RNA–Protein interactions for RNA: ENST00000575483.5

CDC27-217, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-217ENST00000575483 RABGGTBP53611 331 aa16.29■□□□□ 0.2
CDC27-217ENST00000575483 RPUSD2Q8IZ73 545 aaKnown RBP16.29■□□□□ 0.2
CDC27-217ENST00000575483 ADGRF4Q8IZF3 695 aa16.29■□□□□ 0.2
CDC27-217ENST00000575483 SYTL5Q8TDW5 730 aaPredicted RBP16.29■□□□□ 0.2
CDC27-217ENST00000575483 ZSCAN10Q96SZ4 725 aaPredicted RBP16.29■□□□□ 0.2
CDC27-217ENST00000575483 DSCC1Q9BVC3 393 aa16.29■□□□□ 0.2
CDC27-217ENST00000575483 RWDD1Q9H446 243 aaPredicted RBP16.29■□□□□ 0.2
CDC27-217ENST00000575483 ZSWIM5Q9P217 1185 aa16.29■□□□□ 0.2
CDC27-217ENST00000575483 MSRAQ9UJ68 235 aa16.29■□□□□ 0.2
CDC27-217ENST00000575483 BAZ2BQ9UIF8 2168 aaKnown RBP16.28■□□□□ 0.2
CDC27-217ENST00000575483 ABCB11O95342 1321 aa16.28■□□□□ 0.2
CDC27-217ENST00000575483 OPLAHO14841 1288 aa16.28■□□□□ 0.2
CDC27-217ENST00000575483 KPNA6O60684 536 aa16.28■□□□□ 0.2
CDC27-217ENST00000575483 PFKMP08237 780 aa16.28■□□□□ 0.2
CDC27-217ENST00000575483 TXNP10599 105 aaKnown RBP16.28■□□□□ 0.2
CDC27-217ENST00000575483 MYOGP15173 224 aa16.28■□□□□ 0.2
CDC27-217ENST00000575483 GHRHRQ02643 423 aa16.28■□□□□ 0.2
CDC27-217ENST00000575483 ARHGAP1Q07960 439 aa16.28■□□□□ 0.2
CDC27-217ENST00000575483 QRICH1Q2TAL8 776 aa16.28■□□□□ 0.2
CDC27-217ENST00000575483 ASPRV1Q53RT3 343 aa16.28■□□□□ 0.2
CDC27-217ENST00000575483 TJAP1Q5JTD0 557 aa16.28■□□□□ 0.2
CDC27-217ENST00000575483 TAAR1Q96RJ0 339 aa16.28■□□□□ 0.2
CDC27-217ENST00000575483 GAS2L1Q99501 681 aaPredicted RBP16.28■□□□□ 0.2
CDC27-217ENST00000575483 MFRPQ9BY79 579 aa16.28■□□□□ 0.2
CDC27-217ENST00000575483 JMJD4Q9H9V9 463 aa16.28■□□□□ 0.2
CDC27-217ENST00000575483 PCDHA11Q9Y5I1 949 aa16.28■□□□□ 0.2
CDC27-217ENST00000575483 SLC4A7Q9Y6M7 1214 aa16.28■□□□□ 0.2
CDC27-217ENST00000575483 BRWD1Q9NSI6 2320 aa16.28■□□□□ 0.2
CDC27-217ENST00000575483 RAD50Q92878 1312 aa16.27■□□□□ 0.2
CDC27-217ENST00000575483 PTPN11Q06124 597 aaPredicted RBP16.27■□□□□ 0.2
CDC27-217ENST00000575483 GPNMBQ14956 572 aa16.27■□□□□ 0.2
CDC27-217ENST00000575483 IQCA1Q86XH1 822 aa16.27■□□□□ 0.2
CDC27-217ENST00000575483 KAT2BQ92831 832 aa16.27■□□□□ 0.2
CDC27-217ENST00000575483 SLC28A3Q9HAS3 691 aa16.27■□□□□ 0.2
CDC27-217ENST00000575483 MMP3P08254 477 aa16.26■□□□□ 0.19
CDC27-217ENST00000575483 IQCF3P0C7M6 154 aa16.26■□□□□ 0.19
CDC27-217ENST00000575483 ATP2A2P16615 1042 aaKnown RBP16.26■□□□□ 0.19
CDC27-217ENST00000575483 SEC23AQ15436 765 aa16.26■□□□□ 0.19
CDC27-217ENST00000575483 SLC35G1Q2M3R5 365 aa16.26■□□□□ 0.19
CDC27-217ENST00000575483 CCDC178Q5BJE1 867 aa16.26■□□□□ 0.19
CDC27-217ENST00000575483 SESTD1Q86VW0 696 aa16.26■□□□□ 0.19
CDC27-217ENST00000575483 PDCD7Q8N8D1 485 aaKnown RBP16.26■□□□□ 0.19
CDC27-217ENST00000575483 EXOC6Q8TAG9 804 aa16.26■□□□□ 0.19
CDC27-217ENST00000575483 AFG1LQ8WV93 481 aa16.26■□□□□ 0.19
CDC27-217ENST00000575483 SYMPKQ92797 1274 aaKnown RBP16.26■□□□□ 0.19
CDC27-217ENST00000575483 MTMR8Q96EF0 704 aa16.26■□□□□ 0.19
CDC27-217ENST00000575483 MPHOSPH6Q99547 160 aaKnown RBP16.26■□□□□ 0.19
CDC27-217ENST00000575483 KAT14Q9H8E8 782 aa16.26■□□□□ 0.19
CDC27-217ENST00000575483 GPHNQ9NQX3 736 aaPredicted RBP16.26■□□□□ 0.19
CDC27-217ENST00000575483 DIAPH3Q9NSV4 1193 aa16.26■□□□□ 0.19
CDC27-217ENST00000575483 COL4A4P53420 1690 aaPredicted RBP16.25■□□□□ 0.19
CDC27-217ENST00000575483 PPP1R11O60927 126 aaPredicted RBP16.25■□□□□ 0.19
CDC27-217ENST00000575483 ARHGEF15O94989 841 aa16.25■□□□□ 0.19
CDC27-217ENST00000575483 RFC2P35250 354 aa16.25■□□□□ 0.19
CDC27-217ENST00000575483 LY6KQ17RY6 165 aa16.25■□□□□ 0.19
CDC27-217ENST00000575483 BRDTQ58F21 947 aaPredicted RBP16.25■□□□□ 0.19
CDC27-217ENST00000575483 FAM47CQ5HY64 1035 aa16.25■□□□□ 0.19
CDC27-217ENST00000575483 DEFB128Q7Z7B8 93 aa16.25■□□□□ 0.19
CDC27-217ENST00000575483 STAG2Q8N3U4 1231 aa16.25■□□□□ 0.19
CDC27-217ENST00000575483 NSUN6Q8TEA1 469 aaKnown RBP16.25■□□□□ 0.19
CDC27-217ENST00000575483 ATXN2LQ8WWM7 1075 aaKnown RBP16.25■□□□□ 0.19
CDC27-217ENST00000575483 DHX38Q92620 1227 aaKnown RBP16.25■□□□□ 0.19
CDC27-217ENST00000575483 IWS1Q96ST2 819 aa16.25■□□□□ 0.19
CDC27-217ENST00000575483 B4DLN1 442 aa16.24■□□□□ 0.19
CDC27-217ENST00000575483 HIP1O00291 1037 aa16.24■□□□□ 0.19
CDC27-217ENST00000575483 GSPT1P15170 499 aaKnown RBP16.24■□□□□ 0.19
CDC27-217ENST00000575483 HSD17B4P51659 736 aa16.24■□□□□ 0.19
CDC27-217ENST00000575483 MRPL12P52815 198 aaKnown RBP16.24■□□□□ 0.19
CDC27-217ENST00000575483 RBL2Q08999 1139 aa16.24■□□□□ 0.19
CDC27-217ENST00000575483 IMMTQ16891 758 aaKnown RBP16.24■□□□□ 0.19
CDC27-217ENST00000575483 PPP2R2DQ66LE6 453 aa16.24■□□□□ 0.19
CDC27-217ENST00000575483 GDF6Q6KF10 455 aaPredicted RBP16.24■□□□□ 0.19
CDC27-217ENST00000575483 FBXO22Q8NEZ5 403 aa16.24■□□□□ 0.19
CDC27-217ENST00000575483 PPM1EQ8WY54 764 aa16.24■□□□□ 0.19
CDC27-217ENST00000575483 EMID1Q96A84 441 aaPredicted RBP16.24■□□□□ 0.19
CDC27-217ENST00000575483 RMDN3Q96TC7 470 aa16.24■□□□□ 0.19
CDC27-217ENST00000575483 THEGQ9P2T0 379 aa16.24■□□□□ 0.19
CDC27-217ENST00000575483 DDX41Q9UJV9 622 aaKnown RBP16.24■□□□□ 0.19
CDC27-217ENST00000575483 ZBBXA8MT70 800 aa16.23■□□□□ 0.19
CDC27-217ENST00000575483 RBAK-RBAKDNI3L0D1 243 aa16.23■□□□□ 0.19
CDC27-217ENST00000575483 RGS20O76081 388 aa16.23■□□□□ 0.19
CDC27-217ENST00000575483 GH1P01241 217 aa16.23■□□□□ 0.19
CDC27-217ENST00000575483 PARP1P09874 1014 aaKnown RBP16.23■□□□□ 0.19
CDC27-217ENST00000575483 HOXD8P13378 290 aaPredicted RBP16.23■□□□□ 0.19
CDC27-217ENST00000575483 POU3F3P20264 500 aaPredicted RBP16.23■□□□□ 0.19
CDC27-217ENST00000575483 PDE4AP27815 886 aa16.23■□□□□ 0.19
CDC27-217ENST00000575483 SEPT14Q6ZU15 432 aa16.23■□□□□ 0.19
CDC27-217ENST00000575483 CYB5R4Q7L1T6 521 aa16.23■□□□□ 0.19
CDC27-217ENST00000575483 FBXO11Q86XK2 927 aa16.23■□□□□ 0.19
CDC27-217ENST00000575483 MCF2L2Q86YR7 1114 aa16.23■□□□□ 0.19
CDC27-217ENST00000575483 ASB2Q96Q27 587 aa16.23■□□□□ 0.19
CDC27-217ENST00000575483 KRT23Q9C075 422 aa16.23■□□□□ 0.19
CDC27-217ENST00000575483 PXMP2Q9NR77 195 aa16.23■□□□□ 0.19
CDC27-217ENST00000575483 RYDENQ9NUL5 291 aaKnown RBP16.23■□□□□ 0.19
CDC27-217ENST00000575483 TCF20Q9UGU0 1960 aaKnown RBP16.22■□□□□ 0.19
CDC27-217ENST00000575483 EPOPA6NHQ4 379 aa16.22■□□□□ 0.19
CDC27-217ENST00000575483 CA3P07451 260 aa16.22■□□□□ 0.19
CDC27-217ENST00000575483 EIF2AK2P19525 551 aaKnown RBP16.22■□□□□ 0.19
CDC27-217ENST00000575483 IGFBP4P22692 258 aa16.22■□□□□ 0.19
CDC27-217ENST00000575483 BFSP2Q13515 415 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms