RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	RNF186	Q9NXI6	227 aa		13.5	□□□□□ -0.25
PRPF8-212	ENST00000575116	SLC5A4	Q9NY91	659 aa		13.5	□□□□□ -0.25
PRPF8-212	ENST00000575116	PCDHA7	Q9UN72	937 aa		13.5	□□□□□ -0.25
PRPF8-212	ENST00000575116	DIS3	Q9Y2L1	958 aa	Known RBP	13.5	□□□□□ -0.25
PRPF8-212	ENST00000575116	UBIAD1	Q9Y5Z9	338 aa		13.5	□□□□□ -0.25
PRPF8-212	ENST00000575116	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.5	□□□□□ -0.25
PRPF8-212	ENST00000575116	GOLGA6L4	A6NEF3	574 aa		13.49	□□□□□ -0.25
PRPF8-212	ENST00000575116	SOWAHB	A6NEL2	793 aa		13.49	□□□□□ -0.25
PRPF8-212	ENST00000575116	ASB14	A6NK59	587 aa		13.49	□□□□□ -0.25
PRPF8-212	ENST00000575116	FAM86B1	E9PN63	330 aa		13.49	□□□□□ -0.25
PRPF8-212	ENST00000575116	MEIS1	O00470	390 aa		13.49	□□□□□ -0.25
PRPF8-212	ENST00000575116	TDP2	O95551	362 aa		13.49	□□□□□ -0.25
PRPF8-212	ENST00000575116	FAM86B2	P0C5J1	330 aa		13.49	□□□□□ -0.25
PRPF8-212	ENST00000575116	OR52Z1	P0C646	297 aa		13.49	□□□□□ -0.25
PRPF8-212	ENST00000575116	EIF2AK2	P19525	551 aa	Known RBP	13.49	□□□□□ -0.25
PRPF8-212	ENST00000575116	MARCKS	P29966	332 aa	Predicted RBP	13.49	□□□□□ -0.25
PRPF8-212	ENST00000575116	ME1	P48163	572 aa		13.49	□□□□□ -0.25
PRPF8-212	ENST00000575116	ALDH5A1	P51649	535 aa	Predicted RBP	13.49	□□□□□ -0.25
PRPF8-212	ENST00000575116	UBE2H	P62256	183 aa		13.49	□□□□□ -0.25
PRPF8-212	ENST00000575116	HTRA3	P83110	453 aa		13.49	□□□□□ -0.25
PRPF8-212	ENST00000575116	SET	Q01105	290 aa	Predicted RBP	13.49	□□□□□ -0.25
PRPF8-212	ENST00000575116	STXBP2	Q15833	593 aa		13.49	□□□□□ -0.25
PRPF8-212	ENST00000575116	CALCRL	Q16602	461 aa		13.49	□□□□□ -0.25
PRPF8-212	ENST00000575116	ZNF792	Q3KQV3	632 aa		13.49	□□□□□ -0.25
PRPF8-212	ENST00000575116	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.49	□□□□□ -0.25
PRPF8-212	ENST00000575116	SLFN12	Q8IYM2	578 aa		13.49	□□□□□ -0.25
PRPF8-212	ENST00000575116	ZNF579	Q8NAF0	562 aa	Known RBP	13.49	□□□□□ -0.25
PRPF8-212	ENST00000575116	FAM20A	Q96MK3	541 aa		13.49	□□□□□ -0.25
PRPF8-212	ENST00000575116	SAGE1	Q9NXZ1	904 aa		13.49	□□□□□ -0.25
PRPF8-212	ENST00000575116	IGLV3-22	A0A075B6J6	115 aa		13.48	□□□□□ -0.25
PRPF8-212	ENST00000575116		A0A1W2PQ27	194 aa		13.48	□□□□□ -0.25
PRPF8-212	ENST00000575116		A0A1W2PQ64	194 aa		13.48	□□□□□ -0.25
PRPF8-212	ENST00000575116		A0A1W2PQD8	194 aa		13.48	□□□□□ -0.25
PRPF8-212	ENST00000575116	SLC37A4	O43826	429 aa		13.48	□□□□□ -0.25
PRPF8-212	ENST00000575116	EDNRB	P24530	442 aa		13.48	□□□□□ -0.25
PRPF8-212	ENST00000575116	ADORA2A	P29274	412 aa		13.48	□□□□□ -0.25
PRPF8-212	ENST00000575116	UBXN2A	P68543	259 aa		13.48	□□□□□ -0.25
PRPF8-212	ENST00000575116	MRPS9	P82933	396 aa	Known RBP	13.48	□□□□□ -0.25
PRPF8-212	ENST00000575116	PRR16	Q569H4	304 aa		13.48	□□□□□ -0.25
PRPF8-212	ENST00000575116	MORN1	Q5T089	497 aa		13.48	□□□□□ -0.25
PRPF8-212	ENST00000575116	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.48	□□□□□ -0.25
PRPF8-212	ENST00000575116	DTHD1	Q6ZMT9	781 aa		13.48	□□□□□ -0.25
PRPF8-212	ENST00000575116	PLA2G4D	Q86XP0	818 aa		13.48	□□□□□ -0.25
PRPF8-212	ENST00000575116	POTED	Q86YR6	584 aa		13.48	□□□□□ -0.25
PRPF8-212	ENST00000575116	MORC4	Q8TE76	937 aa		13.48	□□□□□ -0.25
PRPF8-212	ENST00000575116	LENG9	Q96B70	501 aa		13.48	□□□□□ -0.25
PRPF8-212	ENST00000575116	GPRASP2	Q96D09	838 aa		13.48	□□□□□ -0.25
PRPF8-212	ENST00000575116	PURB	Q96QR8	312 aa	Known RBP	13.48	□□□□□ -0.25
PRPF8-212	ENST00000575116	TMEM60	Q9H2L4	133 aa		13.48	□□□□□ -0.25
PRPF8-212	ENST00000575116	KCNMB3	Q9NPA1	279 aa		13.48	□□□□□ -0.25
PRPF8-212	ENST00000575116	JADE2	Q9NQC1	790 aa		13.48	□□□□□ -0.25
PRPF8-212	ENST00000575116	FBXO2	Q9UK22	296 aa	Predicted RBP	13.48	□□□□□ -0.25
PRPF8-212	ENST00000575116	PLXNB2	O15031	1838 aa		13.48	□□□□□ -0.25
PRPF8-212	ENST00000575116	ZNF236	Q9UL36	1845 aa		13.48	□□□□□ -0.25
PRPF8-212	ENST00000575116	LCT	P09848	1927 aa		13.47	□□□□□ -0.25
PRPF8-212	ENST00000575116	COBL	O75128	1261 aa		13.47	□□□□□ -0.25
PRPF8-212	ENST00000575116	TRPA1	O75762	1119 aa		13.47	□□□□□ -0.25
PRPF8-212	ENST00000575116	EIF3J	O75822	258 aa	Known RBP	13.47	□□□□□ -0.25
PRPF8-212	ENST00000575116	PGK2	P07205	417 aa		13.47	□□□□□ -0.25
PRPF8-212	ENST00000575116	MYCL	P12524	364 aa	Predicted RBP	13.47	□□□□□ -0.25
PRPF8-212	ENST00000575116	LONP1	P36776	959 aa	Known RBP	13.47	□□□□□ -0.25
PRPF8-212	ENST00000575116	SP3	Q02447	781 aa		13.47	□□□□□ -0.25
PRPF8-212	ENST00000575116	PDIA5	Q14554	519 aa		13.47	□□□□□ -0.25
PRPF8-212	ENST00000575116	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.47	□□□□□ -0.25
PRPF8-212	ENST00000575116	DPP9	Q86TI2	863 aa		13.47	□□□□□ -0.25
PRPF8-212	ENST00000575116	NLRX1	Q86UT6	975 aa		13.47	□□□□□ -0.25
PRPF8-212	ENST00000575116	MSL3	Q8N5Y2	521 aa	Known RBP	13.47	□□□□□ -0.25
PRPF8-212	ENST00000575116	IL31RA	Q8NI17	732 aa		13.47	□□□□□ -0.25
PRPF8-212	ENST00000575116	ETNPPL	Q8TBG4	499 aa		13.47	□□□□□ -0.25
PRPF8-212	ENST00000575116	HAS1	Q92839	578 aa		13.47	□□□□□ -0.25
PRPF8-212	ENST00000575116	CDHR1	Q96JP9	859 aa		13.47	□□□□□ -0.25
PRPF8-212	ENST00000575116	INPP4A	Q96PE3	977 aa	Predicted RBP	13.47	□□□□□ -0.25
PRPF8-212	ENST00000575116	ASTN1	O14525	1302 aa		13.46	□□□□□ -0.25
PRPF8-212	ENST00000575116	MARCH6	O60337	910 aa		13.46	□□□□□ -0.25
PRPF8-212	ENST00000575116	TBC1D8	O95759	1140 aa		13.46	□□□□□ -0.25
PRPF8-212	ENST00000575116	HOXC6	P09630	235 aa		13.46	□□□□□ -0.25
PRPF8-212	ENST00000575116	ITGB5	P18084	799 aa		13.46	□□□□□ -0.25
PRPF8-212	ENST00000575116	CMA1	P23946	247 aa		13.46	□□□□□ -0.25
PRPF8-212	ENST00000575116	FXR2	P51116	673 aa	Known RBP eCLIP	13.46	□□□□□ -0.25	4e-15	■■□□□ 13.7
PRPF8-212	ENST00000575116	FCGRT	P55899	365 aa		13.46	□□□□□ -0.25
PRPF8-212	ENST00000575116	LACTB	P83111	547 aa	Predicted RBP	13.46	□□□□□ -0.25
PRPF8-212	ENST00000575116	MAP2K1	Q02750	393 aa	Predicted RBP	13.46	□□□□□ -0.25
PRPF8-212	ENST00000575116	PDE4D	Q08499	809 aa		13.46	□□□□□ -0.25
PRPF8-212	ENST00000575116	MAP2K5	Q13163	448 aa		13.46	□□□□□ -0.25
PRPF8-212	ENST00000575116	KIF22	Q14807	665 aa		13.46	□□□□□ -0.25
PRPF8-212	ENST00000575116	TMEM266	Q2M3C6	531 aa		13.46	□□□□□ -0.25
PRPF8-212	ENST00000575116	GNPTAB	Q3T906	1256 aa		13.46	□□□□□ -0.25
PRPF8-212	ENST00000575116	MAMDC4	Q6UXC1	1216 aa		13.46	□□□□□ -0.25
PRPF8-212	ENST00000575116	CYP2W1	Q8TAV3	490 aa		13.46	□□□□□ -0.25
PRPF8-212	ENST00000575116	SOCS4	Q8WXH5	440 aa		13.46	□□□□□ -0.25
PRPF8-212	ENST00000575116	USP6NL	Q92738	828 aa		13.46	□□□□□ -0.25
PRPF8-212	ENST00000575116	FGD4	Q96M96	766 aa		13.46	□□□□□ -0.25
PRPF8-212	ENST00000575116	AK8	Q96MA6	479 aa		13.46	□□□□□ -0.25
PRPF8-212	ENST00000575116	RIT2	Q99578	217 aa		13.46	□□□□□ -0.25
PRPF8-212	ENST00000575116	NUDT12	Q9BQG2	462 aa		13.46	□□□□□ -0.25
PRPF8-212	ENST00000575116	RAB34	Q9BZG1	259 aa		13.46	□□□□□ -0.25
PRPF8-212	ENST00000575116	PCDHA12	Q9UN75	941 aa		13.46	□□□□□ -0.25
PRPF8-212	ENST00000575116	TNPO2	O14787	897 aa	Known RBP	13.45	□□□□□ -0.26
PRPF8-212	ENST00000575116	MSH4	O15457	936 aa		13.45	□□□□□ -0.26
PRPF8-212	ENST00000575116	GADD45B	O75293	160 aa	Predicted RBP	13.45	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms