RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 ARHGAP4P98171 946 aa16.55■□□□□ 0.24
NPLOC4-209ENST00000572760 NR5A1Q13285 461 aa16.55■□□□□ 0.24
NPLOC4-209ENST00000572760 NPY5RQ15761 445 aa16.55■□□□□ 0.24
NPLOC4-209ENST00000572760 GNPTABQ3T906 1256 aa16.55■□□□□ 0.24
NPLOC4-209ENST00000572760 PCNX4Q63HM2 1172 aa16.55■□□□□ 0.24
NPLOC4-209ENST00000572760 SEPT14Q6ZU15 432 aa16.55■□□□□ 0.24
NPLOC4-209ENST00000572760 PIK3AP1Q6ZUJ8 805 aa16.55■□□□□ 0.24
NPLOC4-209ENST00000572760 NLRX1Q86UT6 975 aa16.55■□□□□ 0.24
NPLOC4-209ENST00000572760 ARMC5Q96C12 935 aa16.55■□□□□ 0.24
NPLOC4-209ENST00000572760 RTEL1Q9NZ71 1219 aa16.55■□□□□ 0.24
NPLOC4-209ENST00000572760 DOCK5Q9H7D0 1870 aa16.54■□□□□ 0.24
NPLOC4-209ENST00000572760 VPS37CA5D8V6 355 aaPredicted RBP16.54■□□□□ 0.24
NPLOC4-209ENST00000572760 M0R2N6 131 aa16.54■□□□□ 0.24
NPLOC4-209ENST00000572760 STAM2O75886 525 aa16.54■□□□□ 0.24
NPLOC4-209ENST00000572760 IGHA2P01877 340 aa16.54■□□□□ 0.24
NPLOC4-209ENST00000572760 CYBAP13498 195 aa16.54■□□□□ 0.24
NPLOC4-209ENST00000572760 CCL5P13501 91 aa16.54■□□□□ 0.24
NPLOC4-209ENST00000572760 CCND3P30281 292 aaPredicted RBP16.54■□□□□ 0.24
NPLOC4-209ENST00000572760 MTFR1Q15390 333 aa16.54■□□□□ 0.24
NPLOC4-209ENST00000572760 MAP3K21Q5TCX8 1036 aa16.54■□□□□ 0.24
NPLOC4-209ENST00000572760 TBCKQ8TEA7 893 aa16.54■□□□□ 0.24
NPLOC4-209ENST00000572760 ZNF333Q96JL9 665 aa16.54■□□□□ 0.24
NPLOC4-209ENST00000572760 RNF208Q9H0X6 261 aa16.54■□□□□ 0.24
NPLOC4-209ENST00000572760 UNC93B1Q9H1C4 597 aa16.54■□□□□ 0.24
NPLOC4-209ENST00000572760 FOXP1Q9H334 677 aaPredicted RBP16.54■□□□□ 0.24
NPLOC4-209ENST00000572760 FAM184BQ9ULE4 1060 aa16.54■□□□□ 0.24
NPLOC4-209ENST00000572760 ZNF865P0CJ78 1059 aaPredicted RBP16.53■□□□□ 0.24
NPLOC4-209ENST00000572760 AKR1A1P14550 325 aa16.53■□□□□ 0.24
NPLOC4-209ENST00000572760 TTLL4Q14679 1199 aa16.53■□□□□ 0.24
NPLOC4-209ENST00000572760 INF2Q27J81 1249 aa16.53■□□□□ 0.24
NPLOC4-209ENST00000572760 CCDC144BQ3MJ40 725 aa16.53■□□□□ 0.24
NPLOC4-209ENST00000572760 TNS4Q8IZW8 715 aa16.53■□□□□ 0.24
NPLOC4-209ENST00000572760 TRPV1Q8NER1 839 aa16.53■□□□□ 0.24
NPLOC4-209ENST00000572760 SCFD2Q8WU76 684 aa16.53■□□□□ 0.24
NPLOC4-209ENST00000572760 TMEM106CQ9BVX2 250 aa16.53■□□□□ 0.24
NPLOC4-209ENST00000572760 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.53■□□□□ 0.24
NPLOC4-209ENST00000572760 MRVI1Q9Y6F6 885 aa16.53■□□□□ 0.24
NPLOC4-209ENST00000572760 FRMPD3Q5JV73 1810 aa16.52■□□□□ 0.24
NPLOC4-209ENST00000572760 SEPT4O43236 478 aa16.52■□□□□ 0.24
NPLOC4-209ENST00000572760 SYT1P21579 422 aa16.52■□□□□ 0.24
NPLOC4-209ENST00000572760 ADCYAP1R1P41586 468 aa16.52■□□□□ 0.24
NPLOC4-209ENST00000572760 USP11P51784 963 aa16.52■□□□□ 0.24
NPLOC4-209ENST00000572760 MRPS9P82933 396 aaKnown RBP16.52■□□□□ 0.24
NPLOC4-209ENST00000572760 IQSEC1Q6DN90 963 aa16.52■□□□□ 0.24
NPLOC4-209ENST00000572760 WDR11Q9BZH6 1224 aa16.52■□□□□ 0.24
NPLOC4-209ENST00000572760 KATNBL1Q9H079 304 aa16.52■□□□□ 0.24
NPLOC4-209ENST00000572760 PDGFCQ9NRA1 345 aa16.52■□□□□ 0.24
NPLOC4-209ENST00000572760 TSHZ2Q9NRE2 1034 aa16.52■□□□□ 0.24
NPLOC4-209ENST00000572760 MSCO60682 206 aa16.51■□□□□ 0.23
NPLOC4-209ENST00000572760 CYP3A4P08684 503 aa16.51■□□□□ 0.23
NPLOC4-209ENST00000572760 TXNP10599 105 aaKnown RBP16.51■□□□□ 0.23
NPLOC4-209ENST00000572760 ATP2B1P20020 1258 aa16.51■□□□□ 0.23
NPLOC4-209ENST00000572760 TNFAIP2Q03169 654 aa16.51■□□□□ 0.23
NPLOC4-209ENST00000572760 LETM2Q2VYF4 491 aa16.51■□□□□ 0.23
NPLOC4-209ENST00000572760 ANO1Q5XXA6 986 aa16.51■□□□□ 0.23
NPLOC4-209ENST00000572760 TAPT1Q6NXT6 567 aa16.51■□□□□ 0.23
NPLOC4-209ENST00000572760 KCNV1Q6PIU1 500 aa16.51■□□□□ 0.23
NPLOC4-209ENST00000572760 NEK8Q86SG6 692 aa16.51■□□□□ 0.23
NPLOC4-209ENST00000572760 CDHR1Q96JP9 859 aa16.51■□□□□ 0.23
NPLOC4-209ENST00000572760 NAP1L4Q99733 375 aaKnown RBP16.51■□□□□ 0.23
NPLOC4-209ENST00000572760 MXRA8Q9BRK3 442 aa16.51■□□□□ 0.23
NPLOC4-209ENST00000572760 DDX20Q9UHI6 824 aaKnown RBP16.51■□□□□ 0.23
NPLOC4-209ENST00000572760 NOL7Q9UMY1 257 aaKnown RBP16.51■□□□□ 0.23
NPLOC4-209ENST00000572760 FIBPO43427 364 aa16.5■□□□□ 0.23
NPLOC4-209ENST00000572760 STX6O43752 255 aa16.5■□□□□ 0.23
NPLOC4-209ENST00000572760 RARBP10826 455 aa16.5■□□□□ 0.23
NPLOC4-209ENST00000572760 PDIA4P13667 645 aaKnown RBP16.5■□□□□ 0.23
NPLOC4-209ENST00000572760 CEP55Q53EZ4 464 aa16.5■□□□□ 0.23
NPLOC4-209ENST00000572760 EARS2Q5JPH6 523 aaKnown RBP16.5■□□□□ 0.23
NPLOC4-209ENST00000572760 PLA2G4DQ86XP0 818 aa16.5■□□□□ 0.23
NPLOC4-209ENST00000572760 NOSTRINQ8IVI9 506 aa16.5■□□□□ 0.23
NPLOC4-209ENST00000572760 TNFRSF25Q93038 417 aa16.5■□□□□ 0.23
NPLOC4-209ENST00000572760 GPRASP2Q96D09 838 aa16.5■□□□□ 0.23
NPLOC4-209ENST00000572760 INPP4AQ96PE3 977 aaPredicted RBP16.5■□□□□ 0.23
NPLOC4-209ENST00000572760 DEFB118Q96PH6 123 aa16.5■□□□□ 0.23
NPLOC4-209ENST00000572760 JADE2Q9NQC1 790 aa16.5■□□□□ 0.23
NPLOC4-209ENST00000572760 RBM19Q9Y4C8 960 aaKnown RBP16.5■□□□□ 0.23
NPLOC4-209ENST00000572760 UBIAD1Q9Y5Z9 338 aa16.5■□□□□ 0.23
NPLOC4-209ENST00000572760 RBM47A0AV96 593 aaKnown RBP16.49■□□□□ 0.23
NPLOC4-209ENST00000572760 FAM205CA6NFA0 338 aa16.49■□□□□ 0.23
NPLOC4-209ENST00000572760 KIF28PB7ZC32 967 aa16.49■□□□□ 0.23
NPLOC4-209ENST00000572760 MYCNP04198 464 aaPredicted RBP16.49■□□□□ 0.23
NPLOC4-209ENST00000572760 ITGB5P18084 799 aa16.49■□□□□ 0.23
NPLOC4-209ENST00000572760 MTMR1Q13613 665 aa16.49■□□□□ 0.23
NPLOC4-209ENST00000572760 PRR16Q569H4 304 aa16.49■□□□□ 0.23
NPLOC4-209ENST00000572760 CRYGNQ8WXF5 182 aa16.49■□□□□ 0.23
NPLOC4-209ENST00000572760 ABHD8Q96I13 439 aa16.49■□□□□ 0.23
NPLOC4-209ENST00000572760 AP5M1Q9H0R1 490 aa16.49■□□□□ 0.23
NPLOC4-209ENST00000572760 SPC25Q9HBM1 224 aa16.49■□□□□ 0.23
NPLOC4-209ENST00000572760 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.48■□□□□ 0.23
NPLOC4-209ENST00000572760 NKRFO15226 690 aaKnown RBP eCLIP16.48■□□□□ 0.23
NPLOC4-209ENST00000572760 MAFGO15525 162 aa16.48■□□□□ 0.23
NPLOC4-209ENST00000572760 MARCH6O60337 910 aa16.48■□□□□ 0.23
NPLOC4-209ENST00000572760 CCNT1O60563 726 aaKnown RBP16.48■□□□□ 0.23
NPLOC4-209ENST00000572760 DUSP11O75319 330 aaKnown RBP16.48■□□□□ 0.23
NPLOC4-209ENST00000572760 RGS20O76081 388 aa16.48■□□□□ 0.23
NPLOC4-209ENST00000572760 GJB1P08034 283 aa16.48■□□□□ 0.23
NPLOC4-209ENST00000572760 TGFB3P10600 412 aa16.48■□□□□ 0.23
NPLOC4-209ENST00000572760 SMPD1P17405 629 aa16.48■□□□□ 0.23
NPLOC4-209ENST00000572760 U2AF2P26368 475 aaKnown RBP eCLIP16.48■□□□□ 0.236e-21■■□□□ 11.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms