RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 TSPY2A6NKD2 308 aa16.03■□□□□ 0.16
SCARF1-209ENST00000576012 RAPGEF1Q13905 1077 aa16.03■□□□□ 0.16
SCARF1-209ENST00000576012 TMEM132AQ24JP5 1023 aa16.03■□□□□ 0.16
SCARF1-209ENST00000576012 NBPF9Q3BBW0 867 aa16.03■□□□□ 0.16
SCARF1-209ENST00000576012 GIMAP8Q8ND71 665 aaPredicted RBP16.03■□□□□ 0.16
SCARF1-209ENST00000576012 TBC1D5Q92609 795 aa16.03■□□□□ 0.16
SCARF1-209ENST00000576012 PURBQ96QR8 312 aaKnown RBP16.03■□□□□ 0.16
SCARF1-209ENST00000576012 DDX47Q9H0S4 455 aaKnown RBP16.03■□□□□ 0.16
SCARF1-209ENST00000576012 GOPCQ9HD26 462 aa16.03■□□□□ 0.16
SCARF1-209ENST00000576012 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.03■□□□□ 0.16
SCARF1-209ENST00000576012 FAM107AO95990 144 aa16.02■□□□□ 0.16
SCARF1-209ENST00000576012 CCNE1P24864 410 aa16.02■□□□□ 0.16
SCARF1-209ENST00000576012 KIAA0753Q2KHM9 967 aa16.02■□□□□ 0.16
SCARF1-209ENST00000576012 DZIP3Q86Y13 1208 aaKnown RBP16.02■□□□□ 0.16
SCARF1-209ENST00000576012 USP54Q70EL1 1684 aa16.02■□□□□ 0.16
SCARF1-209ENST00000576012 UPP2O95045 317 aa16.02■□□□□ 0.16
SCARF1-209ENST00000576012 ARID4AP29374 1257 aaPredicted RBP16.02■□□□□ 0.16
SCARF1-209ENST00000576012 MAGOHP61326 146 aaKnown RBP16.02■□□□□ 0.16
SCARF1-209ENST00000576012 NAIF1Q69YI7 327 aaPredicted RBP16.02■□□□□ 0.16
SCARF1-209ENST00000576012 CABP7Q86V35 215 aa16.02■□□□□ 0.16
SCARF1-209ENST00000576012 FAM228AQ86W67 206 aa16.02■□□□□ 0.16
SCARF1-209ENST00000576012 MAGOHBQ96A72 148 aaKnown RBP16.02■□□□□ 0.16
SCARF1-209ENST00000576012 SEMA6BQ9H3T3 888 aa16.02■□□□□ 0.16
SCARF1-209ENST00000576012 CNOT8Q9UFF9 292 aaKnown RBP16.02■□□□□ 0.16
SCARF1-209ENST00000576012 PLAGL2Q9UPG8 496 aa16.02■□□□□ 0.16
SCARF1-209ENST00000576012 GMNCA6NCL1 334 aa16.02■□□□□ 0.15
SCARF1-209ENST00000576012 CCNT1O60563 726 aaKnown RBP16.02■□□□□ 0.15
SCARF1-209ENST00000576012 SMTNP53814 917 aa16.02■□□□□ 0.15
SCARF1-209ENST00000576012 POLR2FP61218 127 aaKnown RBP16.02■□□□□ 0.15
SCARF1-209ENST00000576012 ITGB3BPQ13352 177 aaPredicted RBP16.02■□□□□ 0.15
SCARF1-209ENST00000576012 FUKQ8N0W3 1084 aa16.02■□□□□ 0.15
SCARF1-209ENST00000576012 NLRP3Q96P20 1036 aa16.02■□□□□ 0.15
SCARF1-209ENST00000576012 TACO1Q9BSH4 297 aaKnown RBP16.02■□□□□ 0.15
SCARF1-209ENST00000576012 CCDC113Q9H0I3 377 aa16.02■□□□□ 0.15
SCARF1-209ENST00000576012 LEMD3Q9Y2U8 911 aa16.02■□□□□ 0.15
SCARF1-209ENST00000576012 L3MBTL1Q9Y468 752 aa16.02■□□□□ 0.15
SCARF1-209ENST00000576012 CNTNAP5Q8WYK1 1306 aa16.02■□□□□ 0.15
SCARF1-209ENST00000576012 TRPM3Q9HCF6 1732 aaPredicted RBP16.01■□□□□ 0.15
SCARF1-209ENST00000576012 EZRP15311 586 aaKnown RBP16.01■□□□□ 0.15
SCARF1-209ENST00000576012 HSD17B3P37058 310 aa16.01■□□□□ 0.15
SCARF1-209ENST00000576012 TXKP42681 527 aa16.01■□□□□ 0.15
SCARF1-209ENST00000576012 KRT71Q3SY84 523 aa16.01■□□□□ 0.15
SCARF1-209ENST00000576012 FAM133BQ5BKY9 247 aaKnown RBP16.01■□□□□ 0.15
SCARF1-209ENST00000576012 KSR1Q8IVT5 923 aa16.01■□□□□ 0.15
SCARF1-209ENST00000576012 MARCH10Q8NA82 808 aaPredicted RBP16.01■□□□□ 0.15
SCARF1-209ENST00000576012 MIEF2Q96C03 454 aa16.01■□□□□ 0.15
SCARF1-209ENST00000576012 ZHX3Q9H4I2 956 aa16.01■□□□□ 0.15
SCARF1-209ENST00000576012 MCM8Q9UJA3 840 aa16.01■□□□□ 0.15
SCARF1-209ENST00000576012 EPB41P11171 864 aaKnown RBP16.01■□□□□ 0.15
SCARF1-209ENST00000576012 LONP1P36776 959 aaKnown RBP16.01■□□□□ 0.15
SCARF1-209ENST00000576012 CACNB1Q02641 598 aaPredicted RBP16.01■□□□□ 0.15
SCARF1-209ENST00000576012 VWA3BQ502W6 1294 aa16.01■□□□□ 0.15
SCARF1-209ENST00000576012 CAVIN3Q969G5 261 aa16.01■□□□□ 0.15
SCARF1-209ENST00000576012 GJA10Q969M2 543 aa16.01■□□□□ 0.15
SCARF1-209ENST00000576012 CCDC47Q96A33 483 aaKnown RBP16.01■□□□□ 0.15
SCARF1-209ENST00000576012 SELENOSQ9BQE4 189 aa16.01■□□□□ 0.15
SCARF1-209ENST00000576012 NEUROG2Q9H2A3 272 aa16.01■□□□□ 0.15
SCARF1-209ENST00000576012 MYO5AQ9Y4I1 1855 aaKnown RBP16.01■□□□□ 0.15
SCARF1-209ENST00000576012 COPB2P35606 906 aa16■□□□□ 0.15
SCARF1-209ENST00000576012 IFFO1Q0D2I5 559 aa16■□□□□ 0.15
SCARF1-209ENST00000576012 NELFCDQ8IXH7 590 aa16■□□□□ 0.15
SCARF1-209ENST00000576012 SEC16BQ96JE7 1060 aa16■□□□□ 0.15
SCARF1-209ENST00000576012 CELF4Q9BZC1 486 aaKnown RBP16■□□□□ 0.15
SCARF1-209ENST00000576012 TCP11L1Q9NUJ3 509 aa16■□□□□ 0.15
SCARF1-209ENST00000576012 RASSF9O75901 435 aa16■□□□□ 0.15
SCARF1-209ENST00000576012 IFNAR2P48551 515 aa16■□□□□ 0.15
SCARF1-209ENST00000576012 ERVK-9P63128 1117 aa16■□□□□ 0.15
SCARF1-209ENST00000576012 PRPF4BQ13523 1007 aaKnown RBP16■□□□□ 0.15
SCARF1-209ENST00000576012 MSL1Q68DK7 614 aa16■□□□□ 0.15
SCARF1-209ENST00000576012 TBC1D1Q86TI0 1168 aaPredicted RBP16■□□□□ 0.15
SCARF1-209ENST00000576012 TAF4BQ92750 862 aa16■□□□□ 0.15
SCARF1-209ENST00000576012 TRIM9Q9C026 710 aa16■□□□□ 0.15
SCARF1-209ENST00000576012 FBXL5Q9UKA1 691 aa16■□□□□ 0.15
SCARF1-209ENST00000576012 RHOBTB3O94955 611 aa16■□□□□ 0.15
SCARF1-209ENST00000576012 MYO1EQ12965 1108 aa16■□□□□ 0.15
SCARF1-209ENST00000576012 MKRN4PQ13434 485 aaPredicted RBP16■□□□□ 0.15
SCARF1-209ENST00000576012 CACNA2D3Q8IZS8 1091 aa16■□□□□ 0.15
SCARF1-209ENST00000576012 FAM133AQ8N9E0 248 aa16■□□□□ 0.15
SCARF1-209ENST00000576012 KIAA0895Q8NCT3 520 aa16■□□□□ 0.15
SCARF1-209ENST00000576012 TMOD3Q9NYL9 352 aa16■□□□□ 0.15
SCARF1-209ENST00000576012 AMACRQ9UHK6 382 aa15.99■□□□□ 0.15
SCARF1-209ENST00000576012 STX8Q9UNK0 236 aa15.99■□□□□ 0.15
SCARF1-209ENST00000576012 TNS3Q68CZ2 1445 aa15.99■□□□□ 0.15
SCARF1-209ENST00000576012 XIRP1Q702N8 1843 aaKnown RBP15.99■□□□□ 0.15
SCARF1-209ENST00000576012 DAPK3O43293 454 aa15.99■□□□□ 0.15
SCARF1-209ENST00000576012 MYBL1P10243 752 aa15.99■□□□□ 0.15
SCARF1-209ENST00000576012 SCTRP47872 440 aa15.99■□□□□ 0.15
SCARF1-209ENST00000576012 PREPLQ4J6C6 727 aaPredicted RBP15.99■□□□□ 0.15
SCARF1-209ENST00000576012 MAEAQ7L5Y9 396 aa15.99■□□□□ 0.15
SCARF1-209ENST00000576012 RAPGEF5Q92565 580 aa15.99■□□□□ 0.15
SCARF1-209ENST00000576012 BICDL2A1A5D9 508 aa15.99■□□□□ 0.15
SCARF1-209ENST00000576012 BUB1BO60566 1050 aaPredicted RBP15.99■□□□□ 0.15
SCARF1-209ENST00000576012 GNAT2P19087 354 aa15.99■□□□□ 0.15
SCARF1-209ENST00000576012 GIGYF2Q6Y7W6 1299 aaKnown RBP15.99■□□□□ 0.15
SCARF1-209ENST00000576012 FAM114A1Q8IWE2 563 aa15.99■□□□□ 0.15
SCARF1-209ENST00000576012 C4orf32Q8N8J7 132 aa15.99■□□□□ 0.15
SCARF1-209ENST00000576012 HVCN1Q96D96 273 aa15.99■□□□□ 0.15
SCARF1-209ENST00000576012 DHTKD1Q96HY7 919 aaPredicted RBP15.99■□□□□ 0.15
SCARF1-209ENST00000576012 ATP8A1Q9Y2Q0 1164 aa15.99■□□□□ 0.15
SCARF1-209ENST00000576012 SLIT3O75094 1523 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms