RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 TMEM39AQ9NV64 488 aa11.6□□□□□ -0.55
RPA1-206ENST00000573994 PCDHA1Q9Y5I3 950 aa11.6□□□□□ -0.55
RPA1-206ENST00000573994 ELP1O95163 1332 aa11.6□□□□□ -0.55
RPA1-206ENST00000573994 ARVCFO00192 962 aa11.59□□□□□ -0.55
RPA1-206ENST00000573994 SH2B2O14492 632 aaPredicted RBP11.59□□□□□ -0.55
RPA1-206ENST00000573994 ZBTB5O15062 677 aa11.59□□□□□ -0.55
RPA1-206ENST00000573994 CYTH3O43739 400 aa11.59□□□□□ -0.55
RPA1-206ENST00000573994 CDC45O75419 566 aa11.59□□□□□ -0.55
RPA1-206ENST00000573994 ARIH2O95376 493 aa11.59□□□□□ -0.55
RPA1-206ENST00000573994 RAG1P15918 1043 aa11.59□□□□□ -0.55
RPA1-206ENST00000573994 RXRAP19793 462 aa11.59□□□□□ -0.55
RPA1-206ENST00000573994 HOXA13P31271 388 aaPredicted RBP11.59□□□□□ -0.55
RPA1-206ENST00000573994 NKX3-2P78367 333 aa11.59□□□□□ -0.55
RPA1-206ENST00000573994 FAAP100Q0VG06 881 aa11.59□□□□□ -0.55
RPA1-206ENST00000573994 C9orf50Q5SZB4 431 aa11.59□□□□□ -0.55
RPA1-206ENST00000573994 MCF2L2Q86YR7 1114 aa11.59□□□□□ -0.55
RPA1-206ENST00000573994 RGS22Q8NE09 1264 aa11.59□□□□□ -0.55
RPA1-206ENST00000573994 MTMR8Q96EF0 704 aa11.59□□□□□ -0.55
RPA1-206ENST00000573994 RMDN3Q96TC7 470 aa11.59□□□□□ -0.55
RPA1-206ENST00000573994 TBX21Q9UL17 535 aa11.59□□□□□ -0.55
RPA1-206ENST00000573994 RBM47A0AV96 593 aaKnown RBP11.58□□□□□ -0.56
RPA1-206ENST00000573994 B4DLN1 442 aa11.58□□□□□ -0.56
RPA1-206ENST00000573994 ARHGAP33O14559 1287 aa11.58□□□□□ -0.56
RPA1-206ENST00000573994 KIAA0355O15063 1070 aa11.58□□□□□ -0.56
RPA1-206ENST00000573994 ZEB2O60315 1214 aa11.58□□□□□ -0.56
RPA1-206ENST00000573994 DDAH1O94760 285 aa11.58□□□□□ -0.56
RPA1-206ENST00000573994 MYL3P08590 195 aa11.58□□□□□ -0.56
RPA1-206ENST00000573994 MCM5P33992 734 aa11.58□□□□□ -0.56
RPA1-206ENST00000573994 MRPL12P52815 198 aaKnown RBP11.58□□□□□ -0.56
RPA1-206ENST00000573994 EPHB4P54760 987 aa11.58□□□□□ -0.56
RPA1-206ENST00000573994 NECTIN1Q15223 517 aa11.58□□□□□ -0.56
RPA1-206ENST00000573994 LRIT3Q3SXY7 679 aa11.58□□□□□ -0.56
RPA1-206ENST00000573994 ARHGEF16Q5VV41 709 aa11.58□□□□□ -0.56
RPA1-206ENST00000573994 SEPT14Q6ZU15 432 aa11.58□□□□□ -0.56
RPA1-206ENST00000573994 Q7L0L9 218 aa11.58□□□□□ -0.56
RPA1-206ENST00000573994 FAM126BQ8IXS8 530 aa11.58□□□□□ -0.56
RPA1-206ENST00000573994 CTCFLQ8NI51 663 aaPredicted RBP11.58□□□□□ -0.56
RPA1-206ENST00000573994 NSUN6Q8TEA1 469 aaKnown RBP11.58□□□□□ -0.56
RPA1-206ENST00000573994 SCFD2Q8WU76 684 aa11.58□□□□□ -0.56
RPA1-206ENST00000573994 PPP1R13LQ8WUF5 828 aa11.58□□□□□ -0.56
RPA1-206ENST00000573994 TOX2Q96NM4 488 aa11.58□□□□□ -0.56
RPA1-206ENST00000573994 PPP1R12CQ9BZL4 782 aa11.58□□□□□ -0.56
RPA1-206ENST00000573994 Q9Y3F1 56 aa11.58□□□□□ -0.56
RPA1-206ENST00000573994 MROH7Q68CQ1 1323 aa11.58□□□□□ -0.56
RPA1-206ENST00000573994 CCDC69A6NI79 296 aa11.57□□□□□ -0.56
RPA1-206ENST00000573994 CABYRO75952 493 aa11.57□□□□□ -0.56
RPA1-206ENST00000573994 PLEKHA8P1O95397 391 aa11.57□□□□□ -0.56
RPA1-206ENST00000573994 NEFLP07196 543 aa11.57□□□□□ -0.56
RPA1-206ENST00000573994 TXNP10599 105 aaKnown RBP11.57□□□□□ -0.56
RPA1-206ENST00000573994 CDK7P50613 346 aa11.57□□□□□ -0.56
RPA1-206ENST00000573994 HSD17B4P51659 736 aa11.57□□□□□ -0.56
RPA1-206ENST00000573994 TRAF1Q13077 416 aa11.57□□□□□ -0.56
RPA1-206ENST00000573994 ITGA7Q13683 1181 aa11.57□□□□□ -0.56
RPA1-206ENST00000573994 TTLL4Q14679 1199 aa11.57□□□□□ -0.56
RPA1-206ENST00000573994 SHHQ15465 462 aa11.57□□□□□ -0.56
RPA1-206ENST00000573994 CMTR1Q8N1G2 835 aaKnown RBP11.57□□□□□ -0.56
RPA1-206ENST00000573994 IL31RAQ8NI17 732 aa11.57□□□□□ -0.56
RPA1-206ENST00000573994 DDX27Q96GQ7 796 aaKnown RBP11.57□□□□□ -0.56
RPA1-206ENST00000573994 TCEANC2Q96MN5 208 aa11.57□□□□□ -0.56
RPA1-206ENST00000573994 MTA3Q9BTC8 594 aa11.57□□□□□ -0.56
RPA1-206ENST00000573994 TRPV6Q9H1D0 765 aa11.57□□□□□ -0.56
RPA1-206ENST00000573994 RIOX1Q9H6W3 641 aa11.57□□□□□ -0.56
RPA1-206ENST00000573994 PXMP2Q9NR77 195 aa11.57□□□□□ -0.56
RPA1-206ENST00000573994 GRIN2DO15399 1336 aa11.57□□□□□ -0.56
RPA1-206ENST00000573994 PNMA6FA0A0J9YX94 578 aa11.56□□□□□ -0.56
RPA1-206ENST00000573994 TLR3O15455 904 aaKnown RBP11.56□□□□□ -0.56
RPA1-206ENST00000573994 SORBS3O60504 671 aa11.56□□□□□ -0.56
RPA1-206ENST00000573994 CPT1AP50416 773 aa11.56□□□□□ -0.56
RPA1-206ENST00000573994 FPGSQ05932 587 aa11.56□□□□□ -0.56
RPA1-206ENST00000573994 STXBP2Q15833 593 aa11.56□□□□□ -0.56
RPA1-206ENST00000573994 LY6KQ17RY6 165 aa11.56□□□□□ -0.56
RPA1-206ENST00000573994 RNF20Q5VTR2 975 aa11.56□□□□□ -0.56
RPA1-206ENST00000573994 FCHSD1Q86WN1 690 aa11.56□□□□□ -0.56
RPA1-206ENST00000573994 MICU3Q86XE3 530 aa11.56□□□□□ -0.56
RPA1-206ENST00000573994 OXER1Q8TDS5 423 aa11.56□□□□□ -0.56
RPA1-206ENST00000573994 TMEM87BQ96K49 555 aa11.56□□□□□ -0.56
RPA1-206ENST00000573994 SEZ6LQ9BYH1 1024 aa11.56□□□□□ -0.56
RPA1-206ENST00000573994 hCG_1642624A0A1W2PR95 340 aa11.55□□□□□ -0.56
RPA1-206ENST00000573994 GCOM1H8Y6P7 765 aaPredicted RBP11.55□□□□□ -0.56
RPA1-206ENST00000573994 NKRFO15226 690 aaKnown RBP eCLIP11.55□□□□□ -0.56
RPA1-206ENST00000573994 B4GALT4O60513 344 aa11.55□□□□□ -0.56
RPA1-206ENST00000573994 TIMP1P01033 207 aa11.55□□□□□ -0.56
RPA1-206ENST00000573994 NR3C2P08235 984 aa11.55□□□□□ -0.56
RPA1-206ENST00000573994 POLR2MP0CAP2 368 aa11.55□□□□□ -0.56
RPA1-206ENST00000573994 MYCLP12524 364 aaPredicted RBP11.55□□□□□ -0.56
RPA1-206ENST00000573994 KIF5BP33176 963 aa11.55□□□□□ -0.56
RPA1-206ENST00000573994 CYP2C18P33260 490 aa11.55□□□□□ -0.56
RPA1-206ENST00000573994 CHMP4BP1P59074 171 aa11.55□□□□□ -0.56
RPA1-206ENST00000573994 PURAQ00577 322 aaKnown RBP11.55□□□□□ -0.56
RPA1-206ENST00000573994 CCDC62Q6P9F0 684 aa11.55□□□□□ -0.56
RPA1-206ENST00000573994 TMTC2Q8N394 836 aa11.55□□□□□ -0.56
RPA1-206ENST00000573994 DEFB123Q8N688 67 aa11.55□□□□□ -0.56
RPA1-206ENST00000573994 SAMD3Q8N6K7 520 aa11.55□□□□□ -0.56
RPA1-206ENST00000573994 SLC43A3Q8NBI5 491 aa11.55□□□□□ -0.56
RPA1-206ENST00000573994 AFG1LQ8WV93 481 aa11.55□□□□□ -0.56
RPA1-206ENST00000573994 RRP36Q96EU6 259 aaKnown RBP11.55□□□□□ -0.56
RPA1-206ENST00000573994 RNPC3Q96LT9 517 aaKnown RBP11.55□□□□□ -0.56
RPA1-206ENST00000573994 IWS1Q96ST2 819 aa11.55□□□□□ -0.56
RPA1-206ENST00000573994 PDCD2LQ9BRP1 358 aa11.55□□□□□ -0.56
RPA1-206ENST00000573994 LARP6Q9BRS8 491 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms