RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 ECM1Q16610 540 aa9.95□□□□□ -0.82
NCBP3-204ENST00000574911 LRRC55Q6ZSA7 311 aa9.95□□□□□ -0.82
NCBP3-204ENST00000574911 DDX12PQ92771 950 aa9.95□□□□□ -0.82
NCBP3-204ENST00000574911 EXOC4Q96A65 974 aa9.95□□□□□ -0.82
NCBP3-204ENST00000574911 TARSL2A2RTX5 802 aaKnown RBP9.94□□□□□ -0.82
NCBP3-204ENST00000574911 EPHB6O15197 1021 aa9.94□□□□□ -0.82
NCBP3-204ENST00000574911 PLEKP08567 350 aaPredicted RBP9.94□□□□□ -0.82
NCBP3-204ENST00000574911 TNNI2P48788 182 aa9.94□□□□□ -0.82
NCBP3-204ENST00000574911 CYP27A1Q02318 531 aa9.94□□□□□ -0.82
NCBP3-204ENST00000574911 DDR1Q08345 913 aa9.94□□□□□ -0.82
NCBP3-204ENST00000574911 KIF5AQ12840 1032 aa9.94□□□□□ -0.82
NCBP3-204ENST00000574911 UBE2SQ16763 222 aa9.94□□□□□ -0.82
NCBP3-204ENST00000574911 TTBK2Q6IQ55 1244 aa9.94□□□□□ -0.82
NCBP3-204ENST00000574911 TMC4Q7Z404 712 aa9.94□□□□□ -0.82
NCBP3-204ENST00000574911 CLEC10AQ8IUN9 316 aa9.94□□□□□ -0.82
NCBP3-204ENST00000574911 SP8Q8IXZ3 490 aa9.94□□□□□ -0.82
NCBP3-204ENST00000574911 TXLNBQ8N3L3 684 aa9.94□□□□□ -0.82
NCBP3-204ENST00000574911 HAS1Q92839 578 aa9.94□□□□□ -0.82
NCBP3-204ENST00000574911 MTMR8Q96EF0 704 aa9.94□□□□□ -0.82
NCBP3-204ENST00000574911 CCDC42Q96M95 316 aa9.94□□□□□ -0.82
NCBP3-204ENST00000574911 COA1Q9GZY4 146 aa9.94□□□□□ -0.82
NCBP3-204ENST00000574911 ARHGAP20Q9P2F6 1191 aa9.94□□□□□ -0.82
NCBP3-204ENST00000574911 DUSP10Q9Y6W6 482 aa9.94□□□□□ -0.82
NCBP3-204ENST00000574911 SHMT1P34896 483 aa9.94□□□□□ -0.82
NCBP3-204ENST00000574911 SEPT2Q15019 361 aa9.94□□□□□ -0.82
NCBP3-204ENST00000574911 SPA17Q15506 151 aa9.94□□□□□ -0.82
NCBP3-204ENST00000574911 HYIQ5T013 277 aa9.94□□□□□ -0.82
NCBP3-204ENST00000574911 CERS5Q8N5B7 392 aa9.94□□□□□ -0.82
NCBP3-204ENST00000574911 SECISBP2LQ93073 1101 aaKnown RBP9.94□□□□□ -0.82
NCBP3-204ENST00000574911 DNAJC19Q96DA6 116 aa9.94□□□□□ -0.82
NCBP3-204ENST00000574911 DDX25Q9UHL0 483 aaKnown RBP9.94□□□□□ -0.82
NCBP3-204ENST00000574911 ADAM21Q9UKJ8 722 aa9.94□□□□□ -0.82
NCBP3-204ENST00000574911 ATF5Q9Y2D1 282 aaPredicted RBP9.94□□□□□ -0.82
NCBP3-204ENST00000574911 PCDHA13Q9Y5I0 950 aa9.94□□□□□ -0.82
NCBP3-204ENST00000574911 MCM3P25205 808 aa9.93□□□□□ -0.82
NCBP3-204ENST00000574911 GYS2P54840 703 aa9.93□□□□□ -0.82
NCBP3-204ENST00000574911 KRT26Q7Z3Y9 468 aa9.93□□□□□ -0.82
NCBP3-204ENST00000574911 CCDC84Q86UT8 332 aaPredicted RBP9.93□□□□□ -0.82
NCBP3-204ENST00000574911 C2CD5Q86YS7 1000 aa9.93□□□□□ -0.82
NCBP3-204ENST00000574911 PROM2Q8N271 834 aa9.93□□□□□ -0.82
NCBP3-204ENST00000574911 GLIS3Q8NEA6 775 aa9.93□□□□□ -0.82
NCBP3-204ENST00000574911 BAP1Q92560 729 aa9.93□□□□□ -0.82
NCBP3-204ENST00000574911 CUL5Q93034 780 aa9.93□□□□□ -0.82
NCBP3-204ENST00000574911 EDEM3Q9BZQ6 932 aa9.93□□□□□ -0.82
NCBP3-204ENST00000574911 CALCOCO1Q9P1Z2 691 aa9.93□□□□□ -0.82
NCBP3-204ENST00000574911 SERPINB13Q9UIV8 391 aa9.93□□□□□ -0.82
NCBP3-204ENST00000574911 LRRIQ3A6PVS8 624 aaPredicted RBP9.93□□□□□ -0.82
NCBP3-204ENST00000574911 PDE2AO00408 941 aaPredicted RBP9.93□□□□□ -0.82
NCBP3-204ENST00000574911 POLRMTO00411 1230 aaKnown RBP9.93□□□□□ -0.82
NCBP3-204ENST00000574911 PPEF1O14829 653 aaPredicted RBP9.93□□□□□ -0.82
NCBP3-204ENST00000574911 IDEP14735 1019 aa9.93□□□□□ -0.82
NCBP3-204ENST00000574911 MRPL12P52815 198 aaKnown RBP9.93□□□□□ -0.82
NCBP3-204ENST00000574911 LRRC41Q15345 812 aa9.93□□□□□ -0.82
NCBP3-204ENST00000574911 ZCWPW2Q504Y3 356 aa9.93□□□□□ -0.82
NCBP3-204ENST00000574911 GPATCH4Q5T3I0 446 aaKnown RBP9.93□□□□□ -0.82
NCBP3-204ENST00000574911 NEK11Q8NG66 645 aa9.93□□□□□ -0.82
NCBP3-204ENST00000574911 CAPZA3Q96KX2 299 aa9.93□□□□□ -0.82
NCBP3-204ENST00000574911 TSG101Q99816 390 aa9.93□□□□□ -0.82
NCBP3-204ENST00000574911 SH2D4AQ9H788 454 aa9.93□□□□□ -0.82
NCBP3-204ENST00000574911 VIPAS39Q9H9C1 493 aa9.93□□□□□ -0.82
NCBP3-204ENST00000574911 FAM207AQ9NSI2 230 aaPredicted RBP9.93□□□□□ -0.82
NCBP3-204ENST00000574911 USP40Q9NVE5 1235 aa9.93□□□□□ -0.82
NCBP3-204ENST00000574911 GREB1LQ9C091 1923 aaPredicted RBP9.93□□□□□ -0.82
NCBP3-204ENST00000574911 MACROD2A1Z1Q3 448 aa9.92□□□□□ -0.82
NCBP3-204ENST00000574911 USP17L10C9JJH3 530 aa9.92□□□□□ -0.82
NCBP3-204ENST00000574911 RIMBP2O15034 1052 aa9.92□□□□□ -0.82
NCBP3-204ENST00000574911 ZBTB5O15062 677 aa9.92□□□□□ -0.82
NCBP3-204ENST00000574911 USO1O60763 962 aaKnown RBP9.92□□□□□ -0.82
NCBP3-204ENST00000574911 N4BP1O75113 896 aaKnown RBP9.92□□□□□ -0.82
NCBP3-204ENST00000574911 GCFC2P16383 781 aaKnown RBP9.92□□□□□ -0.82
NCBP3-204ENST00000574911 EIF4A3P38919 411 aaKnown RBP9.92□□□□□ -0.82
NCBP3-204ENST00000574911 KIF11P52732 1056 aa9.92□□□□□ -0.82
NCBP3-204ENST00000574911 COASYQ13057 564 aa9.92□□□□□ -0.82
NCBP3-204ENST00000574911 ZNF572Q7Z3I7 529 aaPredicted RBP9.92□□□□□ -0.82
NCBP3-204ENST00000574911 MYOCDQ8IZQ8 938 aa9.92□□□□□ -0.82
NCBP3-204ENST00000574911 GJD4Q96KN9 370 aaPredicted RBP9.92□□□□□ -0.82
NCBP3-204ENST00000574911 MMRN2Q9H8L6 949 aa9.92□□□□□ -0.82
NCBP3-204ENST00000574911 ATP6V0A2Q9Y487 856 aa9.92□□□□□ -0.82
NCBP3-204ENST00000574911 JRKLQ9Y4A0 524 aa9.92□□□□□ -0.82
NCBP3-204ENST00000574911 LRRC53A6NM62 1247 aa9.92□□□□□ -0.82
NCBP3-204ENST00000574911 F8W031 263 aaPredicted RBP9.92□□□□□ -0.82
NCBP3-204ENST00000574911 ZNF185O15231 689 aa9.92□□□□□ -0.82
NCBP3-204ENST00000574911 PJA2O43164 708 aa9.92□□□□□ -0.82
NCBP3-204ENST00000574911 ONECUT3O60422 494 aaPredicted RBP9.92□□□□□ -0.82
NCBP3-204ENST00000574911 TACC1O75410 805 aa9.92□□□□□ -0.82
NCBP3-204ENST00000574911 PRLRP16471 622 aa9.92□□□□□ -0.82
NCBP3-204ENST00000574911 HNRNPH2P55795 449 aaKnown RBP9.92□□□□□ -0.82
NCBP3-204ENST00000574911 KCNMA1Q12791 1236 aa9.92□□□□□ -0.82
NCBP3-204ENST00000574911 CCDC96Q2M329 555 aa9.92□□□□□ -0.82
NCBP3-204ENST00000574911 ASTE1Q2TB18 679 aaPredicted RBP9.92□□□□□ -0.82
NCBP3-204ENST00000574911 PDXDC1Q6P996 788 aa9.92□□□□□ -0.82
NCBP3-204ENST00000574911 ARHGAP27Q6ZUM4 889 aa9.92□□□□□ -0.82
NCBP3-204ENST00000574911 TRIM58Q8NG06 486 aa9.92□□□□□ -0.82
NCBP3-204ENST00000574911 NAP1L4Q99733 375 aaKnown RBP9.92□□□□□ -0.82
NCBP3-204ENST00000574911 IFIH1Q9BYX4 1025 aaKnown RBP9.92□□□□□ -0.82
NCBP3-204ENST00000574911 SNX12Q9UMY4 172 aa9.92□□□□□ -0.82
NCBP3-204ENST00000574911 SLC26A4O43511 780 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 SLC16A2P36021 539 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 MAPK8IP2Q13387 824 aaPredicted RBP9.91□□□□□ -0.82
NCBP3-204ENST00000574911 RRAGAQ7L523 313 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms