RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 MMP3P08254 477 aa14.35□□□□□ -0.11
PRPF8-208ENST00000573716 CKBP12277 381 aa14.35□□□□□ -0.11
PRPF8-208ENST00000573716 LY6KQ17RY6 165 aa14.35□□□□□ -0.11
PRPF8-208ENST00000573716 USH1GQ495M9 461 aa14.35□□□□□ -0.11
PRPF8-208ENST00000573716 RRP12Q5JTH9 1297 aaKnown RBP14.35□□□□□ -0.11
PRPF8-208ENST00000573716 CTAGE1Q96RT6 745 aa14.35□□□□□ -0.11
PRPF8-208ENST00000573716 HDAC6Q9UBN7 1215 aa14.35□□□□□ -0.11
PRPF8-208ENST00000573716 EFCAB14O75071 495 aa14.34□□□□□ -0.11
PRPF8-208ENST00000573716 PARNO95453 639 aaKnown RBP14.34□□□□□ -0.11
PRPF8-208ENST00000573716 CXCL10P02778 98 aa14.34□□□□□ -0.11
PRPF8-208ENST00000573716 CASTP20810 708 aaKnown RBP14.34□□□□□ -0.11
PRPF8-208ENST00000573716 EDNRBP24530 442 aa14.34□□□□□ -0.11
PRPF8-208ENST00000573716 BTNL9Q6UXG8 535 aa14.34□□□□□ -0.11
PRPF8-208ENST00000573716 MYOCDQ8IZQ8 938 aa14.34□□□□□ -0.11
PRPF8-208ENST00000573716 DNERQ8NFT8 737 aa14.34□□□□□ -0.11
PRPF8-208ENST00000573716 FBXL18Q96ME1 805 aa14.34□□□□□ -0.11
PRPF8-208ENST00000573716 INSL6Q9Y581 213 aa14.34□□□□□ -0.11
PRPF8-208ENST00000573716 ZNF286BP0CG31 522 aa14.33□□□□□ -0.12
PRPF8-208ENST00000573716 TOP1P11387 765 aaKnown RBP14.33□□□□□ -0.12
PRPF8-208ENST00000573716 PSEN2P49810 448 aa14.33□□□□□ -0.12
PRPF8-208ENST00000573716 ARHGAP1Q07960 439 aa14.33□□□□□ -0.12
PRPF8-208ENST00000573716 PTPROQ16827 1216 aa14.33□□□□□ -0.12
PRPF8-208ENST00000573716 PUS10Q3MIT2 529 aaKnown RBP14.33□□□□□ -0.12
PRPF8-208ENST00000573716 ZNF618Q5T7W0 954 aa14.33□□□□□ -0.12
PRPF8-208ENST00000573716 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.33□□□□□ -0.12
PRPF8-208ENST00000573716 KAT2BQ92831 832 aa14.33□□□□□ -0.12
PRPF8-208ENST00000573716 MRPL38Q96DV4 380 aaKnown RBP14.33□□□□□ -0.12
PRPF8-208ENST00000573716 TMEM47Q9BQJ4 181 aa14.33□□□□□ -0.12
PRPF8-208ENST00000573716 GTF2IRD1Q9UHL9 959 aa14.33□□□□□ -0.12
PRPF8-208ENST00000573716 CTNNA3Q9UI47 895 aa14.33□□□□□ -0.12
PRPF8-208ENST00000573716 MYH7BA7E2Y1 1941 aa14.33□□□□□ -0.12
PRPF8-208ENST00000573716 KIAA1217Q5T5P2 1943 aa14.33□□□□□ -0.12
PRPF8-208ENST00000573716 AMHP03971 560 aa14.32□□□□□ -0.12
PRPF8-208ENST00000573716 DGKDQ16760 1214 aa14.32□□□□□ -0.12
PRPF8-208ENST00000573716 TIGD5Q53EQ6 642 aa14.32□□□□□ -0.12
PRPF8-208ENST00000573716 ZMYM1Q5SVZ6 1142 aa14.32□□□□□ -0.12
PRPF8-208ENST00000573716 CCDC62Q6P9F0 684 aa14.32□□□□□ -0.12
PRPF8-208ENST00000573716 SESTD1Q86VW0 696 aa14.32□□□□□ -0.12
PRPF8-208ENST00000573716 DHX37Q8IY37 1157 aaKnown RBP14.32□□□□□ -0.12
PRPF8-208ENST00000573716 PNMA2Q9UL42 364 aa14.32□□□□□ -0.12
PRPF8-208ENST00000573716 FAM50BQ9Y247 325 aa14.32□□□□□ -0.12
PRPF8-208ENST00000573716 MICAL3Q7RTP6 2002 aa14.32□□□□□ -0.12
PRPF8-208ENST00000573716 SORBS3O60504 671 aa14.31□□□□□ -0.12
PRPF8-208ENST00000573716 LGR5O75473 907 aa14.31□□□□□ -0.12
PRPF8-208ENST00000573716 ZNF200P98182 395 aaPredicted RBP14.31□□□□□ -0.12
PRPF8-208ENST00000573716 PTK7Q13308 1070 aa14.31□□□□□ -0.12
PRPF8-208ENST00000573716 GPM6BQ13491 265 aa14.31□□□□□ -0.12
PRPF8-208ENST00000573716 MFSD10Q14728 455 aa14.31□□□□□ -0.12
PRPF8-208ENST00000573716 KIAA0753Q2KHM9 967 aa14.31□□□□□ -0.12
PRPF8-208ENST00000573716 EPC2Q52LR7 807 aa14.31□□□□□ -0.12
PRPF8-208ENST00000573716 TCEAL5Q5H9L2 206 aa14.31□□□□□ -0.12
PRPF8-208ENST00000573716 BANK1Q8NDB2 785 aa14.31□□□□□ -0.12
PRPF8-208ENST00000573716 NEK9Q8TD19 979 aa14.31□□□□□ -0.12
PRPF8-208ENST00000573716 ANKS1AQ92625 1134 aa14.31□□□□□ -0.12
PRPF8-208ENST00000573716 WNT8BQ93098 351 aa14.31□□□□□ -0.12
PRPF8-208ENST00000573716 CLDND1Q9NY35 253 aa14.31□□□□□ -0.12
PRPF8-208ENST00000573716 NLRC5Q86WI3 1866 aa14.31□□□□□ -0.12
PRPF8-208ENST00000573716 ORC4O43929 436 aa14.3□□□□□ -0.12
PRPF8-208ENST00000573716 UPP2O95045 317 aa14.3□□□□□ -0.12
PRPF8-208ENST00000573716 PDHBP11177 359 aa14.3□□□□□ -0.12
PRPF8-208ENST00000573716 THPOP40225 353 aa14.3□□□□□ -0.12
PRPF8-208ENST00000573716 RBL2Q08999 1139 aa14.3□□□□□ -0.12
PRPF8-208ENST00000573716 MBTPS1Q14703 1052 aa14.3□□□□□ -0.12
PRPF8-208ENST00000573716 CLUL1Q15846 466 aa14.3□□□□□ -0.12
PRPF8-208ENST00000573716 VPS53Q5VIR6 699 aa14.3□□□□□ -0.12
PRPF8-208ENST00000573716 DBF4BQ8NFT6 615 aa14.3□□□□□ -0.12
PRPF8-208ENST00000573716 TAAR1Q96RJ0 339 aa14.3□□□□□ -0.12
PRPF8-208ENST00000573716 YME1L1Q96TA2 773 aa14.3□□□□□ -0.12
PRPF8-208ENST00000573716 KATNAL1Q9BW62 490 aa14.3□□□□□ -0.12
PRPF8-208ENST00000573716 CPVLQ9H3G5 476 aa14.3□□□□□ -0.12
PRPF8-208ENST00000573716 WDR19Q8NEZ3 1342 aa14.3□□□□□ -0.12
PRPF8-208ENST00000573716 FOXP2O15409 715 aa14.29□□□□□ -0.12
PRPF8-208ENST00000573716 GOLGA8HP0CJ92 632 aa14.29□□□□□ -0.12
PRPF8-208ENST00000573716 ZP2Q05996 745 aa14.29□□□□□ -0.12
PRPF8-208ENST00000573716 ZNF543Q08ER8 600 aa14.29□□□□□ -0.12
PRPF8-208ENST00000573716 STXBP2Q15833 593 aa14.29□□□□□ -0.12
PRPF8-208ENST00000573716 HFE2Q6ZVN8 426 aa14.29□□□□□ -0.12
PRPF8-208ENST00000573716 NSUN6Q8TEA1 469 aaKnown RBP14.29□□□□□ -0.12
PRPF8-208ENST00000573716 TBC1D5Q92609 795 aa14.29□□□□□ -0.12
PRPF8-208ENST00000573716 PABPC5Q96DU9 382 aaKnown RBP14.29□□□□□ -0.12
PRPF8-208ENST00000573716 RMDN3Q96TC7 470 aa14.29□□□□□ -0.12
PRPF8-208ENST00000573716 MRVI1Q9Y6F6 885 aa14.29□□□□□ -0.12
PRPF8-208ENST00000573716 MYH6P13533 1939 aa14.29□□□□□ -0.12
PRPF8-208ENST00000573716 POTEB3A0JP26 581 aa14.28□□□□□ -0.12
PRPF8-208ENST00000573716 RSPH10B2B2RC85 870 aa14.28□□□□□ -0.12
PRPF8-208ENST00000573716 CSPG5O95196 566 aa14.28□□□□□ -0.12
PRPF8-208ENST00000573716 RSPH10BP0C881 870 aa14.28□□□□□ -0.12
PRPF8-208ENST00000573716 EIF2AK2P19525 551 aaKnown RBP14.28□□□□□ -0.12
PRPF8-208ENST00000573716 NOVP48745 357 aa14.28□□□□□ -0.12
PRPF8-208ENST00000573716 MYO7AQ13402 2215 aa14.28□□□□□ -0.12
PRPF8-208ENST00000573716 TRIM71Q2Q1W2 868 aaKnown RBP14.28□□□□□ -0.12
PRPF8-208ENST00000573716 ARHGEF16Q5VV41 709 aa14.28□□□□□ -0.12
PRPF8-208ENST00000573716 TTC41PQ6P2S7 1318 aa14.28□□□□□ -0.12
PRPF8-208ENST00000573716 TRAF7Q6Q0C0 670 aa14.28□□□□□ -0.12
PRPF8-208ENST00000573716 POTEBQ6S5H4 581 aa14.28□□□□□ -0.12
PRPF8-208ENST00000573716 EMSYQ7Z589 1322 aa14.28□□□□□ -0.12
PRPF8-208ENST00000573716 ADHFE1Q8IWW8 467 aa14.28□□□□□ -0.12
PRPF8-208ENST00000573716 TMEM192Q8IY95 271 aa14.28□□□□□ -0.12
PRPF8-208ENST00000573716 MIER1Q8N108 512 aa14.28□□□□□ -0.12
PRPF8-208ENST00000573716 SNX27Q96L92 541 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms