RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 SIAH1Q8IUQ4 282 aa7.59□□□□□ -1.19
SMG6-217ENST00000575338 TMTC1Q8IUR5 882 aa7.59□□□□□ -1.19
SMG6-217ENST00000575338 TXLNBQ8N3L3 684 aa7.59□□□□□ -1.19
SMG6-217ENST00000575338 CSGALNACT2Q8N6G5 542 aa7.59□□□□□ -1.19
SMG6-217ENST00000575338 PRPF38AQ8NAV1 312 aaKnown RBP7.59□□□□□ -1.19
SMG6-217ENST00000575338 ZNF397Q8NF99 534 aaPredicted RBP7.59□□□□□ -1.19
SMG6-217ENST00000575338 NEK9Q8TD19 979 aa7.59□□□□□ -1.19
SMG6-217ENST00000575338 STAMQ92783 540 aa7.59□□□□□ -1.19
SMG6-217ENST00000575338 MTRQ99707 1265 aa7.59□□□□□ -1.19
SMG6-217ENST00000575338 SRRTQ9BXP5 876 aaKnown RBP7.59□□□□□ -1.19
SMG6-217ENST00000575338 WDR11Q9BZH6 1224 aa7.59□□□□□ -1.19
SMG6-217ENST00000575338 DEFB129Q9H1M3 183 aa7.59□□□□□ -1.19
SMG6-217ENST00000575338 RANBP17Q9H2T7 1088 aaKnown RBP7.59□□□□□ -1.19
SMG6-217ENST00000575338 TMX1Q9H3N1 280 aa7.59□□□□□ -1.19
SMG6-217ENST00000575338 ZNHIT6Q9NWK9 470 aaKnown RBP7.59□□□□□ -1.19
SMG6-217ENST00000575338 DNM3Q9UQ16 869 aa7.59□□□□□ -1.19
SMG6-217ENST00000575338 PCDHAC2Q9Y5I4 1007 aa7.59□□□□□ -1.19
SMG6-217ENST00000575338 PPP2R3BQ9Y5P8 575 aa7.59□□□□□ -1.19
SMG6-217ENST00000575338 PARP14Q460N5 1801 aa7.59□□□□□ -1.19
SMG6-217ENST00000575338 SRCAPQ6ZRS2 3230 aa7.59□□□□□ -1.19
SMG6-217ENST00000575338 PHLPP2Q6ZVD8 1323 aa7.58□□□□□ -1.2
SMG6-217ENST00000575338 POTEMA6NI47 508 aa7.58□□□□□ -1.2
SMG6-217ENST00000575338 LGALS16A8MUM7 142 aa7.58□□□□□ -1.2
SMG6-217ENST00000575338 USP17L15C9J2P7 530 aa7.58□□□□□ -1.2
SMG6-217ENST00000575338 USP17L13C9JLJ4 530 aa7.58□□□□□ -1.2
SMG6-217ENST00000575338 USP17L11C9JVI0 530 aa7.58□□□□□ -1.2
SMG6-217ENST00000575338 USP17L18D6R9N7 530 aa7.58□□□□□ -1.2
SMG6-217ENST00000575338 USP17L22D6RA61 530 aa7.58□□□□□ -1.2
SMG6-217ENST00000575338 USP17L17D6RBQ6 530 aa7.58□□□□□ -1.2
SMG6-217ENST00000575338 USP17L19D6RCP7 530 aa7.58□□□□□ -1.2
SMG6-217ENST00000575338 USP17L20D6RJB6 530 aa7.58□□□□□ -1.2
SMG6-217ENST00000575338 ADAMTS3O15072 1205 aa7.58□□□□□ -1.2
SMG6-217ENST00000575338 IPO7O95373 1038 aaKnown RBP7.58□□□□□ -1.2
SMG6-217ENST00000575338 KRT18P05783 430 aaKnown RBP7.58□□□□□ -1.2
SMG6-217ENST00000575338 CCDC175P0C221 793 aa7.58□□□□□ -1.2
SMG6-217ENST00000575338 RPA1P27694 616 aa7.58□□□□□ -1.2
SMG6-217ENST00000575338 UBXN1Q04323 297 aa7.58□□□□□ -1.2
SMG6-217ENST00000575338 USP17L24Q0WX57 530 aa7.58□□□□□ -1.2
SMG6-217ENST00000575338 KRT31Q15323 416 aa7.58□□□□□ -1.2
SMG6-217ENST00000575338 CENPPQ6IPU0 288 aa7.58□□□□□ -1.2
SMG6-217ENST00000575338 USP17L6PQ6QN14 398 aa7.58□□□□□ -1.2
SMG6-217ENST00000575338 ARHGAP27Q6ZUM4 889 aa7.58□□□□□ -1.2
SMG6-217ENST00000575338 NYAP1Q6ZVC0 841 aa7.58□□□□□ -1.2
SMG6-217ENST00000575338 STXBP4Q6ZWJ1 553 aa7.58□□□□□ -1.2
SMG6-217ENST00000575338 CCDC84Q86UT8 332 aaPredicted RBP7.58□□□□□ -1.2
SMG6-217ENST00000575338 SMYD4Q8IYR2 804 aaPredicted RBP7.58□□□□□ -1.2
SMG6-217ENST00000575338 MYOCDQ8IZQ8 938 aa7.58□□□□□ -1.2
SMG6-217ENST00000575338 CRYGNQ8WXF5 182 aa7.58□□□□□ -1.2
SMG6-217ENST00000575338 NUP88Q99567 741 aaPredicted RBP7.58□□□□□ -1.2
SMG6-217ENST00000575338 MMTAG2Q9BU76 263 aaKnown RBP7.58□□□□□ -1.2
SMG6-217ENST00000575338 POLR3CQ9BUI4 534 aaPredicted RBP7.58□□□□□ -1.2
SMG6-217ENST00000575338 ZNF341Q9BYN7 854 aa7.58□□□□□ -1.2
SMG6-217ENST00000575338 KIAA1683Q9H0B3 1180 aa7.58□□□□□ -1.2
SMG6-217ENST00000575338 TUFT1Q9NNX1 390 aa7.58□□□□□ -1.2
SMG6-217ENST00000575338 KCND2Q9NZV8 630 aa7.58□□□□□ -1.2
SMG6-217ENST00000575338 TCEAL9Q9UHQ7 104 aa7.58□□□□□ -1.2
SMG6-217ENST00000575338 ZBTB12Q9Y330 459 aaPredicted RBP7.58□□□□□ -1.2
SMG6-217ENST00000575338 COL4A5P29400 1685 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 PHIPQ8WWQ0 1821 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 FZD9O00144 591 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 PES1O00541 588 aaKnown RBP7.57□□□□□ -1.2
SMG6-217ENST00000575338 MFAP3LO75121 409 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 ICAM1P05362 532 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 IDEP14735 1019 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 CASP1P29466 404 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 PBX1P40424 430 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 MTIF2P46199 727 aaKnown RBP7.57□□□□□ -1.2
SMG6-217ENST00000575338 TUBB4BP68371 445 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 PPP2R3AQ06190 1150 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 TUBB2AQ13885 445 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 MCM6Q14566 821 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 RASA3Q14644 834 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 PRR16Q569H4 304 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 FIGNQ5HY92 759 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 FAM83BQ5T0W9 1011 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 E4F1Q66K89 784 aaPredicted RBP7.57□□□□□ -1.2
SMG6-217ENST00000575338 TTI2Q6NXR4 508 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 CYP26C1Q6V0L0 522 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 NIPA1Q7RTP0 329 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 APTXQ7Z2E3 356 aaKnown RBP7.57□□□□□ -1.2
SMG6-217ENST00000575338 TC2NQ8N9U0 490 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 DDX12PQ92771 950 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 HAS1Q92839 578 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 KIFC2Q96AC6 838 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 PPP1R13BQ96KQ4 1090 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 CEP63Q96MT8 703 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 PNMA5Q96PV4 448 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 PLIN2Q99541 437 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 TUBGCP2Q9BSJ2 902 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 TUBB2BQ9BVA1 445 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 TMEM39BQ9GZU3 492 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 NUCKS1Q9H1E3 243 aaKnown RBP7.57□□□□□ -1.2
SMG6-217ENST00000575338 BLOC1S4Q9NUP1 217 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 PANK4Q9NVE7 773 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 GDAQ9Y2T3 454 aa7.57□□□□□ -1.2
SMG6-217ENST00000575338 UBE4BO95155 1302 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 A0A1W2PRG0 241 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 MYMKA6NI61 221 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 C19orf81C9J6K1 198 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 ZBED4O75132 1171 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms