RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 PALM3A6NDB9 673 aaPredicted RBP17.95■□□□□ 0.46
RAB40B-206ENST00000571995 CCDC169A6NNP5 214 aa17.95■□□□□ 0.46
RAB40B-206ENST00000571995 TACC1O75410 805 aa17.95■□□□□ 0.46
RAB40B-206ENST00000571995 C2orf54Q08AI8 447 aa17.95■□□□□ 0.46
RAB40B-206ENST00000571995 C16orf86Q6ZW13 317 aa17.95■□□□□ 0.46
RAB40B-206ENST00000571995 ADSSL1Q8N142 457 aa17.95■□□□□ 0.46
RAB40B-206ENST00000571995 CYP2W1Q8TAV3 490 aa17.95■□□□□ 0.46
RAB40B-206ENST00000571995 SECISBP2LQ93073 1101 aaKnown RBP17.95■□□□□ 0.46
RAB40B-206ENST00000571995 FAM212AQ96EL1 285 aa17.95■□□□□ 0.46
RAB40B-206ENST00000571995 MASTLQ96GX5 879 aa17.95■□□□□ 0.46
RAB40B-206ENST00000571995 ANO3Q9BYT9 981 aa17.95■□□□□ 0.46
RAB40B-206ENST00000571995 EHD2Q9NZN4 543 aa17.95■□□□□ 0.46
RAB40B-206ENST00000571995 EFCAB8A8MWE9 144 aa17.94■□□□□ 0.46
RAB40B-206ENST00000571995 ASPRV1Q53RT3 343 aa17.94■□□□□ 0.46
RAB40B-206ENST00000571995 UTP14CQ5TAP6 766 aaKnown RBP17.94■□□□□ 0.46
RAB40B-206ENST00000571995 TTC19Q6DKK2 380 aaPredicted RBP17.94■□□□□ 0.46
RAB40B-206ENST00000571995 KCNK18Q7Z418 384 aa17.94■□□□□ 0.46
RAB40B-206ENST00000571995 KLHL7Q8IXQ5 586 aa17.94■□□□□ 0.46
RAB40B-206ENST00000571995 CDC23Q9UJX2 597 aa17.94■□□□□ 0.46
RAB40B-206ENST00000571995 PNMA6FA0A0J9YX94 578 aa17.94■□□□□ 0.46
RAB40B-206ENST00000571995 GAS7O60861 476 aa17.94■□□□□ 0.46
RAB40B-206ENST00000571995 FTCDO95954 541 aa17.94■□□□□ 0.46
RAB40B-206ENST00000571995 GJC1P36383 396 aa17.94■□□□□ 0.46
RAB40B-206ENST00000571995 TRIM65Q6PJ69 517 aa17.94■□□□□ 0.46
RAB40B-206ENST00000571995 AMNQ9BXJ7 453 aa17.94■□□□□ 0.46
RAB40B-206ENST00000571995 CETN3O15182 167 aa17.94■□□□□ 0.46
RAB40B-206ENST00000571995 PPP1R12BO60237 982 aaPredicted RBP17.94■□□□□ 0.46
RAB40B-206ENST00000571995 BMP3P12645 472 aa17.94■□□□□ 0.46
RAB40B-206ENST00000571995 PRMT6Q96LA8 375 aaPredicted RBP17.94■□□□□ 0.46
RAB40B-206ENST00000571995 NDST4Q9H3R1 872 aa17.94■□□□□ 0.46
RAB40B-206ENST00000571995 GOLPH3Q9H4A6 298 aa17.94■□□□□ 0.46
RAB40B-206ENST00000571995 DDX41Q9UJV9 622 aaKnown RBP17.94■□□□□ 0.46
RAB40B-206ENST00000571995 SAR1BQ9Y6B6 198 aa17.94■□□□□ 0.46
RAB40B-206ENST00000571995 PDE4DIPQ5VU43 2346 aa17.94■□□□□ 0.46
RAB40B-206ENST00000571995 ANKRD65E5RJM6 399 aa17.93■□□□□ 0.46
RAB40B-206ENST00000571995 NAA35Q5VZE5 725 aa17.93■□□□□ 0.46
RAB40B-206ENST00000571995 TBC1D5Q92609 795 aa17.93■□□□□ 0.46
RAB40B-206ENST00000571995 ATP6V0A2Q9Y487 856 aa17.93■□□□□ 0.46
RAB40B-206ENST00000571995 PHLPP2Q6ZVD8 1323 aa17.93■□□□□ 0.46
RAB40B-206ENST00000571995 PLA2G4BP0C869 781 aa17.93■□□□□ 0.46
RAB40B-206ENST00000571995 NR2F2P24468 414 aa17.93■□□□□ 0.46
RAB40B-206ENST00000571995 FAM133AQ8N9E0 248 aa17.93■□□□□ 0.46
RAB40B-206ENST00000571995 BICD1Q96G01 975 aa17.93■□□□□ 0.46
RAB40B-206ENST00000571995 ARHGEF10LQ9HCE6 1279 aa17.93■□□□□ 0.46
RAB40B-206ENST00000571995 LGALS16A8MUM7 142 aa17.93■□□□□ 0.46
RAB40B-206ENST00000571995 ZBTB5O15062 677 aa17.93■□□□□ 0.46
RAB40B-206ENST00000571995 EIF3JO75822 258 aaKnown RBP17.93■□□□□ 0.46
RAB40B-206ENST00000571995 RCAN1P53805 252 aa17.93■□□□□ 0.46
RAB40B-206ENST00000571995 LONRF2Q1L5Z9 754 aa17.93■□□□□ 0.46
RAB40B-206ENST00000571995 SMAP1Q8IYB5 467 aaPredicted RBP17.93■□□□□ 0.46
RAB40B-206ENST00000571995 NOA1Q8NC60 698 aaKnown RBP17.93■□□□□ 0.46
RAB40B-206ENST00000571995 ACER1Q8TDN7 264 aa17.93■□□□□ 0.46
RAB40B-206ENST00000571995 ALS2CR12Q96Q35 445 aa17.93■□□□□ 0.46
RAB40B-206ENST00000571995 PANX2Q96RD6 677 aa17.93■□□□□ 0.46
RAB40B-206ENST00000571995 ADAMTS1Q9UHI8 967 aa17.93■□□□□ 0.46
RAB40B-206ENST00000571995 ALS2Q96Q42 1657 aa17.93■□□□□ 0.46
RAB40B-206ENST00000571995 TADA3O75528 432 aa17.92■□□□□ 0.46
RAB40B-206ENST00000571995 ATP1A1P05023 1023 aaKnown RBP17.92■□□□□ 0.46
RAB40B-206ENST00000571995 GFPT1Q06210 699 aaPredicted RBP17.92■□□□□ 0.46
RAB40B-206ENST00000571995 NAALADL2Q58DX5 795 aa17.92■□□□□ 0.46
RAB40B-206ENST00000571995 TMED8Q6PL24 325 aaPredicted RBP17.92■□□□□ 0.46
RAB40B-206ENST00000571995 CCDC127Q96BQ5 260 aa17.92■□□□□ 0.46
RAB40B-206ENST00000571995 MTA3Q9BTC8 594 aa17.92■□□□□ 0.46
RAB40B-206ENST00000571995 GOPCQ9HD26 462 aa17.92■□□□□ 0.46
RAB40B-206ENST00000571995 BACH1O14867 736 aa17.92■□□□□ 0.46
RAB40B-206ENST00000571995 NKRFO15226 690 aaKnown RBP eCLIP17.92■□□□□ 0.46
RAB40B-206ENST00000571995 KLHL30Q0D2K2 578 aa17.92■□□□□ 0.46
RAB40B-206ENST00000571995 PDGFDQ9GZP0 370 aaPredicted RBP17.92■□□□□ 0.46
RAB40B-206ENST00000571995 TMEM39BQ9GZU3 492 aa17.92■□□□□ 0.46
RAB40B-206ENST00000571995 MYH2Q9UKX2 1941 aa17.92■□□□□ 0.46
RAB40B-206ENST00000571995 LRRN2O75325 713 aa17.92■□□□□ 0.46
RAB40B-206ENST00000571995 SRGAP1Q7Z6B7 1085 aa17.92■□□□□ 0.46
RAB40B-206ENST00000571995 PHLDB2Q86SQ0 1253 aa17.92■□□□□ 0.46
RAB40B-206ENST00000571995 GTPBP4Q9BZE4 634 aaKnown RBP17.92■□□□□ 0.46
RAB40B-206ENST00000571995 ABCB6Q9NP58 842 aa17.92■□□□□ 0.46
RAB40B-206ENST00000571995 PHRF1Q9P1Y6 1649 aaKnown RBP17.91■□□□□ 0.46
RAB40B-206ENST00000571995 FLOT1O75955 427 aa17.91■□□□□ 0.46
RAB40B-206ENST00000571995 EIF2AK2P19525 551 aaKnown RBP17.91■□□□□ 0.46
RAB40B-206ENST00000571995 RHBDL3P58872 404 aa17.91■□□□□ 0.46
RAB40B-206ENST00000571995 ZNF543Q08ER8 600 aa17.91■□□□□ 0.46
RAB40B-206ENST00000571995 SP8Q8IXZ3 490 aa17.91■□□□□ 0.46
RAB40B-206ENST00000571995 LUC7LQ9NQ29 371 aaKnown RBP17.91■□□□□ 0.46
RAB40B-206ENST00000571995 LRRC53A6NM62 1247 aa17.91■□□□□ 0.46
RAB40B-206ENST00000571995 RXRBP28702 533 aa17.91■□□□□ 0.46
RAB40B-206ENST00000571995 GPATCH4Q5T3I0 446 aaKnown RBP17.91■□□□□ 0.46
RAB40B-206ENST00000571995 LACRTQ9GZZ8 138 aa17.91■□□□□ 0.46
RAB40B-206ENST00000571995 ZMYND12Q9H0C1 365 aa17.91■□□□□ 0.46
RAB40B-206ENST00000571995 HYOU1Q9Y4L1 999 aa17.91■□□□□ 0.46
RAB40B-206ENST00000571995 SMIM23A6NLE4 172 aa17.91■□□□□ 0.46
RAB40B-206ENST00000571995 CAPN2P17655 700 aa17.91■□□□□ 0.46
RAB40B-206ENST00000571995 EHHADHQ08426 723 aa17.91■□□□□ 0.46
RAB40B-206ENST00000571995 EEPD1Q7L9B9 569 aa17.91■□□□□ 0.46
RAB40B-206ENST00000571995 EZH2Q15910 746 aaKnown RBP17.9■□□□□ 0.46
RAB40B-206ENST00000571995 E2F4Q16254 413 aa17.9■□□□□ 0.46
RAB40B-206ENST00000571995 CC2D2BQ6DHV5 1058 aa17.9■□□□□ 0.46
RAB40B-206ENST00000571995 LEKR1Q6ZMV7 388 aa17.9■□□□□ 0.46
RAB40B-206ENST00000571995 NDUFB10O96000 172 aa17.9■□□□□ 0.46
RAB40B-206ENST00000571995 ACTN1P12814 892 aa17.9■□□□□ 0.46
RAB40B-206ENST00000571995 ARHGAP4P98171 946 aa17.9■□□□□ 0.46
RAB40B-206ENST00000571995 TNIP1Q15025 636 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms