246 MRPL11Q9Y3B7 192 aaKnown RBP15.62■□□□□ 0.09
COPS3-214ENST00000577246 ZNF618Q5T7W0 954 aa15.61■□□□□ 0.09
COPS3-214ENST00000577246 KCNV1Q6PIU1 500 aa15.61■□□□□ 0.09
COPS3-214ENST00000577246 DGKHQ86XP1 1220 aa15.61■□□□□ 0.09
COPS3-214ENST00000577246 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.61■□□□□ 0.09
COPS3-214ENST00000577246 OTUD7AQ8TE49 926 aaPredicted RBP15.61■□□□□ 0.09
COPS3-214ENST00000577246 TAAR1Q96RJ0 339 aa15.61■□□□□ 0.09
COPS3-214ENST00000577246 UIMC1Q96RL1 719 aa15.61■□□□□ 0.09
COPS3-214ENST00000577246 KCNH6Q9H252 994 aa15.61■□□□□ 0.09
COPS3-214ENST00000577246 DDX41Q9UJV9 622 aaKnown RBP15.61■□□□□ 0.09
COPS3-214ENST00000577246 GRXCR2A6NFK2 248 aa15.6■□□□□ 0.09
COPS3-214ENST00000577246 HAS3O00219 553 aa15.6■□□□□ 0.09
COPS3-214ENST00000577246 PPFIA4O75335 1185 aa15.6■□□□□ 0.09
COPS3-214ENST00000577246 HSPD1P10809 573 aaKnown RBP15.6■□□□□ 0.09
COPS3-214ENST00000577246 MFAP1P55081 439 aaKnown RBP15.6■□□□□ 0.09
COPS3-214ENST00000577246 IQCA1Q86XH1 822 aa15.6■□□□□ 0.09
COPS3-214ENST00000577246 MYOCDQ8IZQ8 938 aa15.6■□□□□ 0.09
COPS3-214ENST00000577246 RSPH10B2B2RC85 870 aa15.59■□□□□ 0.09
COPS3-214ENST00000577246 DCXO43602 365 aa15.59■□□□□ 0.09
COPS3-214ENST00000577246 RSPH10BP0C881 870 aa15.59■□□□□ 0.09
COPS3-214ENST00000577246 ZNF286BP0CG31 522 aa15.59■□□□□ 0.09
COPS3-214ENST00000577246 GOLGA8HP0CJ92 632 aa15.59■□□□□ 0.09
COPS3-214ENST00000577246 IL9P15248 144 aa15.59■□□□□ 0.09
COPS3-214ENST00000577246 HAND2P61296 217 aa15.59■□□□□ 0.09
COPS3-214ENST00000577246 HTRA4P83105 476 aaPredicted RBP15.59■□□□□ 0.09
COPS3-214ENST00000577246 TRIM71Q2Q1W2 868 aaKnown RBP15.59■□□□□ 0.09
COPS3-214ENST00000577246 ASPRV1Q53RT3 343 aa15.59■□□□□ 0.09
COPS3-214ENST00000577246 ALYREFQ86V81 257 aaKnown RBP15.59■□□□□ 0.09
COPS3-214ENST00000577246 PNMA1Q8ND90 353 aa15.59■□□□□ 0.09
COPS3-214ENST00000577246 NEK9Q8TD19 979 aa15.59■□□□□ 0.09
COPS3-214ENST00000577246 SP7Q8TDD2 431 aaPredicted RBP15.59■□□□□ 0.09
COPS3-214ENST00000577246 YME1L1Q96TA2 773 aa15.59■□□□□ 0.09
COPS3-214ENST00000577246 C17orf80Q9BSJ5 609 aa15.59■□□□□ 0.09
COPS3-214ENST00000577246 UBA5Q9GZZ9 404 aa15.59■□□□□ 0.09
COPS3-214ENST00000577246 KAT14Q9H8E8 782 aa15.59■□□□□ 0.09
COPS3-214ENST00000577246 PRKAG3Q9UGI9 489 aa15.59■□□□□ 0.09
COPS3-214ENST00000577246 NCK2O43639 380 aa15.58■□□□□ 0.08
COPS3-214ENST00000577246 DHX16O60231 1041 aaKnown RBP15.58■□□□□ 0.08
COPS3-214ENST00000577246 CAND2O75155 1236 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms