RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 CPT1AP50416 773 aa23.76■■□□□ 1.39
CHMP6-204ENST00000572778 TLE2Q04725 743 aa23.76■■□□□ 1.39
CHMP6-204ENST00000572778 STK3Q13188 491 aa23.76■■□□□ 1.39
CHMP6-204ENST00000572778 BRDTQ58F21 947 aaPredicted RBP23.76■■□□□ 1.39
CHMP6-204ENST00000572778 TYW1BQ6NUM6 668 aa23.76■■□□□ 1.39
CHMP6-204ENST00000572778 CHRDL2Q6WN34 429 aa23.76■■□□□ 1.39
CHMP6-204ENST00000572778 ZNF713Q8N859 430 aaPredicted RBP23.76■■□□□ 1.39
CHMP6-204ENST00000572778 PHKBQ93100 1093 aa23.76■■□□□ 1.39
CHMP6-204ENST00000572778 ZNF274Q96GC6 653 aaPredicted RBP23.76■■□□□ 1.39
CHMP6-204ENST00000572778 BARHL2Q9NY43 387 aa23.76■■□□□ 1.39
CHMP6-204ENST00000572778 PRKAG2Q9UGJ0 569 aa23.76■■□□□ 1.39
CHMP6-204ENST00000572778 STXBP3O00186 592 aa23.75■■□□□ 1.39
CHMP6-204ENST00000572778 PQBP1O60828 265 aaKnown RBP23.75■■□□□ 1.39
CHMP6-204ENST00000572778 CABYRO75952 493 aa23.75■■□□□ 1.39
CHMP6-204ENST00000572778 GH1P01241 217 aa23.75■■□□□ 1.39
CHMP6-204ENST00000572778 MYL3P08590 195 aa23.75■■□□□ 1.39
CHMP6-204ENST00000572778 PFKFB3Q16875 520 aaPredicted RBP23.75■■□□□ 1.39
CHMP6-204ENST00000572778 C8orf34Q49A92 452 aa23.75■■□□□ 1.39
CHMP6-204ENST00000572778 PPP1R18Q6NYC8 613 aa23.75■■□□□ 1.39
CHMP6-204ENST00000572778 DDX41Q9UJV9 622 aaKnown RBP23.75■■□□□ 1.39
CHMP6-204ENST00000572778 ALPK3Q96L96 1907 aa23.74■■□□□ 1.39
CHMP6-204ENST00000572778 A0A0U1RQG5 324 aaPredicted RBP23.74■■□□□ 1.39
CHMP6-204ENST00000572778 SMCO2A6NFE2 343 aa23.74■■□□□ 1.39
CHMP6-204ENST00000572778 SPDYE3A6NKU9 549 aa23.74■■□□□ 1.39
CHMP6-204ENST00000572778 PRPF3O43395 683 aaKnown RBP23.74■■□□□ 1.39
CHMP6-204ENST00000572778 RGS20O76081 388 aa23.74■■□□□ 1.39
CHMP6-204ENST00000572778 SCG2P13521 617 aa23.74■■□□□ 1.39
CHMP6-204ENST00000572778 NTRK3Q16288 839 aa23.74■■□□□ 1.39
CHMP6-204ENST00000572778 SLC26A6Q9BXS9 759 aa23.74■■□□□ 1.39
CHMP6-204ENST00000572778 RIC8AQ9NPQ8 531 aa23.74■■□□□ 1.39
CHMP6-204ENST00000572778 PRDM5Q9NQX1 630 aaPredicted RBP23.74■■□□□ 1.39
CHMP6-204ENST00000572778 POLR3EQ9NVU0 708 aa23.74■■□□□ 1.39
CHMP6-204ENST00000572778 RTEL1Q9NZ71 1219 aa23.74■■□□□ 1.39
CHMP6-204ENST00000572778 PCDH10Q9P2E7 1040 aa23.74■■□□□ 1.39
CHMP6-204ENST00000572778 RBM27Q9P2N5 1060 aaKnown RBP23.74■■□□□ 1.39
CHMP6-204ENST00000572778 COLQQ9Y215 455 aaPredicted RBP23.74■■□□□ 1.39
CHMP6-204ENST00000572778 FRMPD4Q14CM0 1322 aa23.74■■□□□ 1.39
CHMP6-204ENST00000572778 CPLX1O14810 134 aa23.73■■□□□ 1.39
CHMP6-204ENST00000572778 IFNAR1P17181 557 aa23.73■■□□□ 1.39
CHMP6-204ENST00000572778 ADCY7P51828 1080 aa23.73■■□□□ 1.39
CHMP6-204ENST00000572778 MRPS9P82933 396 aaKnown RBP23.73■■□□□ 1.39
CHMP6-204ENST00000572778 KCNV1Q6PIU1 500 aa23.73■■□□□ 1.39
CHMP6-204ENST00000572778 PCDHA6Q9UN73 950 aa23.73■■□□□ 1.39
CHMP6-204ENST00000572778 PCDHA8Q9Y5H6 950 aa23.73■■□□□ 1.39
CHMP6-204ENST00000572778 ARVCFO00192 962 aa23.72■■□□□ 1.39
CHMP6-204ENST00000572778 STAM2O75886 525 aa23.72■■□□□ 1.39
CHMP6-204ENST00000572778 ARHGAP1Q07960 439 aa23.72■■□□□ 1.39
CHMP6-204ENST00000572778 GNPTABQ3T906 1256 aa23.72■■□□□ 1.39
CHMP6-204ENST00000572778 PCNX4Q63HM2 1172 aa23.72■■□□□ 1.39
CHMP6-204ENST00000572778 AFG1LQ8WV93 481 aa23.72■■□□□ 1.39
CHMP6-204ENST00000572778 IL17RAQ96F46 866 aa23.72■■□□□ 1.39
CHMP6-204ENST00000572778 RNF26Q9BY78 433 aaPredicted RBP23.72■■□□□ 1.39
CHMP6-204ENST00000572778 ALDH8A1Q9H2A2 487 aaPredicted RBP23.72■■□□□ 1.39
CHMP6-204ENST00000572778 A6NJR5 290 aa23.71■■□□□ 1.39
CHMP6-204ENST00000572778 DCDC2CA8MYV0 355 aa23.71■■□□□ 1.39
CHMP6-204ENST00000572778 AK2P54819 239 aa23.71■■□□□ 1.39
CHMP6-204ENST00000572778 PSMC6P62333 389 aa23.71■■□□□ 1.39
CHMP6-204ENST00000572778 ANKRD1Q15327 319 aa23.71■■□□□ 1.39
CHMP6-204ENST00000572778 PKN1Q16512 942 aa23.71■■□□□ 1.39
CHMP6-204ENST00000572778 XRRA1Q6P2D8 792 aa23.71■■□□□ 1.39
CHMP6-204ENST00000572778 CPLX2Q6PUV4 134 aaKnown RBP23.71■■□□□ 1.39
CHMP6-204ENST00000572778 DHX37Q8IY37 1157 aaKnown RBP23.71■■□□□ 1.39
CHMP6-204ENST00000572778 EHMT1Q9H9B1 1298 aa23.71■■□□□ 1.39
CHMP6-204ENST00000572778 PDLIM7Q9NR12 457 aa23.71■■□□□ 1.39
CHMP6-204ENST00000572778 MROH7Q68CQ1 1323 aa23.7■■□□□ 1.38
CHMP6-204ENST00000572778 SORBS3O60504 671 aa23.7■■□□□ 1.38
CHMP6-204ENST00000572778 CLTBP09497 229 aa23.7■■□□□ 1.38
CHMP6-204ENST00000572778 TGFB3P10600 412 aa23.7■■□□□ 1.38
CHMP6-204ENST00000572778 MAGEA10P43363 369 aaPredicted RBP23.7■■□□□ 1.38
CHMP6-204ENST00000572778 CDK7P50613 346 aa23.7■■□□□ 1.38
CHMP6-204ENST00000572778 PURAQ00577 322 aaKnown RBP23.7■■□□□ 1.38
CHMP6-204ENST00000572778 SSRP1Q08945 709 aaKnown RBP23.7■■□□□ 1.38
CHMP6-204ENST00000572778 ITGA7Q13683 1181 aa23.7■■□□□ 1.38
CHMP6-204ENST00000572778 LAMC2Q13753 1193 aa23.7■■□□□ 1.38
CHMP6-204ENST00000572778 ANKRD33Q7Z3H0 272 aa23.7■■□□□ 1.38
CHMP6-204ENST00000572778 TRIM22Q8IYM9 498 aa23.7■■□□□ 1.38
CHMP6-204ENST00000572778 CCDC12Q8WUD4 166 aaPredicted RBP23.7■■□□□ 1.38
CHMP6-204ENST00000572778 TOX2Q96NM4 488 aa23.7■■□□□ 1.38
CHMP6-204ENST00000572778 INPP4AQ96PE3 977 aaPredicted RBP23.7■■□□□ 1.38
CHMP6-204ENST00000572778 MTG1Q9BT17 334 aaPredicted RBP23.7■■□□□ 1.38
CHMP6-204ENST00000572778 GLT8D2Q9H1C3 349 aa23.7■■□□□ 1.38
CHMP6-204ENST00000572778 SLKQ9H2G2 1235 aaPredicted RBP23.7■■□□□ 1.38
CHMP6-204ENST00000572778 TPCN1Q9ULQ1 816 aa23.7■■□□□ 1.38
CHMP6-204ENST00000572778 KPNA6O60684 536 aa23.69■■□□□ 1.38
CHMP6-204ENST00000572778 GGPS1O95749 300 aa23.69■■□□□ 1.38
CHMP6-204ENST00000572778 NEK4P51957 841 aa23.69■■□□□ 1.38
CHMP6-204ENST00000572778 MDM2Q00987 491 aaPredicted RBP23.69■■□□□ 1.38
CHMP6-204ENST00000572778 SH3RF1Q7Z6J0 888 aa23.69■■□□□ 1.38
CHMP6-204ENST00000572778 PGBD1Q96JS3 809 aa23.69■■□□□ 1.38
CHMP6-204ENST00000572778 LBHD1Q9BQE6 289 aaPredicted RBP23.69■■□□□ 1.38
CHMP6-204ENST00000572778 TMEM39AQ9NV64 488 aa23.69■■□□□ 1.38
CHMP6-204ENST00000572778 FOSP01100 380 aaPredicted RBP23.68■■□□□ 1.38
CHMP6-204ENST00000572778 MMP3P08254 477 aa23.68■■□□□ 1.38
CHMP6-204ENST00000572778 SP2Q02086 613 aa23.68■■□□□ 1.38
CHMP6-204ENST00000572778 FAAP100Q0VG06 881 aa23.68■■□□□ 1.38
CHMP6-204ENST00000572778 NLRX1Q86UT6 975 aa23.68■■□□□ 1.38
CHMP6-204ENST00000572778 TEX2Q8IWB9 1127 aa23.68■■□□□ 1.38
CHMP6-204ENST00000572778 GDF15Q99988 308 aa23.68■■□□□ 1.38
CHMP6-204ENST00000572778 C6orf50Q9HD87 102 aa23.68■■□□□ 1.38
CHMP6-204ENST00000572778 TMEM260Q9NX78 707 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms