RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 NKRFO15226 690 aaKnown RBP eCLIP31.95■■■□□ 2.71
SCARF1-207ENST00000573867 ANAPC15P60006 121 aa31.95■■■□□ 2.71
SCARF1-207ENST00000573867 CCT2P78371 535 aaKnown RBP31.95■■■□□ 2.71
SCARF1-207ENST00000573867 MRPS9P82933 396 aaKnown RBP31.95■■■□□ 2.71
SCARF1-207ENST00000573867 SMARCC2Q8TAQ2 1214 aa31.95■■■□□ 2.71
SCARF1-207ENST00000573867 IL17RAQ96F46 866 aa31.95■■■□□ 2.71
SCARF1-207ENST00000573867 PDRG1Q9NUG6 133 aa31.95■■■□□ 2.71
SCARF1-207ENST00000573867 CCDC196A0A1B0GTZ2 297 aa31.94■■■□□ 2.7
SCARF1-207ENST00000573867 PPFIA3O75145 1194 aa31.94■■■□□ 2.7
SCARF1-207ENST00000573867 CCND2P30279 289 aa31.94■■■□□ 2.7
SCARF1-207ENST00000573867 ARHGAP1Q07960 439 aa31.94■■■□□ 2.7
SCARF1-207ENST00000573867 SH3RF1Q7Z6J0 888 aa31.94■■■□□ 2.7
SCARF1-207ENST00000573867 CUL5Q93034 780 aa31.94■■■□□ 2.7
SCARF1-207ENST00000573867 PHKBQ93100 1093 aa31.94■■■□□ 2.7
SCARF1-207ENST00000573867 PDLIM7Q9NR12 457 aa31.94■■■□□ 2.7
SCARF1-207ENST00000573867 DDX41Q9UJV9 622 aaKnown RBP31.94■■■□□ 2.7
SCARF1-207ENST00000573867 CDK7P50613 346 aa31.93■■■□□ 2.7
SCARF1-207ENST00000573867 GDF15Q99988 308 aa31.93■■■□□ 2.7
SCARF1-207ENST00000573867 GRIN2DO15399 1336 aa31.93■■■□□ 2.7
SCARF1-207ENST00000573867 PQBP1O60828 265 aaKnown RBP31.92■■■□□ 2.7
SCARF1-207ENST00000573867 MAGEA10P43363 369 aaPredicted RBP31.92■■■□□ 2.7
SCARF1-207ENST00000573867 NAPAP54920 295 aa31.92■■■□□ 2.7
SCARF1-207ENST00000573867 PKN1Q16512 942 aa31.92■■■□□ 2.7
SCARF1-207ENST00000573867 BARHL2Q9NY43 387 aa31.92■■■□□ 2.7
SCARF1-207ENST00000573867 RBM27Q9P2N5 1060 aaKnown RBP31.92■■■□□ 2.7
SCARF1-207ENST00000573867 MRVI1Q9Y6F6 885 aa31.92■■■□□ 2.7
SCARF1-207ENST00000573867 PFKFB3Q16875 520 aaPredicted RBP31.91■■■□□ 2.7
SCARF1-207ENST00000573867 ANKRD33Q7Z3H0 272 aa31.91■■■□□ 2.7
SCARF1-207ENST00000573867 VTI1AQ96AJ9 217 aa31.91■■■□□ 2.7
SCARF1-207ENST00000573867 A0A0U1RQG5 324 aaPredicted RBP31.9■■■□□ 2.7
SCARF1-207ENST00000573867 TRIM43BA6NCK2 446 aa31.9■■■□□ 2.7
SCARF1-207ENST00000573867 A6NJR5 290 aa31.9■■■□□ 2.7
SCARF1-207ENST00000573867 ARVCFO00192 962 aa31.9■■■□□ 2.7
SCARF1-207ENST00000573867 ZEB2O60315 1214 aa31.9■■■□□ 2.7
SCARF1-207ENST00000573867 CPT1AP50416 773 aa31.9■■■□□ 2.7
SCARF1-207ENST00000573867 PSMC6P62333 389 aa31.9■■■□□ 2.7
SCARF1-207ENST00000573867 PURAQ00577 322 aaKnown RBP31.9■■■□□ 2.7
SCARF1-207ENST00000573867 SP2Q02086 613 aa31.9■■■□□ 2.7
SCARF1-207ENST00000573867 PPP1R18Q6NYC8 613 aa31.9■■■□□ 2.7
SCARF1-207ENST00000573867 SLC43A3Q8NBI5 491 aa31.9■■■□□ 2.7
SCARF1-207ENST00000573867 TRIM43Q96BQ3 446 aaPredicted RBP31.9■■■□□ 2.7
SCARF1-207ENST00000573867 ZNF274Q96GC6 653 aaPredicted RBP31.9■■■□□ 2.7
SCARF1-207ENST00000573867 LTBP2Q14767 1821 aa31.89■■■□□ 2.7
SCARF1-207ENST00000573867 PRPF3O43395 683 aaKnown RBP31.89■■■□□ 2.7
SCARF1-207ENST00000573867 GH1P01241 217 aa31.89■■■□□ 2.7
SCARF1-207ENST00000573867 SCG2P13521 617 aa31.89■■■□□ 2.7
SCARF1-207ENST00000573867 IFNAR1P17181 557 aa31.89■■■□□ 2.7
SCARF1-207ENST00000573867 AFG1LQ8WV93 481 aa31.89■■■□□ 2.7
SCARF1-207ENST00000573867 INPP4AQ96PE3 977 aaPredicted RBP31.89■■■□□ 2.7
SCARF1-207ENST00000573867 RIC8AQ9NPQ8 531 aa31.89■■■□□ 2.7
SCARF1-207ENST00000573867 PRDM5Q9NQX1 630 aaPredicted RBP31.89■■■□□ 2.7
SCARF1-207ENST00000573867 hCG_1984214I3L0E3 225 aa31.88■■■□□ 2.69
SCARF1-207ENST00000573867 ADAMTS3O15072 1205 aa31.88■■■□□ 2.69
SCARF1-207ENST00000573867 CABYRO75952 493 aa31.88■■■□□ 2.69
SCARF1-207ENST00000573867 MYL3P08590 195 aa31.88■■■□□ 2.69
SCARF1-207ENST00000573867 FAAP100Q0VG06 881 aa31.88■■■□□ 2.69
SCARF1-207ENST00000573867 SEMA3FQ13275 785 aa31.88■■■□□ 2.69
SCARF1-207ENST00000573867 HABP4Q5JVS0 413 aaKnown RBP31.88■■■□□ 2.69
SCARF1-207ENST00000573867 PCNX4Q63HM2 1172 aa31.88■■■□□ 2.69
SCARF1-207ENST00000573867 ZNF713Q8N859 430 aaPredicted RBP31.88■■■□□ 2.69
SCARF1-207ENST00000573867 RTEL1Q9NZ71 1219 aa31.88■■■□□ 2.69
SCARF1-207ENST00000573867 CLTBP09497 229 aa31.87■■■□□ 2.69
SCARF1-207ENST00000573867 ITGB8P26012 769 aa31.87■■■□□ 2.69
SCARF1-207ENST00000573867 MDM2Q00987 491 aaPredicted RBP31.87■■■□□ 2.69
SCARF1-207ENST00000573867 STK3Q13188 491 aa31.87■■■□□ 2.69
SCARF1-207ENST00000573867 TOX2Q96NM4 488 aa31.87■■■□□ 2.69
SCARF1-207ENST00000573867 ALDH8A1Q9H2A2 487 aaPredicted RBP31.87■■■□□ 2.69
SCARF1-207ENST00000573867 BCAS3Q9H6U6 928 aa31.87■■■□□ 2.69
SCARF1-207ENST00000573867 POLR3EQ9NVU0 708 aa31.87■■■□□ 2.69
SCARF1-207ENST00000573867 PCDHA6Q9UN73 950 aa31.87■■■□□ 2.69
SCARF1-207ENST00000573867 PCDHA8Q9Y5H6 950 aa31.87■■■□□ 2.69
SCARF1-207ENST00000573867 SMCO2A6NFE2 343 aa31.86■■■□□ 2.69
SCARF1-207ENST00000573867 SORBS3O60504 671 aa31.86■■■□□ 2.69
SCARF1-207ENST00000573867 MMP3P08254 477 aa31.86■■■□□ 2.69
SCARF1-207ENST00000573867 UBA1P22314 1058 aaKnown RBP31.86■■■□□ 2.69
SCARF1-207ENST00000573867 ITGA7Q13683 1181 aa31.86■■■□□ 2.69
SCARF1-207ENST00000573867 FAM126BQ8IXS8 530 aa31.86■■■□□ 2.69
SCARF1-207ENST00000573867 PGBD1Q96JS3 809 aa31.86■■■□□ 2.69
SCARF1-207ENST00000573867 SLC26A6Q9BXS9 759 aa31.86■■■□□ 2.69
SCARF1-207ENST00000573867 RNF26Q9BY78 433 aaPredicted RBP31.86■■■□□ 2.69
SCARF1-207ENST00000573867 TPCN1Q9ULQ1 816 aa31.86■■■□□ 2.69
SCARF1-207ENST00000573867 EIF5BO60841 1220 aaKnown RBP31.85■■■□□ 2.69
SCARF1-207ENST00000573867 ADCY7P51828 1080 aa31.85■■■□□ 2.69
SCARF1-207ENST00000573867 AK2P54819 239 aa31.85■■■□□ 2.69
SCARF1-207ENST00000573867 PPP1R13LQ8WUF5 828 aa31.85■■■□□ 2.69
SCARF1-207ENST00000573867 EMID1Q96A84 441 aaPredicted RBP31.85■■■□□ 2.69
SCARF1-207ENST00000573867 TMEM260Q9NX78 707 aa31.85■■■□□ 2.69
SCARF1-207ENST00000573867 ICAM3P32942 547 aa31.84■■■□□ 2.69
SCARF1-207ENST00000573867 CLK2P49760 499 aaKnown RBP31.84■■■□□ 2.69
SCARF1-207ENST00000573867 MTG1Q9BT17 334 aaPredicted RBP31.84■■■□□ 2.69
SCARF1-207ENST00000573867 SPDYE3A6NKU9 549 aa31.83■■■□□ 2.69
SCARF1-207ENST00000573867 SPATA31C2B4DYI2 1134 aa31.83■■■□□ 2.69
SCARF1-207ENST00000573867 STAM2O75886 525 aa31.83■■■□□ 2.69
SCARF1-207ENST00000573867 GGPS1O95749 300 aa31.83■■■□□ 2.69
SCARF1-207ENST00000573867 BMP8BP34820 402 aa31.83■■■□□ 2.69
SCARF1-207ENST00000573867 CELF3Q5SZQ8 465 aaKnown RBP31.83■■■□□ 2.69
SCARF1-207ENST00000573867 MYSM1Q5VVJ2 828 aa31.83■■■□□ 2.69
SCARF1-207ENST00000573867 XRRA1Q6P2D8 792 aa31.83■■■□□ 2.69
SCARF1-207ENST00000573867 KCNV1Q6PIU1 500 aa31.83■■■□□ 2.69
SCARF1-207ENST00000573867 DHX37Q8IY37 1157 aaKnown RBP31.83■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms