RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 CLEC4DQ8WXI8 215 aa13.35□□□□□ -0.27
CHMP6-202ENST00000571457 DHX38Q92620 1227 aaKnown RBP13.35□□□□□ -0.27
CHMP6-202ENST00000571457 SNX27Q96L92 541 aa13.35□□□□□ -0.27
CHMP6-202ENST00000571457 MFSD14AQ96MC6 490 aa13.35□□□□□ -0.27
CHMP6-202ENST00000571457 KATNAL1Q9BW62 490 aa13.35□□□□□ -0.27
CHMP6-202ENST00000571457 GTF2IRD1Q9UHL9 959 aa13.35□□□□□ -0.27
CHMP6-202ENST00000571457 EMSYQ7Z589 1322 aa13.35□□□□□ -0.27
CHMP6-202ENST00000571457 WDR19Q8NEZ3 1342 aa13.35□□□□□ -0.27
CHMP6-202ENST00000571457 CACNA1HO95180 2353 aa13.35□□□□□ -0.27
CHMP6-202ENST00000571457 ZFHX2Q9C0A1 2572 aaPredicted RBP13.34□□□□□ -0.27
CHMP6-202ENST00000571457 MYO7AQ13402 2215 aa13.34□□□□□ -0.27
CHMP6-202ENST00000571457 H3BQ06 376 aaPredicted RBP13.34□□□□□ -0.27
CHMP6-202ENST00000571457 TOP1P11387 765 aaKnown RBP13.34□□□□□ -0.27
CHMP6-202ENST00000571457 NOVP48745 357 aa13.34□□□□□ -0.27
CHMP6-202ENST00000571457 PTK7Q13308 1070 aa13.34□□□□□ -0.27
CHMP6-202ENST00000571457 DGKDQ16760 1214 aa13.34□□□□□ -0.27
CHMP6-202ENST00000571457 CCDC62Q6P9F0 684 aa13.34□□□□□ -0.27
CHMP6-202ENST00000571457 RASGRP2Q7LDG7 609 aa13.34□□□□□ -0.27
CHMP6-202ENST00000571457 BANK1Q8NDB2 785 aa13.34□□□□□ -0.27
CHMP6-202ENST00000571457 RGS22Q8NE09 1264 aa13.34□□□□□ -0.27
CHMP6-202ENST00000571457 KAT2BQ92831 832 aa13.34□□□□□ -0.27
CHMP6-202ENST00000571457 PABPC5Q96DU9 382 aaKnown RBP13.34□□□□□ -0.27
CHMP6-202ENST00000571457 C17orf80Q9BSJ5 609 aa13.34□□□□□ -0.27
CHMP6-202ENST00000571457 MAF1Q9H063 256 aa13.34□□□□□ -0.27
CHMP6-202ENST00000571457 SPTBN4Q9H254 2564 aa13.33□□□□□ -0.27
CHMP6-202ENST00000571457 NCK2O43639 380 aa13.33□□□□□ -0.28
CHMP6-202ENST00000571457 LGR5O75473 907 aa13.33□□□□□ -0.28
CHMP6-202ENST00000571457 ARIH2O95376 493 aa13.33□□□□□ -0.28
CHMP6-202ENST00000571457 HTRA4P83105 476 aaPredicted RBP13.33□□□□□ -0.28
CHMP6-202ENST00000571457 HNRNPUQ00839 825 aaKnown RBP eCLIP13.33□□□□□ -0.28
CHMP6-202ENST00000571457 ZP2Q05996 745 aa13.33□□□□□ -0.28
CHMP6-202ENST00000571457 EP400NLQ6ZTU2 488 aa13.33□□□□□ -0.28
CHMP6-202ENST00000571457 ADHFE1Q8IWW8 467 aa13.33□□□□□ -0.28
CHMP6-202ENST00000571457 SP7Q8TDD2 431 aaPredicted RBP13.33□□□□□ -0.28
CHMP6-202ENST00000571457 POP1Q99575 1024 aaKnown RBP13.33□□□□□ -0.28
CHMP6-202ENST00000571457 GPCPD1Q9NPB8 672 aa13.33□□□□□ -0.28
CHMP6-202ENST00000571457 HDAC6Q9UBN7 1215 aa13.33□□□□□ -0.28
CHMP6-202ENST00000571457 C19orf67A6NJJ6 358 aa13.32□□□□□ -0.28
CHMP6-202ENST00000571457 H3BNC9 293 aa13.32□□□□□ -0.28
CHMP6-202ENST00000571457 ORC4O43929 436 aa13.32□□□□□ -0.28
CHMP6-202ENST00000571457 PSEN2P49810 448 aa13.32□□□□□ -0.28
CHMP6-202ENST00000571457 CTDSPL2Q05D32 466 aa13.32□□□□□ -0.28
CHMP6-202ENST00000571457 ARHGAP1Q07960 439 aa13.32□□□□□ -0.28
CHMP6-202ENST00000571457 LY6KQ17RY6 165 aa13.32□□□□□ -0.28
CHMP6-202ENST00000571457 TCTN1Q2MV58 587 aa13.32□□□□□ -0.28
CHMP6-202ENST00000571457 EPC2Q52LR7 807 aa13.32□□□□□ -0.28
CHMP6-202ENST00000571457 CHST3Q7LGC8 479 aa13.32□□□□□ -0.28
CHMP6-202ENST00000571457 MYOCDQ8IZQ8 938 aa13.32□□□□□ -0.28
CHMP6-202ENST00000571457 SEC62Q99442 399 aaKnown RBP13.32□□□□□ -0.28
CHMP6-202ENST00000571457 ANAPC4Q9UJX5 808 aa13.32□□□□□ -0.28
CHMP6-202ENST00000571457 FRMPD2Q68DX3 1309 aaPredicted RBP13.32□□□□□ -0.28
CHMP6-202ENST00000571457 MICAL3Q7RTP6 2002 aa13.32□□□□□ -0.28
CHMP6-202ENST00000571457 GPM6BQ13491 265 aa13.31□□□□□ -0.28
CHMP6-202ENST00000571457 COL19A1Q14993 1142 aa13.31□□□□□ -0.28
CHMP6-202ENST00000571457 STXBP2Q15833 593 aa13.31□□□□□ -0.28
CHMP6-202ENST00000571457 TRIM71Q2Q1W2 868 aaKnown RBP13.31□□□□□ -0.28
CHMP6-202ENST00000571457 TCEAL5Q5H9L2 206 aa13.31□□□□□ -0.28
CHMP6-202ENST00000571457 ZMYM1Q5SVZ6 1142 aa13.31□□□□□ -0.28
CHMP6-202ENST00000571457 ZNF618Q5T7W0 954 aa13.31□□□□□ -0.28
CHMP6-202ENST00000571457 TSHZ3Q63HK5 1081 aa13.31□□□□□ -0.28
CHMP6-202ENST00000571457 SEPT14Q6ZU15 432 aa13.31□□□□□ -0.28
CHMP6-202ENST00000571457 HFE2Q6ZVN8 426 aa13.31□□□□□ -0.28
CHMP6-202ENST00000571457 NSUN6Q8TEA1 469 aaKnown RBP13.31□□□□□ -0.28
CHMP6-202ENST00000571457 EMID1Q96A84 441 aaPredicted RBP13.31□□□□□ -0.28
CHMP6-202ENST00000571457 IWS1Q96ST2 819 aa13.31□□□□□ -0.28
CHMP6-202ENST00000571457 YME1L1Q96TA2 773 aa13.31□□□□□ -0.28
CHMP6-202ENST00000571457 TMEM47Q9BQJ4 181 aa13.31□□□□□ -0.28
CHMP6-202ENST00000571457 FSD1Q9BTV5 496 aa13.31□□□□□ -0.28
CHMP6-202ENST00000571457 NSUN3Q9H649 340 aaKnown RBP13.31□□□□□ -0.28
CHMP6-202ENST00000571457 F2P00734 622 aa13.3□□□□□ -0.28
CHMP6-202ENST00000571457 PDHBP11177 359 aa13.3□□□□□ -0.28
CHMP6-202ENST00000571457 LAMC2Q13753 1193 aa13.3□□□□□ -0.28
CHMP6-202ENST00000571457 MFSD10Q14728 455 aa13.3□□□□□ -0.28
CHMP6-202ENST00000571457 KIAA0753Q2KHM9 967 aa13.3□□□□□ -0.28
CHMP6-202ENST00000571457 TRAF7Q6Q0C0 670 aa13.3□□□□□ -0.28
CHMP6-202ENST00000571457 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.3□□□□□ -0.28
CHMP6-202ENST00000571457 DHX37Q8IY37 1157 aaKnown RBP13.3□□□□□ -0.28
CHMP6-202ENST00000571457 DBF4BQ8NFT6 615 aa13.3□□□□□ -0.28
CHMP6-202ENST00000571457 PPTC7Q8NI37 304 aa13.3□□□□□ -0.28
CHMP6-202ENST00000571457 PRRX2Q99811 253 aa13.3□□□□□ -0.28
CHMP6-202ENST00000571457 ALG1Q9BT22 464 aa13.3□□□□□ -0.28
CHMP6-202ENST00000571457 INCENPQ9NQS7 918 aa13.3□□□□□ -0.28
CHMP6-202ENST00000571457 TOMM22Q9NS69 142 aa13.3□□□□□ -0.28
CHMP6-202ENST00000571457 TCP11L1Q9NUJ3 509 aa13.3□□□□□ -0.28
CHMP6-202ENST00000571457 CLDND1Q9NY35 253 aa13.3□□□□□ -0.28
CHMP6-202ENST00000571457 PTPRZ1P23471 2315 aaPredicted RBP13.3□□□□□ -0.28
CHMP6-202ENST00000571457 RSPH10B2B2RC85 870 aa13.29□□□□□ -0.28
CHMP6-202ENST00000571457 HAS3O00219 553 aa13.29□□□□□ -0.28
CHMP6-202ENST00000571457 FGRP09769 529 aa13.29□□□□□ -0.28
CHMP6-202ENST00000571457 RSPH10BP0C881 870 aa13.29□□□□□ -0.28
CHMP6-202ENST00000571457 ZNF543Q08ER8 600 aa13.29□□□□□ -0.28
CHMP6-202ENST00000571457 MBTPS1Q14703 1052 aa13.29□□□□□ -0.28
CHMP6-202ENST00000571457 PKN1Q16512 942 aa13.29□□□□□ -0.28
CHMP6-202ENST00000571457 USH1GQ495M9 461 aa13.29□□□□□ -0.28
CHMP6-202ENST00000571457 HERC4Q5GLZ8 1057 aaPredicted RBP13.29□□□□□ -0.28
CHMP6-202ENST00000571457 GPATCH4Q5T3I0 446 aaKnown RBP13.29□□□□□ -0.28
CHMP6-202ENST00000571457 FBXO11Q86XK2 927 aa13.29□□□□□ -0.28
CHMP6-202ENST00000571457 MCF2L2Q86YR7 1114 aa13.29□□□□□ -0.28
CHMP6-202ENST00000571457 TMEM192Q8IY95 271 aa13.29□□□□□ -0.28
CHMP6-202ENST00000571457 DDX41Q9UJV9 622 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms